Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301524

Identifier: 146301524

GI number: 146301524

Start: 4486701

End: 4487372

Strand: Direct

Name: 146301524

Synonym: Fjoh_3785

Alternate gene names: NA

Gene position: 4486701-4487372 (Clockwise)

Preceding gene: 146301523

Following gene: 146301525

Centisome position: 73.59

GC content: 39.88

Gene sequence:

>672_bases
ATGCACACTTCAACTATATCCAATAGAAAAGTAAGCTCAAAAAGCAATATAAATGTTTCTCCATTTGAACGCATCCTTAT
GACAGCGGCAGGATCTTATCTGTTGTACAAAGGTTTGACCCAGGAAAAGAAAAACATTTCGCAGATTACATCTGGAGGCG
CCATGCTTGCCAGAGGTATCAGCGGCTATTGCCCAATTTACAGCGCTGTAGATCATCTTAAAAATGACAAAGGCTCTAAT
GTTAATATTAGGACCAATATTACTATCAATAAACCTATTAGTGAGGTTTATGGCTTTTGGCGCAACTTAGAGAATCTTCC
AAAATTCATGAACCATCTGGAATCAGTGAAAACAATCAACAGTACACAATCAGAATGGACCGCTAAAGGACCAGCAGGCA
TTGGATCACTGAGCTGGAAAGCGGAAATCATTAAAGACCAAAAGGAAAAGATGTTAAGCTGGCAGTCTACCCATGATGCG
CCGGTTAAAAACTTTGGAAAAGTACTGTTCAAAGCTCATGGAGACACCACCGAAATAGACATCACCATATCTTATCGTGC
CCCTCTGGGAATTGCCGGTCAAGGTGCAGCAAAACTGCTGAACCCTATTTTTGAGAAAATCGTACGCGATGATATTAAAG
GATTTAAATCTTACCTTGAAACCAAACAATAA

Upstream 100 bases:

>100_bases
TATGAAAAAGAAGGCGGCAACAACAATTCTGGAGGTGCCGGAAGCACAGGAAGCGCCGCAACTAATAGTTAACAGTATAT
AATTTTTAAAAATATAAGCT

Downstream 100 bases:

>100_bases
ACAGTTATAAACAAGATTTTTTGATTGTTTCTTAAAACCTTTTGAATCAGGATTTCAAAAGGTTTTTACTTCCTGTCTGG
TTTTAAATAAAAACATTAAT

Product: cyclase/dehydrase

Products: NA

Alternate protein names: Streptomyces Cyclase/Dehydrase Family; Polyketide Cyclase/Dehydrase; Cyclase

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MHTSTISNRKVSSKSNINVSPFERILMTAAGSYLLYKGLTQEKKNISQITSGGAMLARGISGYCPIYSAVDHLKNDKGSN
VNIRTNITINKPISEVYGFWRNLENLPKFMNHLESVKTINSTQSEWTAKGPAGIGSLSWKAEIIKDQKEKMLSWQSTHDA
PVKNFGKVLFKAHGDTTEIDITISYRAPLGIAGQGAAKLLNPIFEKIVRDDIKGFKSYLETKQ

Sequences:

>Translated_223_residues
MHTSTISNRKVSSKSNINVSPFERILMTAAGSYLLYKGLTQEKKNISQITSGGAMLARGISGYCPIYSAVDHLKNDKGSN
VNIRTNITINKPISEVYGFWRNLENLPKFMNHLESVKTINSTQSEWTAKGPAGIGSLSWKAEIIKDQKEKMLSWQSTHDA
PVKNFGKVLFKAHGDTTEIDITISYRAPLGIAGQGAAKLLNPIFEKIVRDDIKGFKSYLETKQ
>Mature_223_residues
MHTSTISNRKVSSKSNINVSPFERILMTAAGSYLLYKGLTQEKKNISQITSGGAMLARGISGYCPIYSAVDHLKNDKGSN
VNIRTNITINKPISEVYGFWRNLENLPKFMNHLESVKTINSTQSEWTAKGPAGIGSLSWKAEIIKDQKEKMLSWQSTHDA
PVKNFGKVLFKAHGDTTEIDITISYRAPLGIAGQGAAKLLNPIFEKIVRDDIKGFKSYLETKQ

Specific function: Unknown

COG id: COG5637

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24738; Mature: 24738

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS00758 ARGE_DAPE_CPG2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTSTISNRKVSSKSNINVSPFERILMTAAGSYLLYKGLTQEKKNISQITSGGAMLARGI
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHCCHHHHHHCC
SGYCPIYSAVDHLKNDKGSNVNIRTNITINKPISEVYGFWRNLENLPKFMNHLESVKTIN
CCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
STQSEWTAKGPAGIGSLSWKAEIIKDQKEKMLSWQSTHDAPVKNFGKVLFKAHGDTTEID
CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEE
ITISYRAPLGIAGQGAAKLLNPIFEKIVRDDIKGFKSYLETKQ
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHTSTISNRKVSSKSNINVSPFERILMTAAGSYLLYKGLTQEKKNISQITSGGAMLARGI
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHCCHHHHHHCC
SGYCPIYSAVDHLKNDKGSNVNIRTNITINKPISEVYGFWRNLENLPKFMNHLESVKTIN
CCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
STQSEWTAKGPAGIGSLSWKAEIIKDQKEKMLSWQSTHDAPVKNFGKVLFKAHGDTTEID
CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEE
ITISYRAPLGIAGQGAAKLLNPIFEKIVRDDIKGFKSYLETKQ
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA