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The map label for this gene is alcA [H]

Identifier: 146300918

GI number: 146300918

Start: 3777885

End: 3779207

Strand: Direct

Name: alcA [H]

Synonym: Fjoh_3173

Alternate gene names: 146300918

Gene position: 3777885-3779207 (Clockwise)

Preceding gene: 146300917

Following gene: 146300919

Centisome position: 61.96

GC content: 35.15

Gene sequence:

>1323_bases
ATGGAAGATCGTAAAGTATATTCATTAATAGGCATTGGCATTGGACCTTTTAATTTGGGCTTAGCCGCTTTATTAGAACC
GGTTGATGACGTTTCATCACTTTTTTTTGACCAAAGAGAACAGTTTAACTGGCATCCGGGTCTGCTATTTGACCATGTAA
CACTTCAAACTCCATTTTTATGTGACTGTGTTTCTATGGCAGATCCTACAAGTAAATTCAGTTTTTTAAATTTCCTTAAA
AAGACAGACCGTTTGTATAAATTTTTTATCCGTGAAAACTTTTTCGTCCTACGCAAAGAGTACAATTTATACTGCCAATG
GGTAATTAAACAGTTGCAAAACTGCCGTTTTTCATCGAGCGTAAGAGAAATTTATTATAAAGACGGCCTTTATGAGCTGC
ATGTTTTTCATAAAGATCAGGATCAGACCAAAATATACTATACAGAAAAATTAGTATTAGGAACTGGAACTGTGCCTATA
CTTCCTGATTTTGTCGATTTAAATGAAATGGAAAAAGTCTGTCATACGTCAAGCTATCTTTTTAGAAAAGAAGAAATATT
AGAGCAGGATACCGTTACTGTTATTGGTTCCGGACAAAGTGCTGCCGAAGTTTTCTTTGATCTGCTTCAAAACAGACCTA
AAAACTTAAAACTAAATTGGTATTCCCGTCCTGATCGCTTTTTTGCTATGGAATATTCCAAGCTTATTTTAGAACATACA
TCGCCGGATTATATCGACTATTTTCATCAAATGTCGGCTTCAGATCGCAAAGTCATGCTGGATCGTCAGAAATCACAATT
TAAAGGAGTCAACTTTGATTTGCTGAATGAGATTTATGATTATATGTATGCGCTTAGTGTAGACAACGATGATATTGGTG
TAAAGATCAGACCTAATATTCAATTGGATGATATAACGGCTGGAATTCACAATAACTACGAACTGCATCTGGAACAGGTT
GAACAGCACAAAAAGTTTACAGACCAAGCTGACTATGTAATTTTAGGTACAGGATATCATTATCAGGAACCTCAATTTCT
TAAAGATATTCAGCATAGAATCAGCAGAACTTCTACAGGCAGTTACGATGTAAAAAGAAACTACTCCATAGATACTAACG
GCAGTGAAATTTTTGTACAAAACGCAGAAATCCATACGCACAGCTACATTTCATCAGATTTAGGAATGGGCGCTTACCGC
AATTCCTATATCATTAATGAAGTGGCAAAACGTGAAGTATATAAATTAGAAAAGAGAATTGCTTTTCAGGATTTTGATCT
TTCGGGCATTGCTGCAGAAAAGACAGTTGAAATTAGTATTTAA

Upstream 100 bases:

>100_bases
CTTAATTTCTGCTATCGAGAATGGTATTGGGAAAAATTCCCGCAGAATAAAGACATTATCATAAACTCAGAAGCAGAACA
TAATCTTATAAACCAATAAT

Downstream 100 bases:

>100_bases
TAATCATTTAAAATGAATATAGAAACAATACCACACTTAGAAGTTTTTACCGCTCAGGTTTGGGAAAAGGTAAATCTTAA
TCTGCTGGCTAAGAGTTTAG

Product: L-lysine 6-monooxygenase (NADPH)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MEDRKVYSLIGIGIGPFNLGLAALLEPVDDVSSLFFDQREQFNWHPGLLFDHVTLQTPFLCDCVSMADPTSKFSFLNFLK
KTDRLYKFFIRENFFVLRKEYNLYCQWVIKQLQNCRFSSSVREIYYKDGLYELHVFHKDQDQTKIYYTEKLVLGTGTVPI
LPDFVDLNEMEKVCHTSSYLFRKEEILEQDTVTVIGSGQSAAEVFFDLLQNRPKNLKLNWYSRPDRFFAMEYSKLILEHT
SPDYIDYFHQMSASDRKVMLDRQKSQFKGVNFDLLNEIYDYMYALSVDNDDIGVKIRPNIQLDDITAGIHNNYELHLEQV
EQHKKFTDQADYVILGTGYHYQEPQFLKDIQHRISRTSTGSYDVKRNYSIDTNGSEIFVQNAEIHTHSYISSDLGMGAYR
NSYIINEVAKREVYKLEKRIAFQDFDLSGIAAEKTVEISI

Sequences:

>Translated_440_residues
MEDRKVYSLIGIGIGPFNLGLAALLEPVDDVSSLFFDQREQFNWHPGLLFDHVTLQTPFLCDCVSMADPTSKFSFLNFLK
KTDRLYKFFIRENFFVLRKEYNLYCQWVIKQLQNCRFSSSVREIYYKDGLYELHVFHKDQDQTKIYYTEKLVLGTGTVPI
LPDFVDLNEMEKVCHTSSYLFRKEEILEQDTVTVIGSGQSAAEVFFDLLQNRPKNLKLNWYSRPDRFFAMEYSKLILEHT
SPDYIDYFHQMSASDRKVMLDRQKSQFKGVNFDLLNEIYDYMYALSVDNDDIGVKIRPNIQLDDITAGIHNNYELHLEQV
EQHKKFTDQADYVILGTGYHYQEPQFLKDIQHRISRTSTGSYDVKRNYSIDTNGSEIFVQNAEIHTHSYISSDLGMGAYR
NSYIINEVAKREVYKLEKRIAFQDFDLSGIAAEKTVEISI
>Mature_440_residues
MEDRKVYSLIGIGIGPFNLGLAALLEPVDDVSSLFFDQREQFNWHPGLLFDHVTLQTPFLCDCVSMADPTSKFSFLNFLK
KTDRLYKFFIRENFFVLRKEYNLYCQWVIKQLQNCRFSSSVREIYYKDGLYELHVFHKDQDQTKIYYTEKLVLGTGTVPI
LPDFVDLNEMEKVCHTSSYLFRKEEILEQDTVTVIGSGQSAAEVFFDLLQNRPKNLKLNWYSRPDRFFAMEYSKLILEHT
SPDYIDYFHQMSASDRKVMLDRQKSQFKGVNFDLLNEIYDYMYALSVDNDDIGVKIRPNIQLDDITAGIHNNYELHLEQV
EQHKKFTDQADYVILGTGYHYQEPQFLKDIQHRISRTSTGSYDVKRNYSIDTNGSEIFVQNAEIHTHSYISSDLGMGAYR
NSYIINEVAKREVYKLEKRIAFQDFDLSGIAAEKTVEISI

Specific function: Unknown

COG id: COG3486

COG function: function code Q; Lysine/ornithine N-monooxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51538; Mature: 51538

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDRKVYSLIGIGIGPFNLGLAALLEPVDDVSSLFFDQREQFNWHPGLLFDHVTLQTPFL
CCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEECEEECCCHH
CDCVSMADPTSKFSFLNFLKKTDRLYKFFIRENFFVLRKEYNLYCQWVIKQLQNCRFSSS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCHHHH
VREIYYKDGLYELHVFHKDQDQTKIYYTEKLVLGTGTVPILPDFVDLNEMEKVCHTSSYL
HHHHHHCCCEEEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
FRKEEILEQDTVTVIGSGQSAAEVFFDLLQNRPKNLKLNWYSRPDRFFAMEYSKLILEHT
HHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEHHHHHHHHHHCC
SPDYIDYFHQMSASDRKVMLDRQKSQFKGVNFDLLNEIYDYMYALSVDNDDIGVKIRPNI
CCHHHHHHHHCCCCCCHHHHCCCHHHHCCCCHHHHHHHHHHHEEEEECCCCCCEEEECCE
QLDDITAGIHNNYELHLEQVEQHKKFTDQADYVILGTGYHYQEPQFLKDIQHRISRTSTG
EEEEEECCCCCCCEEHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCC
SYDVKRNYSIDTNGSEIFVQNAEIHTHSYISSDLGMGAYRNSYIINEVAKREVYKLEKRI
CEEEEECCEECCCCCEEEEECCEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
AFQDFDLSGIAAEKTVEISI
HHCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MEDRKVYSLIGIGIGPFNLGLAALLEPVDDVSSLFFDQREQFNWHPGLLFDHVTLQTPFL
CCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEECEEECCCHH
CDCVSMADPTSKFSFLNFLKKTDRLYKFFIRENFFVLRKEYNLYCQWVIKQLQNCRFSSS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCHHHH
VREIYYKDGLYELHVFHKDQDQTKIYYTEKLVLGTGTVPILPDFVDLNEMEKVCHTSSYL
HHHHHHCCCEEEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
FRKEEILEQDTVTVIGSGQSAAEVFFDLLQNRPKNLKLNWYSRPDRFFAMEYSKLILEHT
HHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEHHHHHHHHHHCC
SPDYIDYFHQMSASDRKVMLDRQKSQFKGVNFDLLNEIYDYMYALSVDNDDIGVKIRPNI
CCHHHHHHHHCCCCCCHHHHCCCHHHHCCCCHHHHHHHHHHHEEEEECCCCCCEEEECCE
QLDDITAGIHNNYELHLEQVEQHKKFTDQADYVILGTGYHYQEPQFLKDIQHRISRTSTG
EEEEEECCCCCCCEEHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCC
SYDVKRNYSIDTNGSEIFVQNAEIHTHSYISSDLGMGAYRNSYIINEVAKREVYKLEKRI
CEEEEECCEECCCCCEEEEECCEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
AFQDFDLSGIAAEKTVEISI
HHCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8566764; 12910271 [H]