Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is 146301524
Identifier: 146301524
GI number: 146301524
Start: 4486701
End: 4487372
Strand: Direct
Name: 146301524
Synonym: Fjoh_3785
Alternate gene names: NA
Gene position: 4486701-4487372 (Clockwise)
Preceding gene: 146301523
Following gene: 146301525
Centisome position: 73.59
GC content: 39.88
Gene sequence:
>672_bases ATGCACACTTCAACTATATCCAATAGAAAAGTAAGCTCAAAAAGCAATATAAATGTTTCTCCATTTGAACGCATCCTTAT GACAGCGGCAGGATCTTATCTGTTGTACAAAGGTTTGACCCAGGAAAAGAAAAACATTTCGCAGATTACATCTGGAGGCG CCATGCTTGCCAGAGGTATCAGCGGCTATTGCCCAATTTACAGCGCTGTAGATCATCTTAAAAATGACAAAGGCTCTAAT GTTAATATTAGGACCAATATTACTATCAATAAACCTATTAGTGAGGTTTATGGCTTTTGGCGCAACTTAGAGAATCTTCC AAAATTCATGAACCATCTGGAATCAGTGAAAACAATCAACAGTACACAATCAGAATGGACCGCTAAAGGACCAGCAGGCA TTGGATCACTGAGCTGGAAAGCGGAAATCATTAAAGACCAAAAGGAAAAGATGTTAAGCTGGCAGTCTACCCATGATGCG CCGGTTAAAAACTTTGGAAAAGTACTGTTCAAAGCTCATGGAGACACCACCGAAATAGACATCACCATATCTTATCGTGC CCCTCTGGGAATTGCCGGTCAAGGTGCAGCAAAACTGCTGAACCCTATTTTTGAGAAAATCGTACGCGATGATATTAAAG GATTTAAATCTTACCTTGAAACCAAACAATAA
Upstream 100 bases:
>100_bases TATGAAAAAGAAGGCGGCAACAACAATTCTGGAGGTGCCGGAAGCACAGGAAGCGCCGCAACTAATAGTTAACAGTATAT AATTTTTAAAAATATAAGCT
Downstream 100 bases:
>100_bases ACAGTTATAAACAAGATTTTTTGATTGTTTCTTAAAACCTTTTGAATCAGGATTTCAAAAGGTTTTTACTTCCTGTCTGG TTTTAAATAAAAACATTAAT
Product: cyclase/dehydrase
Products: NA
Alternate protein names: Streptomyces Cyclase/Dehydrase Family; Polyketide Cyclase/Dehydrase; Cyclase
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MHTSTISNRKVSSKSNINVSPFERILMTAAGSYLLYKGLTQEKKNISQITSGGAMLARGISGYCPIYSAVDHLKNDKGSN VNIRTNITINKPISEVYGFWRNLENLPKFMNHLESVKTINSTQSEWTAKGPAGIGSLSWKAEIIKDQKEKMLSWQSTHDA PVKNFGKVLFKAHGDTTEIDITISYRAPLGIAGQGAAKLLNPIFEKIVRDDIKGFKSYLETKQ
Sequences:
>Translated_223_residues MHTSTISNRKVSSKSNINVSPFERILMTAAGSYLLYKGLTQEKKNISQITSGGAMLARGISGYCPIYSAVDHLKNDKGSN VNIRTNITINKPISEVYGFWRNLENLPKFMNHLESVKTINSTQSEWTAKGPAGIGSLSWKAEIIKDQKEKMLSWQSTHDA PVKNFGKVLFKAHGDTTEIDITISYRAPLGIAGQGAAKLLNPIFEKIVRDDIKGFKSYLETKQ >Mature_223_residues MHTSTISNRKVSSKSNINVSPFERILMTAAGSYLLYKGLTQEKKNISQITSGGAMLARGISGYCPIYSAVDHLKNDKGSN VNIRTNITINKPISEVYGFWRNLENLPKFMNHLESVKTINSTQSEWTAKGPAGIGSLSWKAEIIKDQKEKMLSWQSTHDA PVKNFGKVLFKAHGDTTEIDITISYRAPLGIAGQGAAKLLNPIFEKIVRDDIKGFKSYLETKQ
Specific function: Unknown
COG id: COG5637
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24738; Mature: 24738
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: PS00758 ARGE_DAPE_CPG2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTSTISNRKVSSKSNINVSPFERILMTAAGSYLLYKGLTQEKKNISQITSGGAMLARGI CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHCCHHHHHHCC SGYCPIYSAVDHLKNDKGSNVNIRTNITINKPISEVYGFWRNLENLPKFMNHLESVKTIN CCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC STQSEWTAKGPAGIGSLSWKAEIIKDQKEKMLSWQSTHDAPVKNFGKVLFKAHGDTTEID CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEE ITISYRAPLGIAGQGAAKLLNPIFEKIVRDDIKGFKSYLETKQ EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHTSTISNRKVSSKSNINVSPFERILMTAAGSYLLYKGLTQEKKNISQITSGGAMLARGI CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHCCHHHHHHCC SGYCPIYSAVDHLKNDKGSNVNIRTNITINKPISEVYGFWRNLENLPKFMNHLESVKTIN CCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC STQSEWTAKGPAGIGSLSWKAEIIKDQKEKMLSWQSTHDAPVKNFGKVLFKAHGDTTEID CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEE ITISYRAPLGIAGQGAAKLLNPIFEKIVRDDIKGFKSYLETKQ EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA