Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301304

Identifier: 146301304

GI number: 146301304

Start: 4253521

End: 4253910

Strand: Direct

Name: 146301304

Synonym: Fjoh_3562

Alternate gene names: NA

Gene position: 4253521-4253910 (Clockwise)

Preceding gene: 146301300

Following gene: 146301305

Centisome position: 69.77

GC content: 37.95

Gene sequence:

>390_bases
ATGAAAGAGAAAAACACCACCCGTACCAAATGGATCCACCTGCGCTTGACGCCAGATGAAATGAAAATTTTAAAAATCGG
ATTTGAAAAATCACTGTGTCCAAAAATGAGCGATTATGCCCGTAAGAATATGCTTGGAAAACCCGTCGTTTTAAAGTACA
GAAATACATCCGTTGATGAATTGGTCATAGAAATCAGCAGACTTAGAACTGAGCTCAATGCCATTGGAAACAATTACAAT
CAGGCAGTAAAAAAACTGCATTCTCTTGGGCAGATTTCAGAATTTAAAAACTGGATTTTATCCTTTCAGCAGGACAGAGA
CAAACTGTTTGAAGCCATTGAAAACATAAAAAATTGTGTGCTGGAACTCGTTGCCAAATGGTCGCTGTAA

Upstream 100 bases:

>100_bases
GGTTGTATCACAACCGAAATCCGGCTGCCTTTTCGCTCGGAACTCGCTGGCAGTGATTTTTAAAGGATTTAAAATGGGAT
AGAAATGAAAATGATGCAAA

Downstream 100 bases:

>100_bases
TTAAAACCGGAACATCGATCCGGCGCATTTTTCATTACAATGAAAACAAAGTTTCCCAGGATAATGCCCTGTGTATAGGA
GCTGAAAACTATCCTGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MKEKNTTRTKWIHLRLTPDEMKILKIGFEKSLCPKMSDYARKNMLGKPVVLKYRNTSVDELVIEISRLRTELNAIGNNYN
QAVKKLHSLGQISEFKNWILSFQQDRDKLFEAIENIKNCVLELVAKWSL

Sequences:

>Translated_129_residues
MKEKNTTRTKWIHLRLTPDEMKILKIGFEKSLCPKMSDYARKNMLGKPVVLKYRNTSVDELVIEISRLRTELNAIGNNYN
QAVKKLHSLGQISEFKNWILSFQQDRDKLFEAIENIKNCVLELVAKWSL
>Mature_129_residues
MKEKNTTRTKWIHLRLTPDEMKILKIGFEKSLCPKMSDYARKNMLGKPVVLKYRNTSVDELVIEISRLRTELNAIGNNYN
QAVKKLHSLGQISEFKNWILSFQQDRDKLFEAIENIKNCVLELVAKWSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15139; Mature: 15139

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKNTTRTKWIHLRLTPDEMKILKIGFEKSLCPKMSDYARKNMLGKPVVLKYRNTSVDE
CCCCCCCCEEEEEEEECCCHHHHHHCCCCHHCCCCHHHHHHHHCCCCCEEEEECCCCHHH
LVIEISRLRTELNAIGNNYNQAVKKLHSLGQISEFKNWILSFQQDRDKLFEAIENIKNCV
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LELVAKWSL
HHHHHHCCC
>Mature Secondary Structure
MKEKNTTRTKWIHLRLTPDEMKILKIGFEKSLCPKMSDYARKNMLGKPVVLKYRNTSVDE
CCCCCCCCEEEEEEEECCCHHHHHHCCCCHHCCCCHHHHHHHHCCCCCEEEEECCCCHHH
LVIEISRLRTELNAIGNNYNQAVKKLHSLGQISEFKNWILSFQQDRDKLFEAIENIKNCV
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LELVAKWSL
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA