| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301440
Identifier: 146301440
GI number: 146301440
Start: 4390253
End: 4390864
Strand: Direct
Name: 146301440
Synonym: Fjoh_3698
Alternate gene names: NA
Gene position: 4390253-4390864 (Clockwise)
Preceding gene: 146301439
Following gene: 146301457
Centisome position: 72.01
GC content: 42.81
Gene sequence:
>612_bases ATGAGAAAAATTGTACTTTTTGCACTTCTAAGCATCCTGTTCGCCAACTGCCAGTCTGATGATTCCGAGCAGGGAAATGC GGATAATTCAAAATCATCCATCGCTTTCACATTGAACAATAAAACGGAATATGTGACCGCTACCGATGTTTCAGGTTCGG CAATTGACGTTACATGGGCGAAAAGCGAGTCTACAAACACTGCTGAGAACGAATACAGCATTTACGGGAGTTTCATCATC AAAAGTCCCGCATCAAATGACAACCGTGATTCGGGCGATATGTATTTTCAAATCGTGACTTCTGATGCAAAGCTGACTGC TGGAAAAACATACGACATTTCTTTCAGCTATCTTAATTCTGGAGTACGTGACATTCCTCTGGCTTATGACCAAGCGGTCT GCTACACAAGCACTGATTTGTTTGAAGGTACTAGAACAGCGGGAAAAATCAAGATAACCAGCTTTGACGGAACAACACTA AAAGCTGAGTTCTCAGTTGATAATCTGACCAACAAGAATCCGTACTCCGATTTTGGGTTCTGCAACGGAAGCAGGATAAC CGAGAAGTCATTCAGCATTTCGAAAGGCACTCTGACTGCTGTAGCTGAATAG
Upstream 100 bases:
>100_bases GATAACGATTTACCTGACAGCTACGCTGACGAACTGTTCCACTACGTTGACAAAGAAATTGATAAATGCCAATAATTTAA TCCAATCTAATTTTAAACAC
Downstream 100 bases:
>100_bases AGAGATTATTACAAGTTTGAAAAAGAGGGATTTATCTCTCTTTTTTTATGCTATCAGGTCAGATTATCACAGCGGAAAGT ATCTGTTTATCAGCTCTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MRKIVLFALLSILFANCQSDDSEQGNADNSKSSIAFTLNNKTEYVTATDVSGSAIDVTWAKSESTNTAENEYSIYGSFII KSPASNDNRDSGDMYFQIVTSDAKLTAGKTYDISFSYLNSGVRDIPLAYDQAVCYTSTDLFEGTRTAGKIKITSFDGTTL KAEFSVDNLTNKNPYSDFGFCNGSRITEKSFSISKGTLTAVAE
Sequences:
>Translated_203_residues MRKIVLFALLSILFANCQSDDSEQGNADNSKSSIAFTLNNKTEYVTATDVSGSAIDVTWAKSESTNTAENEYSIYGSFII KSPASNDNRDSGDMYFQIVTSDAKLTAGKTYDISFSYLNSGVRDIPLAYDQAVCYTSTDLFEGTRTAGKIKITSFDGTTL KAEFSVDNLTNKNPYSDFGFCNGSRITEKSFSISKGTLTAVAE >Mature_203_residues MRKIVLFALLSILFANCQSDDSEQGNADNSKSSIAFTLNNKTEYVTATDVSGSAIDVTWAKSESTNTAENEYSIYGSFII KSPASNDNRDSGDMYFQIVTSDAKLTAGKTYDISFSYLNSGVRDIPLAYDQAVCYTSTDLFEGTRTAGKIKITSFDGTTL KAEFSVDNLTNKNPYSDFGFCNGSRITEKSFSISKGTLTAVAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22064; Mature: 22064
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKIVLFALLSILFANCQSDDSEQGNADNSKSSIAFTLNNKTEYVTATDVSGSAIDVTWA CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCEEEEEEE KSESTNTAENEYSIYGSFIIKSPASNDNRDSGDMYFQIVTSDAKLTAGKTYDISFSYLNS CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCEEECCCEEEEEHHHHCC GVRDIPLAYDQAVCYTSTDLFEGTRTAGKIKITSFDGTTLKAEFSVDNLTNKNPYSDFGF CCCCCCCCCCCEEEEECCHHCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCC CNGSRITEKSFSISKGTLTAVAE CCCCEEECCCCEECCCEEEEECC >Mature Secondary Structure MRKIVLFALLSILFANCQSDDSEQGNADNSKSSIAFTLNNKTEYVTATDVSGSAIDVTWA CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCEEEEEEE KSESTNTAENEYSIYGSFIIKSPASNDNRDSGDMYFQIVTSDAKLTAGKTYDISFSYLNS CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCEEECCCEEEEEHHHHCC GVRDIPLAYDQAVCYTSTDLFEGTRTAGKIKITSFDGTTLKAEFSVDNLTNKNPYSDFGF CCCCCCCCCCCEEEEECCHHCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCC CNGSRITEKSFSISKGTLTAVAE CCCCEEECCCCEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA