Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146300914

Identifier: 146300914

GI number: 146300914

Start: 3771887

End: 3772999

Strand: Reverse

Name: 146300914

Synonym: Fjoh_3169

Alternate gene names: NA

Gene position: 3772999-3771887 (Counterclockwise)

Preceding gene: 146300926

Following gene: 146300892

Centisome position: 61.88

GC content: 37.29

Gene sequence:

>1113_bases
ATGAAATCACAATCATTAATTGAAGATGAGATACCAGTAAAAGAAAACTATGCTTATCAAATTCCTACAAGCCCGCTGAT
AGTGGAGGTTACGCCTCAGGAAAGAAACATTTTGTCTAATGTGGGCGCTCTGCTGGAAAAGGCATTTAAGAGCTATGAAA
ACCCAGATTATATAGAAGCGCTTCATCTGTATTCTTTTCAGCTTCTTCCAGAAAGAATAGCCAGAATTTTAAGCCGTTTT
GGAACAGATTTCTCAGCTGATCAGTATGGCGCTATTATTTTTAGAGGTCTTCTTGAAGTTGATCAGGATCATCTGGGACC
AACTCCTGCGAATTGGCAGAGCGCTGATTACTCAAAACTCAATAAATACGGCTTTATTTGTTCCTTGCTGCATGGTGCAG
TTCCTTCAAAACCAGTACAATATTATGCGCAGAGAAAGGGCGGGGGAATTCTTCATGCTGTTATTCCAGATGAGAAAATG
GCAGCTACGCAAACAGGTTCGGGATCAAAAACAAATTTGTATGTTCATACAGAAGATGCTTTTCTTTTACATCAGGCTGA
TTTTTTAAGTTTTCTATATCTGCGAAATGAAGAAAGAGTTCCTTCTACACTTTACTCAGTAAGGTCGCATGGTAAGGTGA
ATAAGATAATGGAAAAGCTTTTTGATCCAATTTATCAATGTCCTAAAGATGCTAATTATCAGGAAGAAATTAATGATGGT
CCGCTGGCTTCTGTTTTATATGGAAATAAAAAGCTGCCTTTTATTAGATTTGATGCAGCAGAGCAGATATTTAATGAAAA
CGCCGGACAGACTCCCGAAGCTCTTTACAATTTAACTGAATTTTGGAATGAAGCTAAAGAGTTGATTAATAGTGATTATA
TCCCAGATTCTGGTGATGTTATATTTGTAAATAATCATTTGTGTGCTCACGGAAGAAGTGCTTTTACAGCAGGGCAGAAA
GAGGAGAATGGTAAGCTTGTGCCATGTGAGAGACGACAAATGTTAAGAATGATGAGCAAAACCAGTCTAATTCATATAAG
ATCAATGACACATACCGATGATCCGTATTTTGTTATGGAAGAACATTTAGGAAAAGTTTTTGATCAGGCTTAA

Upstream 100 bases:

>100_bases
ATGTTATGGAATGATGTTTTATTTATATATAGCTTGATTTTTAACGGTTTGTGTTTATTATTTGTCCCAATTTTTGTTAA
CTATTAAATAAACTAAAAAA

Downstream 100 bases:

>100_bases
CGGCTGTAATCAATTAATAAAAAAGAGATATCAAATTATATTTGATATCTCTTTTTATATCAGTAAAAATGGATTTAAAG
TGTTTGTATTCAGTATTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Clavaminate Synthase; L-Arginine Beta-Hydroxylase

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MKSQSLIEDEIPVKENYAYQIPTSPLIVEVTPQERNILSNVGALLEKAFKSYENPDYIEALHLYSFQLLPERIARILSRF
GTDFSADQYGAIIFRGLLEVDQDHLGPTPANWQSADYSKLNKYGFICSLLHGAVPSKPVQYYAQRKGGGILHAVIPDEKM
AATQTGSGSKTNLYVHTEDAFLLHQADFLSFLYLRNEERVPSTLYSVRSHGKVNKIMEKLFDPIYQCPKDANYQEEINDG
PLASVLYGNKKLPFIRFDAAEQIFNENAGQTPEALYNLTEFWNEAKELINSDYIPDSGDVIFVNNHLCAHGRSAFTAGQK
EENGKLVPCERRQMLRMMSKTSLIHIRSMTHTDDPYFVMEEHLGKVFDQA

Sequences:

>Translated_370_residues
MKSQSLIEDEIPVKENYAYQIPTSPLIVEVTPQERNILSNVGALLEKAFKSYENPDYIEALHLYSFQLLPERIARILSRF
GTDFSADQYGAIIFRGLLEVDQDHLGPTPANWQSADYSKLNKYGFICSLLHGAVPSKPVQYYAQRKGGGILHAVIPDEKM
AATQTGSGSKTNLYVHTEDAFLLHQADFLSFLYLRNEERVPSTLYSVRSHGKVNKIMEKLFDPIYQCPKDANYQEEINDG
PLASVLYGNKKLPFIRFDAAEQIFNENAGQTPEALYNLTEFWNEAKELINSDYIPDSGDVIFVNNHLCAHGRSAFTAGQK
EENGKLVPCERRQMLRMMSKTSLIHIRSMTHTDDPYFVMEEHLGKVFDQA
>Mature_370_residues
MKSQSLIEDEIPVKENYAYQIPTSPLIVEVTPQERNILSNVGALLEKAFKSYENPDYIEALHLYSFQLLPERIARILSRF
GTDFSADQYGAIIFRGLLEVDQDHLGPTPANWQSADYSKLNKYGFICSLLHGAVPSKPVQYYAQRKGGGILHAVIPDEKM
AATQTGSGSKTNLYVHTEDAFLLHQADFLSFLYLRNEERVPSTLYSVRSHGKVNKIMEKLFDPIYQCPKDANYQEEINDG
PLASVLYGNKKLPFIRFDAAEQIFNENAGQTPEALYNLTEFWNEAKELINSDYIPDSGDVIFVNNHLCAHGRSAFTAGQK
EENGKLVPCERRQMLRMMSKTSLIHIRSMTHTDDPYFVMEEHLGKVFDQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42002; Mature: 42002

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSQSLIEDEIPVKENYAYQIPTSPLIVEVTPQERNILSNVGALLEKAFKSYENPDYIEA
CCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
LHLYSFQLLPERIARILSRFGTDFSADQYGAIIFRGLLEVDQDHLGPTPANWQSADYSKL
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
NKYGFICSLLHGAVPSKPVQYYAQRKGGGILHAVIPDEKMAATQTGSGSKTNLYVHTEDA
HHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEECCCCHHHHCCCCCCCCEEEEEEECCE
FLLHQADFLSFLYLRNEERVPSTLYSVRSHGKVNKIMEKLFDPIYQCPKDANYQEEINDG
EEHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCC
PLASVLYGNKKLPFIRFDAAEQIFNENAGQTPEALYNLTEFWNEAKELINSDYIPDSGDV
CEEHEEECCCCCCEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
IFVNNHLCAHGRSAFTAGQKEENGKLVPCERRQMLRMMSKTSLIHIRSMTHTDDPYFVME
EEECCCHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHH
EHLGKVFDQA
HHHHHHHCCC
>Mature Secondary Structure
MKSQSLIEDEIPVKENYAYQIPTSPLIVEVTPQERNILSNVGALLEKAFKSYENPDYIEA
CCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
LHLYSFQLLPERIARILSRFGTDFSADQYGAIIFRGLLEVDQDHLGPTPANWQSADYSKL
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
NKYGFICSLLHGAVPSKPVQYYAQRKGGGILHAVIPDEKMAATQTGSGSKTNLYVHTEDA
HHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEECCCCHHHHCCCCCCCCEEEEEEECCE
FLLHQADFLSFLYLRNEERVPSTLYSVRSHGKVNKIMEKLFDPIYQCPKDANYQEEINDG
EEHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCC
PLASVLYGNKKLPFIRFDAAEQIFNENAGQTPEALYNLTEFWNEAKELINSDYIPDSGDV
CEEHEEECCCCCCEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
IFVNNHLCAHGRSAFTAGQKEENGKLVPCERRQMLRMMSKTSLIHIRSMTHTDDPYFVME
EEECCCHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHH
EHLGKVFDQA
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA