| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301343
Identifier: 146301343
GI number: 146301343
Start: 4298032
End: 4298565
Strand: Direct
Name: 146301343
Synonym: Fjoh_3601
Alternate gene names: NA
Gene position: 4298032-4298565 (Clockwise)
Preceding gene: 146301342
Following gene: 146301344
Centisome position: 70.5
GC content: 34.64
Gene sequence:
>534_bases ATGAGGCATGAATCATTTCAAGTGGATGGCTTCTTAATCACGGTTAGTTATCATGACAGCAAATCCGAATTGCTATTTGA AGCAAAAAGCAAAGGAACTCCTTTAATCGGAACTTATTCTGTTATCAAACATCAACCGCACAGCCAACCAGGAGAATACC ATTTACACGTATATGACGGACAAGACCAGATATTTGCAATTAACAAAAGTGGGAAAGCGCATGATGGATATCATGGAGTT AGAATTCCCAACAAAGTTTATCAAGAGTTAACCAAAAAATATAAAGGCTGGGTTTTCCCTCCTGACCAAATCATTGAATC ATTGAATTACACCTACCTGCTAAATCCGATTATTGATTTAGATTATATGCAAATACTTAATGAGATCACTTTTATAGAGC GGGAAATTAATTTCTTTGAACGTGTTCAATCTATAAATGAAGCCGCTGGCTTAATAAATGCTGTAGAACAAAATGAGTTA TTGCTCAAAAGATTTAAAGATTTGTTTATTGCTTCAGTGAAGAGGTTACAATAA
Upstream 100 bases:
>100_bases AAAAGTTTTGTTAGAAAGTTAGTAACAGAACTTGAAGAATAAAGTACAAAGCTAAAAGCCGTTATAAACAATATTACAAT TAATCTATAAAATAAAACTT
Downstream 100 bases:
>100_bases TGCTGGTCAATATTTGTGTGACGGGATTGAGCTTTTATGCTGAGTTTACTATGGTCATCAATTGGTAAAATTATGCATAA TCAAAAAATTCGAATCTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MRHESFQVDGFLITVSYHDSKSELLFEAKSKGTPLIGTYSVIKHQPHSQPGEYHLHVYDGQDQIFAINKSGKAHDGYHGV RIPNKVYQELTKKYKGWVFPPDQIIESLNYTYLLNPIIDLDYMQILNEITFIEREINFFERVQSINEAAGLINAVEQNEL LLKRFKDLFIASVKRLQ
Sequences:
>Translated_177_residues MRHESFQVDGFLITVSYHDSKSELLFEAKSKGTPLIGTYSVIKHQPHSQPGEYHLHVYDGQDQIFAINKSGKAHDGYHGV RIPNKVYQELTKKYKGWVFPPDQIIESLNYTYLLNPIIDLDYMQILNEITFIEREINFFERVQSINEAAGLINAVEQNEL LLKRFKDLFIASVKRLQ >Mature_177_residues MRHESFQVDGFLITVSYHDSKSELLFEAKSKGTPLIGTYSVIKHQPHSQPGEYHLHVYDGQDQIFAINKSGKAHDGYHGV RIPNKVYQELTKKYKGWVFPPDQIIESLNYTYLLNPIIDLDYMQILNEITFIEREINFFERVQSINEAAGLINAVEQNEL LLKRFKDLFIASVKRLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20573; Mature: 20573
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHESFQVDGFLITVSYHDSKSELLFEAKSKGTPLIGTYSVIKHQPHSQPGEYHLHVYDG CCCCCEEECEEEEEEEECCCCHHHEEECCCCCCCEEEEHHHHHCCCCCCCCCEEEEEECC QDQIFAINKSGKAHDGYHGVRIPNKVYQELTKKYKGWVFPPDQIIESLNYTYLLNPIIDL CCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEECCCCCH DYMQILNEITFIEREINFFERVQSINEAAGLINAVEQNELLLKRFKDLFIASVKRLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRHESFQVDGFLITVSYHDSKSELLFEAKSKGTPLIGTYSVIKHQPHSQPGEYHLHVYDG CCCCCEEECEEEEEEEECCCCHHHEEECCCCCCCEEEEHHHHHCCCCCCCCCEEEEEECC QDQIFAINKSGKAHDGYHGVRIPNKVYQELTKKYKGWVFPPDQIIESLNYTYLLNPIIDL CCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEECCCCCH DYMQILNEITFIEREINFFERVQSINEAAGLINAVEQNELLLKRFKDLFIASVKRLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA