| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300901
Identifier: 146300901
GI number: 146300901
Start: 3749993
End: 3750283
Strand: Direct
Name: 146300901
Synonym: Fjoh_3156
Alternate gene names: NA
Gene position: 3749993-3750283 (Clockwise)
Preceding gene: 146300900
Following gene: 146300902
Centisome position: 61.51
GC content: 48.8
Gene sequence:
>291_bases ATGGGATTACCGGCCGCAAGAATTAACGATATGCATGTCTGCCCAATGGTAACAGCAACTGTTCCTCATGTTGGCGGACC AATTTTACCGCCAGGCTCGCCTACAGTTTTAATAGGCGGTCAGCCTGCAGCCTGTTTGGGAGATATGATTGTTTGTACAG GTCCGCCGGATAGTATCATCGCGGGTTCTAGTACAGTGCTGATTGGAGGAAAACCAGCAGCAAGAATGGGAGATTCAACC GCACATGGCGGCACAATTGTAATGGGATGCCCAACGGTTTTAATAGGTTAA
Upstream 100 bases:
>100_bases CACCTATGTGCATTTAAATTAGTGAAACGCCTTTTTTAAAGCTGCGGAGAACTATGTTTCTATGTGTTAAACAATTACAG CTAACTTAATAATTATAATT
Downstream 100 bases:
>100_bases TCATGGAAAATAAAGAAGCCTTTTTAGGTACAGGATGGAGTTTTCCGCCAGAGTTCAAAAAGAACAATAAAGCGGTCGTA ATGACATCTGACGAGACAGA
Product: PAAR repeat-containing protein
Products: NA
Alternate protein names: Type VI Secretion System Protein EvpJ; Type VI Secretion PAAR Domain Protein; PAAR Motif Family; Arylsulfatase A Family Protein; PAAR Domain-Containing Protein Containing Protein; Superfamily II DNA Helicase
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MGLPAARINDMHVCPMVTATVPHVGGPILPPGSPTVLIGGQPAACLGDMIVCTGPPDSIIAGSSTVLIGGKPAARMGDST AHGGTIVMGCPTVLIG
Sequences:
>Translated_96_residues MGLPAARINDMHVCPMVTATVPHVGGPILPPGSPTVLIGGQPAACLGDMIVCTGPPDSIIAGSSTVLIGGKPAARMGDST AHGGTIVMGCPTVLIG >Mature_95_residues GLPAARINDMHVCPMVTATVPHVGGPILPPGSPTVLIGGQPAACLGDMIVCTGPPDSIIAGSSTVLIGGKPAARMGDSTA HGGTIVMGCPTVLIG
Specific function: Unknown
COG id: COG4104
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9324; Mature: 9193
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 10.4 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 9.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLPAARINDMHVCPMVTATVPHVGGPILPPGSPTVLIGGQPAACLGDMIVCTGPPDSII CCCCCCCCCCEEECCEEEECCCCCCCCCCCCCCCEEEECCCCCHHCCCEEEEECCCCCEE AGSSTVLIGGKPAARMGDSTAHGGTIVMGCPTVLIG ECCCEEEECCCCCCCCCCCCCCCCEEEEECCEEEEC >Mature Secondary Structure GLPAARINDMHVCPMVTATVPHVGGPILPPGSPTVLIGGQPAACLGDMIVCTGPPDSII CCCCCCCCCEEECCEEEECCCCCCCCCCCCCCCEEEECCCCCHHCCCEEEEECCCCCEE AGSSTVLIGGKPAARMGDSTAHGGTIVMGCPTVLIG ECCCEEEECCCCCCCCCCCCCCCCEEEEECCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA