Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301542

Identifier: 146301542

GI number: 146301542

Start: 4510643

End: 4511779

Strand: Reverse

Name: 146301542

Synonym: Fjoh_3803

Alternate gene names: NA

Gene position: 4511779-4510643 (Counterclockwise)

Preceding gene: 146301543

Following gene: 146301541

Centisome position: 74.0

GC content: 34.04

Gene sequence:

>1137_bases
ATGAATAAAACCCAAATCTCAGAATTGCTTAAAAAATATCAAGAAAAAACTTTATCTGATGAAGATCTGGATAAACTTGA
TGCGTGGTATTTGAAAAAAGCGTCAAACAGCAATTTACAGCTTAATGAATACGAGCTGGAAGATAGTTACAAACTTCTAA
AATCGAAATTACCGCTGCAAGAAGAAACTAAAGTAGTTCGTCTTTGGCCTCGAATAGCTGTTGCGGCTTCAATTGCTGTA
CTAATGGGTACAGGAATATTTTATTTTACACAGCCAAAAGAAGAAAAGGTTCAGGTTGCCACAAAACCACAGGAAATTGC
TCCGGGAGGTACTAAAGGTGTATTGACACTTTCGAACGGAAAACAAATTGTACTTTCTGAAATTACGGCAAAAGATACTA
TTGCGCAAGAAGGAGAAGAAAATGAAGTAACAATCAAGATGAACGCAAATGGAGAAGTTACCTATATTATAAATCCAAAT
ACAGACGGAGGTAAAGATGATAATTCATTCAACACTCTTTCAACACCAATAGGAGGACAGTATAATATTATTTTAGCGGA
TGGTACCAAAGTATATCTAAATGCGGTTTCTTCTATTAAATATCCAACACAATTCAACGGAGATAAAAGAGTTGTTGAGT
TAGAAGGTGAAGCTTATTTTGAAGTAGCCAAAAACAAAAACAAACCTTTTATTGTAAAATCCAATAACCAGTCTATTGAA
GTATTGGGAACACATTTTAATGTTCATTCGTATAATAATGAATCGGTTGTTAAAACTACTTTGTTAGAAGGAAGCGTAGC
TGTTACTTATAAAAATCAAAAAGCGATTTTGAAACCTGGACAGCAGTCTGATGTATCTGATAATTTTTCTAAAATTAAAG
TAAAAGAAGTAGATCCGGAAGAAGCGGTTGCCTGGAAAAACGGCCGTTTCAAATTTGACAATGCCGATCTGAAAAATGTA
ATGCGACAGTTGGAACGCTGGTACGGAATAAAAGTAGAATACCGTGGGAATGTCTCTGATGTTCGTTTTAACGGAGGTAC
ATTTAGAAATAAAAATTTGTCTGAAGTATTAAAAGTACTTGAGCTTAGTAATATAAAATTTAAGGTTGAAGGAAAAACAG
TAATTGTAGATCCCTGA

Upstream 100 bases:

>100_bases
TATAGTAATAATTTTTTAATTTTTTTTTGTCATTGTCTATGACAAAATCTCTTTCTAACTGTCTTACTATTAAACAAGAC
AAAAATTTCGTGTAGTAATT

Downstream 100 bases:

>100_bases
TTTTAAGTTTACCTGAATATACTGTGACTATAAACTAAAAAACCAGAAGCAGTTGCGATGCTTCTGGTTGTTATAAAAGT
GTATAGCCAGTATAAGTTGT

Product: FecR anti-FecI sigma factor

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MNKTQISELLKKYQEKTLSDEDLDKLDAWYLKKASNSNLQLNEYELEDSYKLLKSKLPLQEETKVVRLWPRIAVAASIAV
LMGTGIFYFTQPKEEKVQVATKPQEIAPGGTKGVLTLSNGKQIVLSEITAKDTIAQEGEENEVTIKMNANGEVTYIINPN
TDGGKDDNSFNTLSTPIGGQYNIILADGTKVYLNAVSSIKYPTQFNGDKRVVELEGEAYFEVAKNKNKPFIVKSNNQSIE
VLGTHFNVHSYNNESVVKTTLLEGSVAVTYKNQKAILKPGQQSDVSDNFSKIKVKEVDPEEAVAWKNGRFKFDNADLKNV
MRQLERWYGIKVEYRGNVSDVRFNGGTFRNKNLSEVLKVLELSNIKFKVEGKTVIVDP

Sequences:

>Translated_378_residues
MNKTQISELLKKYQEKTLSDEDLDKLDAWYLKKASNSNLQLNEYELEDSYKLLKSKLPLQEETKVVRLWPRIAVAASIAV
LMGTGIFYFTQPKEEKVQVATKPQEIAPGGTKGVLTLSNGKQIVLSEITAKDTIAQEGEENEVTIKMNANGEVTYIINPN
TDGGKDDNSFNTLSTPIGGQYNIILADGTKVYLNAVSSIKYPTQFNGDKRVVELEGEAYFEVAKNKNKPFIVKSNNQSIE
VLGTHFNVHSYNNESVVKTTLLEGSVAVTYKNQKAILKPGQQSDVSDNFSKIKVKEVDPEEAVAWKNGRFKFDNADLKNV
MRQLERWYGIKVEYRGNVSDVRFNGGTFRNKNLSEVLKVLELSNIKFKVEGKTVIVDP
>Mature_378_residues
MNKTQISELLKKYQEKTLSDEDLDKLDAWYLKKASNSNLQLNEYELEDSYKLLKSKLPLQEETKVVRLWPRIAVAASIAV
LMGTGIFYFTQPKEEKVQVATKPQEIAPGGTKGVLTLSNGKQIVLSEITAKDTIAQEGEENEVTIKMNANGEVTYIINPN
TDGGKDDNSFNTLSTPIGGQYNIILADGTKVYLNAVSSIKYPTQFNGDKRVVELEGEAYFEVAKNKNKPFIVKSNNQSIE
VLGTHFNVHSYNNESVVKTTLLEGSVAVTYKNQKAILKPGQQSDVSDNFSKIKVKEVDPEEAVAWKNGRFKFDNADLKNV
MRQLERWYGIKVEYRGNVSDVRFNGGTFRNKNLSEVLKVLELSNIKFKVEGKTVIVDP

Specific function: Unknown

COG id: COG3712

COG function: function code PT; Fe2+-dicitrate sensor, membrane component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42406; Mature: 42406

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTQISELLKKYQEKTLSDEDLDKLDAWYLKKASNSNLQLNEYELEDSYKLLKSKLPLQ
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHCCCCC
EETKVVRLWPRIAVAASIAVLMGTGIFYFTQPKEEKVQVATKPQEIAPGGTKGVLTLSNG
CCCEEEEEHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCHHCCCCCCCEEEEECCC
KQIVLSEITAKDTIAQEGEENEVTIKMNANGEVTYIINPNTDGGKDDNSFNTLSTPIGGQ
CEEEEEECCHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCEECCCCCCE
YNIILADGTKVYLNAVSSIKYPTQFNGDKRVVELEGEAYFEVAKNKNKPFIVKSNNQSIE
EEEEEECCCEEEEEHHHHCCCCCCCCCCEEEEEECCCEEEEEECCCCCCEEEECCCCEEE
VLGTHFNVHSYNNESVVKTTLLEGSVAVTYKNQKAILKPGQQSDVSDNFSKIKVKEVDPE
EEEEEEEEEECCCCCEEEEEEECCEEEEEEECCEEEECCCCCCCCCCCCEEEEEEECCHH
EAVAWKNGRFKFDNADLKNVMRQLERWYGIKVEYRGNVSDVRFNGGTFRNKNLSEVLKVL
HHEEECCCEEEECCCHHHHHHHHHHHHHCEEEEECCCCCEEEECCCCCCCCCHHHHHHHH
ELSNIKFKVEGKTVIVDP
HHCCCEEEECCEEEEECC
>Mature Secondary Structure
MNKTQISELLKKYQEKTLSDEDLDKLDAWYLKKASNSNLQLNEYELEDSYKLLKSKLPLQ
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHCCCCC
EETKVVRLWPRIAVAASIAVLMGTGIFYFTQPKEEKVQVATKPQEIAPGGTKGVLTLSNG
CCCEEEEEHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCHHCCCCCCCEEEEECCC
KQIVLSEITAKDTIAQEGEENEVTIKMNANGEVTYIINPNTDGGKDDNSFNTLSTPIGGQ
CEEEEEECCHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCEECCCCCCE
YNIILADGTKVYLNAVSSIKYPTQFNGDKRVVELEGEAYFEVAKNKNKPFIVKSNNQSIE
EEEEEECCCEEEEEHHHHCCCCCCCCCCEEEEEECCCEEEEEECCCCCCEEEECCCCEEE
VLGTHFNVHSYNNESVVKTTLLEGSVAVTYKNQKAILKPGQQSDVSDNFSKIKVKEVDPE
EEEEEEEEEECCCCCEEEEEEECCEEEEEEECCEEEECCCCCCCCCCCCEEEEEEECCHH
EAVAWKNGRFKFDNADLKNVMRQLERWYGIKVEYRGNVSDVRFNGGTFRNKNLSEVLKVL
HHEEECCCEEEECCCHHHHHHHHHHHHHCEEEEECCCCCEEEECCCCCCCCCHHHHHHHH
ELSNIKFKVEGKTVIVDP
HHCCCEEEECCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA