| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301344
Identifier: 146301344
GI number: 146301344
Start: 4298808
End: 4299581
Strand: Direct
Name: 146301344
Synonym: Fjoh_3602
Alternate gene names: NA
Gene position: 4298808-4299581 (Clockwise)
Preceding gene: 146301343
Following gene: 146301345
Centisome position: 70.51
GC content: 36.69
Gene sequence:
>774_bases GTGGCATGGCTGACTGATGAGGATATTATCCGAGAAATCACACTAAAGAAAATTTCTGGTGTAAATGTTCAGATTATTAT CAGTGATGCAAAAGAAAATTATGTCCGGATAGCTAAATTAAAAGAGTATTTAAAATACGCTGGGGTTTTATCAATCGGAA TTACAAAGCCATTCATGCATAATAAGTTTGCAATCATTGATGATCGCTTTATAATCAATGGCTCATACAATTGGTCATAT GGAGCGCGGAGCAGTGAGGAAAATATTTTTATCATCACACTCGATAAATCTGTTGAAGAAGATACAGCGCTGCTGAAAAA GTTTCAGCTTCAATTTCAATATTTGTCACATCGCGTAAGAGCTGTTTCGATTGCAGACTTTGAAGAACTTAATAATTTCA GACAACGAATTGCAAATCCAATTGCTGTTATTTCAGAACTGGACGAAAGCGAAATACTGCTTCGCGAAGAATTTGAAGAA GCTGTTAAGAATTCAATTAACAATTCGCTAAAAGCAAATATACAATTTGACTATACCGGACTGCTGCAAAGAATGCAGAA AGATGGCGGCGGCGTTGAATTCGTAAAACGATTAATCAATGATGAAATTCAGACCGGCGATATGAAATCTGGATTTAGAA AACTTCAGGAACCCATTCCGCATCGCGTAGACCTATCTCTGGAATACTTAGTTTCACAAGAGCGGTTTCAAAGCCTATTT GAACCTAGGCAGGTAGATTTCTGTCTGAACCTAATGAAGCAATATCATCTATAA
Upstream 100 bases:
>100_bases ATAAAAAAAACTCCAGCTGGAATTACAGGTTTATTTTAAAAACATAAAAGCTGAAATAATCAAAACGATCTTAAAAGCTG AAACAGAAATTAAAATAGCG
Downstream 100 bases:
>100_bases TCCTGCCAAGCATTTAAGAGCTGTTACAGTGGATCAGGGCAATTTGCCTAATGGAAGAATGGTTTTAAATCTGGAATGAT TTCTCTGGCACGGGAATAAG
Product: phospholipase D/transphosphatidylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MAWLTDEDIIREITLKKISGVNVQIIISDAKENYVRIAKLKEYLKYAGVLSIGITKPFMHNKFAIIDDRFIINGSYNWSY GARSSEENIFIITLDKSVEEDTALLKKFQLQFQYLSHRVRAVSIADFEELNNFRQRIANPIAVISELDESEILLREEFEE AVKNSINNSLKANIQFDYTGLLQRMQKDGGGVEFVKRLINDEIQTGDMKSGFRKLQEPIPHRVDLSLEYLVSQERFQSLF EPRQVDFCLNLMKQYHL
Sequences:
>Translated_257_residues MAWLTDEDIIREITLKKISGVNVQIIISDAKENYVRIAKLKEYLKYAGVLSIGITKPFMHNKFAIIDDRFIINGSYNWSY GARSSEENIFIITLDKSVEEDTALLKKFQLQFQYLSHRVRAVSIADFEELNNFRQRIANPIAVISELDESEILLREEFEE AVKNSINNSLKANIQFDYTGLLQRMQKDGGGVEFVKRLINDEIQTGDMKSGFRKLQEPIPHRVDLSLEYLVSQERFQSLF EPRQVDFCLNLMKQYHL >Mature_256_residues AWLTDEDIIREITLKKISGVNVQIIISDAKENYVRIAKLKEYLKYAGVLSIGITKPFMHNKFAIIDDRFIINGSYNWSYG ARSSEENIFIITLDKSVEEDTALLKKFQLQFQYLSHRVRAVSIADFEELNNFRQRIANPIAVISELDESEILLREEFEEA VKNSINNSLKANIQFDYTGLLQRMQKDGGGVEFVKRLINDEIQTGDMKSGFRKLQEPIPHRVDLSLEYLVSQERFQSLFE PRQVDFCLNLMKQYHL
Specific function: Unknown
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29924; Mature: 29792
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWLTDEDIIREITLKKISGVNVQIIISDAKENYVRIAKLKEYLKYAGVLSIGITKPFMH CCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHEECCCCCHHC NKFAIIDDRFIINGSYNWSYGARSSEENIFIITLDKSVEEDTALLKKFQLQFQYLSHRVR CCEEEEECEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH AVSIADFEELNNFRQRIANPIAVISELDESEILLREEFEEAVKNSINNSLKANIQFDYTG HEEHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHH LLQRMQKDGGGVEFVKRLINDEIQTGDMKSGFRKLQEPIPHRVDLSLEYLVSQERFQSLF HHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH EPRQVDFCLNLMKQYHL CCHHHHHHHHHHHHHCC >Mature Secondary Structure AWLTDEDIIREITLKKISGVNVQIIISDAKENYVRIAKLKEYLKYAGVLSIGITKPFMH CCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHEECCCCCHHC NKFAIIDDRFIINGSYNWSYGARSSEENIFIITLDKSVEEDTALLKKFQLQFQYLSHRVR CCEEEEECEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH AVSIADFEELNNFRQRIANPIAVISELDESEILLREEFEEAVKNSINNSLKANIQFDYTG HEEHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHH LLQRMQKDGGGVEFVKRLINDEIQTGDMKSGFRKLQEPIPHRVDLSLEYLVSQERFQSLF HHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH EPRQVDFCLNLMKQYHL CCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA