Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is 146301545
Identifier: 146301545
GI number: 146301545
Start: 4514967
End: 4516094
Strand: Direct
Name: 146301545
Synonym: Fjoh_3806
Alternate gene names: NA
Gene position: 4514967-4516094 (Clockwise)
Preceding gene: 146301544
Following gene: 146301546
Centisome position: 74.05
GC content: 36.08
Gene sequence:
>1128_bases ATGAAGATCAATGCAGATGTATTAATTATTGGCGGCGGACTCGCAGGTTTGACAGCGGCTATACACCTGTCTCAAAAAAA TCTAAAAGTAATTCTTATCGAAAAATCTAATTTCCCCAGACATAAGGTCTGTGGTGAATATATTTCCAATGAAATTTTAC CTTACCTAACTTGGCTTGGCGCCGATGTTACAGAACTTAATCCCTCCAGCATTTCCAAATTTGAATTCACTGCAAGTAAT GGAAAAACGGCAATGGTAGAACTTCCTCTGGGAGGATTCGGCATAAGCAGGTACGCCCTTGATGATTTTTTATATCAAAA AGCAATAGCAAACCACTGTTTGATAATAAAAGAAAATGTTATTGATGTTTCATTCAGTGATGACCTGTTTACTGTTACTT CTTCAAATCAAATTTTAACGGCTAAAATTGTATTGGGTGCATTTGGCAAACGTTCCAATTTAGATCAGGCTTTAGATCGC AGCTTCTTCCATAAAAAATCACCTTGGCTGGCTGTAAAAGCCCATTATTCGGGTAATTTAGAGGATGATCTTGTTGCATT GCATAACTTTAAAGGCGGCTACTGTGGTGTTGCTAAAGTAGAAAACAATATTATAAACATTTGTTATCTGGCAGATTATG CCACTTTCAAACAATACAAAAATATTCAGGATTACCAGGAGGGTGTACTTTACAAAAACAAACATCTTAAAGCTGTTTTT GAAAACAGTATGCTTCTTTTTGAAAAACCCCTTACAATAAGCCAGATTTCTTTTGAGAAAAAAAAAGCGGTAGAGAACCA TATTATAATGATTGGAGATACTGCCGGTCTTATTCATCCGCTTTGCGGTAACGGAATGGCCATGGCAGTTCACAGTGCTA AAATTGCATCAGAATTAATCTTGGAATATTATTCAGATGATAAAGCGTCCCGCAAAGTATTAGAAAAAAAATATACCAAA GAATGGAAGAAACACTTTGGTAAAAGAATATGGATGGGGCGAATTCTGGCGCACATCCTGACCCATAGAACAATTACTAA TGTATTTACTGCCATAACAGCATCATTTCCCAAACTTTTATCAGCGATCATCAAACAAACGCACGGAAAACCTATAACAA TTAATTAA
Upstream 100 bases:
>100_bases CTTTTTCAGAAATAAACTCACCGTTGTTTAAAAAAGTTTCAACTAGAAATAACAGCTCTGTTTTCTTTTCTTTAAATGCT TTTTTTCGTAAATTGCTTGT
Downstream 100 bases:
>100_bases ATGCCGATAAACACGCAATATAGAACGCAGGAATCAGAAATAATGGATGATTTTTTTCTTCAGGGAAAAGATTTACAAGA AGCCCTTGATCAAATTGCTC
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: Oxidoreductase; Electron Transfer Flavoprotein; Geranylgeranyl Reductase
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MKINADVLIIGGGLAGLTAAIHLSQKNLKVILIEKSNFPRHKVCGEYISNEILPYLTWLGADVTELNPSSISKFEFTASN GKTAMVELPLGGFGISRYALDDFLYQKAIANHCLIIKENVIDVSFSDDLFTVTSSNQILTAKIVLGAFGKRSNLDQALDR SFFHKKSPWLAVKAHYSGNLEDDLVALHNFKGGYCGVAKVENNIINICYLADYATFKQYKNIQDYQEGVLYKNKHLKAVF ENSMLLFEKPLTISQISFEKKKAVENHIIMIGDTAGLIHPLCGNGMAMAVHSAKIASELILEYYSDDKASRKVLEKKYTK EWKKHFGKRIWMGRILAHILTHRTITNVFTAITASFPKLLSAIIKQTHGKPITIN
Sequences:
>Translated_375_residues MKINADVLIIGGGLAGLTAAIHLSQKNLKVILIEKSNFPRHKVCGEYISNEILPYLTWLGADVTELNPSSISKFEFTASN GKTAMVELPLGGFGISRYALDDFLYQKAIANHCLIIKENVIDVSFSDDLFTVTSSNQILTAKIVLGAFGKRSNLDQALDR SFFHKKSPWLAVKAHYSGNLEDDLVALHNFKGGYCGVAKVENNIINICYLADYATFKQYKNIQDYQEGVLYKNKHLKAVF ENSMLLFEKPLTISQISFEKKKAVENHIIMIGDTAGLIHPLCGNGMAMAVHSAKIASELILEYYSDDKASRKVLEKKYTK EWKKHFGKRIWMGRILAHILTHRTITNVFTAITASFPKLLSAIIKQTHGKPITIN >Mature_375_residues MKINADVLIIGGGLAGLTAAIHLSQKNLKVILIEKSNFPRHKVCGEYISNEILPYLTWLGADVTELNPSSISKFEFTASN GKTAMVELPLGGFGISRYALDDFLYQKAIANHCLIIKENVIDVSFSDDLFTVTSSNQILTAKIVLGAFGKRSNLDQALDR SFFHKKSPWLAVKAHYSGNLEDDLVALHNFKGGYCGVAKVENNIINICYLADYATFKQYKNIQDYQEGVLYKNKHLKAVF ENSMLLFEKPLTISQISFEKKKAVENHIIMIGDTAGLIHPLCGNGMAMAVHSAKIASELILEYYSDDKASRKVLEKKYTK EWKKHFGKRIWMGRILAHILTHRTITNVFTAITASFPKLLSAIIKQTHGKPITIN
Specific function: Unknown
COG id: COG0644
COG function: function code C; Dehydrogenases (flavoproteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41900; Mature: 41900
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKINADVLIIGGGLAGLTAAIHLSQKNLKVILIEKSNFPRHKVCGEYISNEILPYLTWLG CEECCCEEEECCCHHHHHEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHC ADVTELNPSSISKFEFTASNGKTAMVELPLGGFGISRYALDDFLYQKAIANHCLIIKENV CCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEECCE IDVSFSDDLFTVTSSNQILTAKIVLGAFGKRSNLDQALDRSFFHKKSPWLAVKAHYSGNL EEEEECCCEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCC EDDLVALHNFKGGYCGVAKVENNIINICYLADYATFKQYKNIQDYQEGVLYKNKHLKAVF CHHHHEEECCCCCEEEEEEECCCEEEEEEEHHHHHHHHHCCHHHHHHCCEECCCHHHHHH ENSMLLFEKPLTISQISFEKKKAVENHIIMIGDTAGLIHPLCGNGMAMAVHSAKIASELI HCCEEEEECCCCHHHHCHHHHHHHCCCEEEEECCCCHHHHHCCCCCEEEHHHHHHHHHHH LEYYSDDKASRKVLEKKYTKEWKKHFGKRIWMGRILAHILTHRTITNVFTAITASFPKLL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAIIKQTHGKPITIN HHHHHHHCCCCEEEC >Mature Secondary Structure MKINADVLIIGGGLAGLTAAIHLSQKNLKVILIEKSNFPRHKVCGEYISNEILPYLTWLG CEECCCEEEECCCHHHHHEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHC ADVTELNPSSISKFEFTASNGKTAMVELPLGGFGISRYALDDFLYQKAIANHCLIIKENV CCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEECCE IDVSFSDDLFTVTSSNQILTAKIVLGAFGKRSNLDQALDRSFFHKKSPWLAVKAHYSGNL EEEEECCCEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCC EDDLVALHNFKGGYCGVAKVENNIINICYLADYATFKQYKNIQDYQEGVLYKNKHLKAVF CHHHHEEECCCCCEEEEEEECCCEEEEEEEHHHHHHHHHCCHHHHHHCCEECCCHHHHHH ENSMLLFEKPLTISQISFEKKKAVENHIIMIGDTAGLIHPLCGNGMAMAVHSAKIASELI HCCEEEEECCCCHHHHCHHHHHHHCCCEEEEECCCCHHHHHCCCCCEEEHHHHHHHHHHH LEYYSDDKASRKVLEKKYTKEWKKHFGKRIWMGRILAHILTHRTITNVFTAITASFPKLL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAIIKQTHGKPITIN HHHHHHHCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA