Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146301439

Identifier: 146301439

GI number: 146301439

Start: 4389856

End: 4390227

Strand: Direct

Name: 146301439

Synonym: Fjoh_3697

Alternate gene names: NA

Gene position: 4389856-4390227 (Clockwise)

Preceding gene: 146301434

Following gene: 146301440

Centisome position: 72.0

GC content: 42.2

Gene sequence:

>372_bases
ATGAATAATCCATTGAAAATTATCGTTAGAGGTGCAGTTCTTGTTTTTGCGCTTCTCTGCTTTGGAGGCTACATGTACAG
TCTCCGCATCCACAATGAATACAGACAAGAGCATCCGAAAACACAAAGCCTAGATGAACTCAAAGCATGGGCGCAGACAG
CAATCATCCAAAAGTACTGCGAAGACTACGCTTCTGTAAAAGCTATCAACAATGAAACAAACCACCAGAGGGAACTGAGC
CGTCTTGACAACAACAGGTATCTGTATGTTCCGCAGATGGTTCGAAATGTCATTGAGGATAACGATTTACCTGACAGCTA
CGCTGACGAACTGTTCCACTACGTTGACAAAGAAATTGATAAATGCCAATAA

Upstream 100 bases:

>100_bases
AAAAGTCGAATAATGCCGTTTTAAATCATCGGCATATTTGCCGAATTGAATTTTTAATGCTATGTTTGCCCGAATTTTAA
CACATCCTAAAAACTAAAAA

Downstream 100 bases:

>100_bases
TTTAATCCAATCTAATTTTAAACACATGAGAAAAATTGTACTTTTTGCACTTCTAAGCATCCTGTTCGCCAACTGCCAGT
CTGATGATTCCGAGCAGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MNNPLKIIVRGAVLVFALLCFGGYMYSLRIHNEYRQEHPKTQSLDELKAWAQTAIIQKYCEDYASVKAINNETNHQRELS
RLDNNRYLYVPQMVRNVIEDNDLPDSYADELFHYVDKEIDKCQ

Sequences:

>Translated_123_residues
MNNPLKIIVRGAVLVFALLCFGGYMYSLRIHNEYRQEHPKTQSLDELKAWAQTAIIQKYCEDYASVKAINNETNHQRELS
RLDNNRYLYVPQMVRNVIEDNDLPDSYADELFHYVDKEIDKCQ
>Mature_123_residues
MNNPLKIIVRGAVLVFALLCFGGYMYSLRIHNEYRQEHPKTQSLDELKAWAQTAIIQKYCEDYASVKAINNETNHQRELS
RLDNNRYLYVPQMVRNVIEDNDLPDSYADELFHYVDKEIDKCQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14516; Mature: 14516

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNPLKIIVRGAVLVFALLCFGGYMYSLRIHNEYRQEHPKTQSLDELKAWAQTAIIQKYC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
EDYASVKAINNETNHQRELSRLDNNRYLYVPQMVRNVIEDNDLPDSYADELFHYVDKEID
HHHHHHHHHCCCHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
KCQ
CCC
>Mature Secondary Structure
MNNPLKIIVRGAVLVFALLCFGGYMYSLRIHNEYRQEHPKTQSLDELKAWAQTAIIQKYC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
EDYASVKAINNETNHQRELSRLDNNRYLYVPQMVRNVIEDNDLPDSYADELFHYVDKEID
HHHHHHHHHCCCHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
KCQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA