Click here to switch to the map view.

The map label for this gene is yuxL [H]

Identifier: 146301300

GI number: 146301300

Start: 4248167

End: 4250779

Strand: Direct

Name: yuxL [H]

Synonym: Fjoh_3558

Alternate gene names: 146301300

Gene position: 4248167-4250779 (Clockwise)

Preceding gene: 146301299

Following gene: 146301304

Centisome position: 69.68

GC content: 37.24

Gene sequence:

>2613_bases
ATGAAGGTTATTAATTATATATCCGCCGTTACTTTTTTCAGGTTTACCTGTTTCATTTTTTGGTTAGTATCCTGTCCCAC
TCTTTTGGGACAGGTTAACCAAAAAAGAATGCTGACGCCAACTGATTACCAACTCTGGAGCAAATTATATGCAGGGAAAA
TTTCAAACAATGGAAAATGGGTCAGCTACCGTCTGCATTACCCCTATACAGATACAGACACACTGGTTTTGCAGAAAGCT
GAGTTTACTAAAAAGTACCTCTTCCCGCATTGCACAACAGGTAAATTTAATGCCGAACTTCAGTTTGCGTGCATCTCGCA
TGATACCTTATATCTCCAGAATCTTAAGACCGGAAAAACGGATATAGTTTCAAGCACAGTTGCTTTTGATTTTTCGGCAA
ACCATAAATTTATTGTTTTGTTTGTGAAAACGTCCGATAAAAAACTAAATCTTGAGATCCGAAATATGGCCGGAAACCAA
ATTTATCAAAAAAAAGAAATATCCAGTTATTGTTTTGATCCTGAACAAAACGGGCTAATCTATACTTCTTTAGAGCATAA
TCTTTACAATACGGAATTAATTCTATTTAAAAATGAAATTGAAAAAAGGATACTAACCACAAATCATAATGTGCCGGTAA
AAAAACTTTTCTGGAAAGCAGGCGGGATTTCTTTTATGAGCCATAATCATGGGCAGTCCTGTTTCTATTACTACAATGTA
GCCAAAGCCAAACTTAATACACTGGATTCAAAAAGTTCGGGTTTTCCTCAGGGAATGCAGATTACGGATTCTCCTATTGG
AAATGCAATGCACTCAGAAAACGGCAGAAATGTAATTATATGGCTTAAAGAACATAATGACTTGCTACAAAAAACAGATC
CCAAAAAAGTTCAGATCTGGAATACAAAAGATAAACTTTTGTTTGATTACAGAAAATATTTAAGTAATCCTAAAACATCT
GATAAAATGGCTGTCTGGAATATGCAGGACAATACCGTTATTCAGATTACAGATAGAAAGTTTTCAAATGGATTTCTAAG
TACGGATTATAATTCCGCCTTCATTTATGATCCGATTGCCTACGAACCGCAAAGCAAACAATTCTGCCCTTTTGATCTGT
ACATTATGGATCTAAAAAACGGCAATCGAAAACCTGTAATAATGAATTATACAATGGATGAAAAACCATCCGGATCGCCT
GACGGGGCTCATCTGTGCTATGCTAAAAATGGACAATGGTGGATCTACAGCATTATGGAGGACACTCATACCTGTCTTAC
AATTGATCTACCTAATTCATTTTTTGCAGAGGATAACAACCGACCATCAGAAAACCCGTCTTACGGCATTGGGGGATGGA
CTACTGACGGTGAAATTATTCTCTATGATAAATATGATCTTTGGAAGATATCATTAGACGGAAAAATAAAAAAGAGATTA
ACTCAAGGGAGGGAAATGCAAAAGACTTTTCGCATTAAGACCTTCAATTCTGATCCTTTACAAAGTGTAACCGAATCTAA
TAAAAATTCGCTGGACCTAAAAAAGAGACTTCTTTTGGAAACCTCCGATAAAGAAACAGCTCAGACAGGTCTGGGTTATT
GGAGCATAAAATCCGGTATGAAGGATATGGTCTGGGAAAGCAAAAAAATAAGCCAGATTAAAAAAGCTGCTGATAAAGAC
ATTTATATGTACGTGACCGAAAACTTTGAATCGCCACCCAAGTTAATGCTATATGATACCAAGCCGAAAGAAATCATGCA
GAGCAACCCCCAGCAGAAATATTTTTACTGGAGCAGAAATGAAAAAATTGAATACATTTCCGATGGTATCAAAACAAAAG
GTATTCTCTTCTACCCTTCGAATTTCAAAGCGGATAAAAAATATCCTATGGTAGTGCACATCTATGAGCGTCAGTTCAGT
TACTTAAATGATTATGTAAATCCTTCACTGATTTCTGACGATGGCTTCAATGTCCATAATTATACGGCTAACGGCTACTT
TGTCTTGTTTCCTGATATTAATTATGAATTTGGAAATCTAAAAAAAACGGTAACCAATAGTGTTCTTGCGGCTGTAGACA
CAGTAATAGCCAAAGGACTTGTAGCTCCTGAAAAGGTAGGTCTCATTGGACATTCTTTCGGAGGCTACGAGGTCGATCTG
ATCATTACACAGACTGACCGTTTTGCTGCTGCTGTATCAGGCGCCGCAATAACGGATCTCATATCGACCTATTTATATGT
AGGTCCAACTTTTAGAAGACCTGATTTTTTCCGGACTGAAAACCACCAGCTCCGCATTGGAAAATCACTTTTCGAAGATA
TGAAGAGCTACCTCGAAAATTCCCCTGTACTGTTAGCTTCAGGTGTCAATACACCTCTGCTTAGTTGGGCAGGAGCCGAG
GACCGTCACGTAAATTCCCAGCAAAGTATGGAATTTTATCTCGCATTAAGACGGCAGAATAAAGAACATATATTACTGTT
TTACCCGGATGAGGAACATGGTTTGGAACAAAAGCAGAATGCAACAGATCTGAACATTCGTATTATGGAGTGGTTTAATT
CCTACCTGAAAGGTGCTAATAAAAAAGAGTGGTTTAGTACTTACTATCAATAA

Upstream 100 bases:

>100_bases
GAGGTATTATCCCCAGTTAAAGCGCAATGGAATACTTCTGACCGATTGTTCCCTTTACCTGAATCTGAACTATTGTTGAA
TCCAAATCTACTTCCGCAAA

Downstream 100 bases:

>100_bases
AATTATCTACTACATATAATAAACAAAGATGCCTCCGCCGTTTGTAAACAGCTGAGGCATCCTTTTTTCTAAAACAGCAC
CTTACGGATTACTTCTCTTT

Product: peptidase S9 prolyl oligopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 870; Mature: 870

Protein sequence:

>870_residues
MKVINYISAVTFFRFTCFIFWLVSCPTLLGQVNQKRMLTPTDYQLWSKLYAGKISNNGKWVSYRLHYPYTDTDTLVLQKA
EFTKKYLFPHCTTGKFNAELQFACISHDTLYLQNLKTGKTDIVSSTVAFDFSANHKFIVLFVKTSDKKLNLEIRNMAGNQ
IYQKKEISSYCFDPEQNGLIYTSLEHNLYNTELILFKNEIEKRILTTNHNVPVKKLFWKAGGISFMSHNHGQSCFYYYNV
AKAKLNTLDSKSSGFPQGMQITDSPIGNAMHSENGRNVIIWLKEHNDLLQKTDPKKVQIWNTKDKLLFDYRKYLSNPKTS
DKMAVWNMQDNTVIQITDRKFSNGFLSTDYNSAFIYDPIAYEPQSKQFCPFDLYIMDLKNGNRKPVIMNYTMDEKPSGSP
DGAHLCYAKNGQWWIYSIMEDTHTCLTIDLPNSFFAEDNNRPSENPSYGIGGWTTDGEIILYDKYDLWKISLDGKIKKRL
TQGREMQKTFRIKTFNSDPLQSVTESNKNSLDLKKRLLLETSDKETAQTGLGYWSIKSGMKDMVWESKKISQIKKAADKD
IYMYVTENFESPPKLMLYDTKPKEIMQSNPQQKYFYWSRNEKIEYISDGIKTKGILFYPSNFKADKKYPMVVHIYERQFS
YLNDYVNPSLISDDGFNVHNYTANGYFVLFPDINYEFGNLKKTVTNSVLAAVDTVIAKGLVAPEKVGLIGHSFGGYEVDL
IITQTDRFAAAVSGAAITDLISTYLYVGPTFRRPDFFRTENHQLRIGKSLFEDMKSYLENSPVLLASGVNTPLLSWAGAE
DRHVNSQQSMEFYLALRRQNKEHILLFYPDEEHGLEQKQNATDLNIRIMEWFNSYLKGANKKEWFSTYYQ

Sequences:

>Translated_870_residues
MKVINYISAVTFFRFTCFIFWLVSCPTLLGQVNQKRMLTPTDYQLWSKLYAGKISNNGKWVSYRLHYPYTDTDTLVLQKA
EFTKKYLFPHCTTGKFNAELQFACISHDTLYLQNLKTGKTDIVSSTVAFDFSANHKFIVLFVKTSDKKLNLEIRNMAGNQ
IYQKKEISSYCFDPEQNGLIYTSLEHNLYNTELILFKNEIEKRILTTNHNVPVKKLFWKAGGISFMSHNHGQSCFYYYNV
AKAKLNTLDSKSSGFPQGMQITDSPIGNAMHSENGRNVIIWLKEHNDLLQKTDPKKVQIWNTKDKLLFDYRKYLSNPKTS
DKMAVWNMQDNTVIQITDRKFSNGFLSTDYNSAFIYDPIAYEPQSKQFCPFDLYIMDLKNGNRKPVIMNYTMDEKPSGSP
DGAHLCYAKNGQWWIYSIMEDTHTCLTIDLPNSFFAEDNNRPSENPSYGIGGWTTDGEIILYDKYDLWKISLDGKIKKRL
TQGREMQKTFRIKTFNSDPLQSVTESNKNSLDLKKRLLLETSDKETAQTGLGYWSIKSGMKDMVWESKKISQIKKAADKD
IYMYVTENFESPPKLMLYDTKPKEIMQSNPQQKYFYWSRNEKIEYISDGIKTKGILFYPSNFKADKKYPMVVHIYERQFS
YLNDYVNPSLISDDGFNVHNYTANGYFVLFPDINYEFGNLKKTVTNSVLAAVDTVIAKGLVAPEKVGLIGHSFGGYEVDL
IITQTDRFAAAVSGAAITDLISTYLYVGPTFRRPDFFRTENHQLRIGKSLFEDMKSYLENSPVLLASGVNTPLLSWAGAE
DRHVNSQQSMEFYLALRRQNKEHILLFYPDEEHGLEQKQNATDLNIRIMEWFNSYLKGANKKEWFSTYYQ
>Mature_870_residues
MKVINYISAVTFFRFTCFIFWLVSCPTLLGQVNQKRMLTPTDYQLWSKLYAGKISNNGKWVSYRLHYPYTDTDTLVLQKA
EFTKKYLFPHCTTGKFNAELQFACISHDTLYLQNLKTGKTDIVSSTVAFDFSANHKFIVLFVKTSDKKLNLEIRNMAGNQ
IYQKKEISSYCFDPEQNGLIYTSLEHNLYNTELILFKNEIEKRILTTNHNVPVKKLFWKAGGISFMSHNHGQSCFYYYNV
AKAKLNTLDSKSSGFPQGMQITDSPIGNAMHSENGRNVIIWLKEHNDLLQKTDPKKVQIWNTKDKLLFDYRKYLSNPKTS
DKMAVWNMQDNTVIQITDRKFSNGFLSTDYNSAFIYDPIAYEPQSKQFCPFDLYIMDLKNGNRKPVIMNYTMDEKPSGSP
DGAHLCYAKNGQWWIYSIMEDTHTCLTIDLPNSFFAEDNNRPSENPSYGIGGWTTDGEIILYDKYDLWKISLDGKIKKRL
TQGREMQKTFRIKTFNSDPLQSVTESNKNSLDLKKRLLLETSDKETAQTGLGYWSIKSGMKDMVWESKKISQIKKAADKD
IYMYVTENFESPPKLMLYDTKPKEIMQSNPQQKYFYWSRNEKIEYISDGIKTKGILFYPSNFKADKKYPMVVHIYERQFS
YLNDYVNPSLISDDGFNVHNYTANGYFVLFPDINYEFGNLKKTVTNSVLAAVDTVIAKGLVAPEKVGLIGHSFGGYEVDL
IITQTDRFAAAVSGAAITDLISTYLYVGPTFRRPDFFRTENHQLRIGKSLFEDMKSYLENSPVLLASGVNTPLLSWAGAE
DRHVNSQQSMEFYLALRRQNKEHILLFYPDEEHGLEQKQNATDLNIRIMEWFNSYLKGANKKEWFSTYYQ

Specific function: Unknown

COG id: COG1506

COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S9B family [H]

Homologues:

Organism=Caenorhabditis elegans, GI25144537, Length=178, Percent_Identity=29.2134831460674, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI25144540, Length=178, Percent_Identity=29.2134831460674, Blast_Score=75, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR011659
- InterPro:   IPR001375 [H]

Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 100726; Mature: 100726

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVINYISAVTFFRFTCFIFWLVSCPTLLGQVNQKRMLTPTDYQLWSKLYAGKISNNGKW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCEECCCCCE
VSYRLHYPYTDTDTLVLQKAEFTKKYLFPHCTTGKFNAELQFACISHDTLYLQNLKTGKT
EEEEEECCCCCCCEEEEEEHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCH
DIVSSTVAFDFSANHKFIVLFVKTSDKKLNLEIRNMAGNQIYQKKEISSYCFDPEQNGLI
HHEEEEEEEEECCCCEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEE
YTSLEHNLYNTELILFKNEIEKRILTTNHNVPVKKLFWKAGGISFMSHNHGQSCFYYYNV
EEEECCCCCCCEEEEEECCHHHHEEECCCCCCHHHHHHHCCCEEEEECCCCCEEEEEEEE
AKAKLNTLDSKSSGFPQGMQITDSPIGNAMHSENGRNVIIWLKEHNDLLQKTDPKKVQIW
EEHHHHCCCCCCCCCCCCCEEECCCCCCCHHCCCCCEEEEEEECCCCHHHCCCCCEEEEE
NTKDKLLFDYRKYLSNPKTSDKMAVWNMQDNTVIQITDRKFSNGFLSTDYNSAFIYDPIA
CCCHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEECCCCCEEEECCCC
YEPQSKQFCPFDLYIMDLKNGNRKPVIMNYTMDEKPSGSPDGAHLCYAKNGQWWIYSIME
CCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCEEEEEEEC
DTHTCLTIDLPNSFFAEDNNRPSENPSYGIGGWTTDGEIILYDKYDLWKISLDGKIKKRL
CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEECCHHHHHH
TQGREMQKTFRIKTFNSDPLQSVTESNKNSLDLKKRLLLETSDKETAQTGLGYWSIKSGM
HCCHHHHHEEEEEECCCCHHHHHHHCCCCCHHHHHHHEEECCCCHHHHHCCCEEEHHCCC
KDMVWESKKISQIKKAADKDIYMYVTENFESPPKLMLYDTKPKEIMQSNPQQKYFYWSRN
HHHHHCHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCHHHHHCCCCCEEEEEECC
EKIEYISDGIKTKGILFYPSNFKADKKYPMVVHIYERQFSYLNDYVNPSLISDDGFNVHN
CCCHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCEECCCCCEEEE
YTANGYFVLFPDINYEFGNLKKTVTNSVLAAVDTVIAKGLVAPEKVGLIGHSFGGYEVDL
EECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCEEECCCCCEEEEE
IITQTDRFAAAVSGAAITDLISTYLYVGPTFRRPDFFRTENHQLRIGKSLFEDMKSYLEN
EEEECCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEECHHHHHHHHHHHCC
SPVLLASGVNTPLLSWAGAEDRHVNSQQSMEFYLALRRQNKEHILLFYPDEEHGLEQKQN
CCEEEECCCCCCEEEECCCCCCCCCCHHHHHEEEHHHCCCCCEEEEEECCCCCCCHHHCC
ATDLNIRIMEWFNSYLKGANKKEWFSTYYQ
CCCEEEEHHHHHHHHHCCCCCHHHHHHHCC
>Mature Secondary Structure
MKVINYISAVTFFRFTCFIFWLVSCPTLLGQVNQKRMLTPTDYQLWSKLYAGKISNNGKW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCEECCCCCE
VSYRLHYPYTDTDTLVLQKAEFTKKYLFPHCTTGKFNAELQFACISHDTLYLQNLKTGKT
EEEEEECCCCCCCEEEEEEHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCH
DIVSSTVAFDFSANHKFIVLFVKTSDKKLNLEIRNMAGNQIYQKKEISSYCFDPEQNGLI
HHEEEEEEEEECCCCEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEE
YTSLEHNLYNTELILFKNEIEKRILTTNHNVPVKKLFWKAGGISFMSHNHGQSCFYYYNV
EEEECCCCCCCEEEEEECCHHHHEEECCCCCCHHHHHHHCCCEEEEECCCCCEEEEEEEE
AKAKLNTLDSKSSGFPQGMQITDSPIGNAMHSENGRNVIIWLKEHNDLLQKTDPKKVQIW
EEHHHHCCCCCCCCCCCCCEEECCCCCCCHHCCCCCEEEEEEECCCCHHHCCCCCEEEEE
NTKDKLLFDYRKYLSNPKTSDKMAVWNMQDNTVIQITDRKFSNGFLSTDYNSAFIYDPIA
CCCHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEECCCCCEEEECCCC
YEPQSKQFCPFDLYIMDLKNGNRKPVIMNYTMDEKPSGSPDGAHLCYAKNGQWWIYSIME
CCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCEEEEEEEC
DTHTCLTIDLPNSFFAEDNNRPSENPSYGIGGWTTDGEIILYDKYDLWKISLDGKIKKRL
CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEECCHHHHHH
TQGREMQKTFRIKTFNSDPLQSVTESNKNSLDLKKRLLLETSDKETAQTGLGYWSIKSGM
HCCHHHHHEEEEEECCCCHHHHHHHCCCCCHHHHHHHEEECCCCHHHHHCCCEEEHHCCC
KDMVWESKKISQIKKAADKDIYMYVTENFESPPKLMLYDTKPKEIMQSNPQQKYFYWSRN
HHHHHCHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCHHHHHCCCCCEEEEEECC
EKIEYISDGIKTKGILFYPSNFKADKKYPMVVHIYERQFSYLNDYVNPSLISDDGFNVHN
CCCHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCEECCCCCEEEE
YTANGYFVLFPDINYEFGNLKKTVTNSVLAAVDTVIAKGLVAPEKVGLIGHSFGGYEVDL
EECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCEEECCCCCEEEEE
IITQTDRFAAAVSGAAITDLISTYLYVGPTFRRPDFFRTENHQLRIGKSLFEDMKSYLEN
EEEECCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEECHHHHHHHHHHHCC
SPVLLASGVNTPLLSWAGAEDRHVNSQQSMEFYLALRRQNKEHILLFYPDEEHGLEQKQN
CCEEEECCCCCCEEEECCCCCCCCCCHHHHHEEEHHHCCCCCEEEEEECCCCCCCHHHCC
ATDLNIRIMEWFNSYLKGANKKEWFSTYYQ
CCCEEEEHHHHHHHHHCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 3098560 [H]