| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300900
Identifier: 146300900
GI number: 146300900
Start: 3748042
End: 3749787
Strand: Direct
Name: 146300900
Synonym: Fjoh_3155
Alternate gene names: NA
Gene position: 3748042-3749787 (Clockwise)
Preceding gene: 146300899
Following gene: 146300901
Centisome position: 61.47
GC content: 38.89
Gene sequence:
>1746_bases ATGAACAATAGCGGCGTCATACAAACCAGTAAAAGTGCAGATTTAGTTACGCACAAACTGCTCATTGAAGGAAATGAACT GTCTGGTGTTTATCAGGTTATGAGCATTGTTGTTCATAATGAGGTGAACAGAATCCCAATGGCGCAGATTGTTTTAACCG ATGGAGATGCATCGGCACAAGATTTTAAATTGAGTAATGAAGATTTGCTAATTCCGGGAAAAAAAATAGAAATAAAAGCG GGCTATCACAGTGATGAAGAAACCATTTACAAAGGAATTGTGGTAAAACATTCCATAAAAATAAAAGACAATTCTTCCCT GTTAATTGTAGAATGCAAAGACGAAGCGGTAAAACTGACTATTGGCAGAAAAAGCAAATATTTTTATGACGTAAAAGACA GTGACGCTTTTGAAGACATTATTGGCACTTATGGATTGCAAAAAGACGTAGAAAGCACTAATTATAGTCACAAAGAGTTA GTGCAGTACAATACTTCCGATTGGGATTTTATTGTGTCTCGTGCGCAGGCAAACGGAAAATTATGTTTTGTTGAAAATGG CAAAATTTCGATTAAAAAACCAGATTTAACTTCTGAACCAGTCGAAACGGTTGCTTTTGGTTCGAGTATGCTCGATTTTG ATGCCGAAATTGATGCCCGAAATCAGTTTGCTAAAGTTTCATCTTACAGCTGGAACGCATCCAATCAGGAATTATTAGAA ATTGAAGCCAAAGATCCAAGCGTAAGTCTAAACGGAAATTTATCTCCTTCGGATTTATCTGATATCGTAAAGCTTGAAAA TTTAGAATTGCGCCACGGCGGTCATGTTACCGATACCGAATTGCAAGATTGGGCCGATGCGAAATTATTATTCCAGCAGC TGTCAAAAGTTCGCGGAAGAGTAAAATTTCAAGGCATTCCCGCTGTAAAACCCAATACCATTATCACGCTTGAAGGCGTT GGAGACCGCTTTAACGGCAAAGCATACATTACGGGCGTTTTCCATGAAATTACAAACGGAAACTGGACCGTAAACGTGCA GTTTGGATTAAACCCCGAATGGTTTTCTGAAACGTATGATGTCAATACGCCGTCGGCATCAGGAATAATTCCATCCATAA AAGGACTGCATATTGGTATTGTAACCCAGCTTCAGGACGATCCCGATGGTGAAGACAGAATTTTGGTCAAAATCCCAATA ATCAATAACGACGAACAGGGCATTTGGTGCAGAATAGCTGTCTTAGATGCGGGTGACAACAGAGGTACTTTTTTCAGGCC GGAAATTGAAGACGAAGTAATTATCGGTTTCATCAACGAAGATCCAAATGATGCTATTGTATTGGGAATGCTCCACAGCA GCGCGAAACCTGCTCCTCTAAAAGCAGCCGACGATAATCATCAAAAAGGGATTTTTACAAGAAGTGAAATGAAAGTTCTT TTTGACGATGATAAAAAATCGATAGCCATTGAAACTCCGGCAGGCAAAAAAATAACACTAGACGAAGACAAAGGTTCAAT AGTTATTGAAGACGAAAATTCGAACATCATTACAATTGACAGCGCAGGAATAAAAATGGAAAGTGCGGGCGATATTTCAA TAAAAGCAACTGGCGATGTAAAAATTGAAGGCATGAATGTAAATCTAAAAGCAACTGCACAATTTAAAGCCGAAGGAAAT GCCGGCGCAGAAATGTCATCAGCAGCAGTGGCGATTGTAAAAGGCAGTATTGTACAAATAAATTAA
Upstream 100 bases:
>100_bases ATATTATCTCGAAGTAGCAAAAGCCAATAAGCTTATCAATTTCAGAAAATTAAAAATCGGCCAGAAAATATTTTTTCCTC CACTGCAAAAACAACAATAG
Downstream 100 bases:
>100_bases ATTATCTCTATTGCTTTCAATTTAAAAAATCTTTTAAACACATAGAAACATAGTTTTTTATGTCAAAAAAAGAAAGTAAA AGAACCCAGTTTCCACACAT
Product: Rhs element Vgr protein
Products: NA
Alternate protein names: VgrG Protein; Rhs Element Vgr Protein Family Protein; Phage Protein D; Phage Protein; Phosphoserine Phosphatase SerB
Number of amino acids: Translated: 581; Mature: 581
Protein sequence:
>581_residues MNNSGVIQTSKSADLVTHKLLIEGNELSGVYQVMSIVVHNEVNRIPMAQIVLTDGDASAQDFKLSNEDLLIPGKKIEIKA GYHSDEETIYKGIVVKHSIKIKDNSSLLIVECKDEAVKLTIGRKSKYFYDVKDSDAFEDIIGTYGLQKDVESTNYSHKEL VQYNTSDWDFIVSRAQANGKLCFVENGKISIKKPDLTSEPVETVAFGSSMLDFDAEIDARNQFAKVSSYSWNASNQELLE IEAKDPSVSLNGNLSPSDLSDIVKLENLELRHGGHVTDTELQDWADAKLLFQQLSKVRGRVKFQGIPAVKPNTIITLEGV GDRFNGKAYITGVFHEITNGNWTVNVQFGLNPEWFSETYDVNTPSASGIIPSIKGLHIGIVTQLQDDPDGEDRILVKIPI INNDEQGIWCRIAVLDAGDNRGTFFRPEIEDEVIIGFINEDPNDAIVLGMLHSSAKPAPLKAADDNHQKGIFTRSEMKVL FDDDKKSIAIETPAGKKITLDEDKGSIVIEDENSNIITIDSAGIKMESAGDISIKATGDVKIEGMNVNLKATAQFKAEGN AGAEMSSAAVAIVKGSIVQIN
Sequences:
>Translated_581_residues MNNSGVIQTSKSADLVTHKLLIEGNELSGVYQVMSIVVHNEVNRIPMAQIVLTDGDASAQDFKLSNEDLLIPGKKIEIKA GYHSDEETIYKGIVVKHSIKIKDNSSLLIVECKDEAVKLTIGRKSKYFYDVKDSDAFEDIIGTYGLQKDVESTNYSHKEL VQYNTSDWDFIVSRAQANGKLCFVENGKISIKKPDLTSEPVETVAFGSSMLDFDAEIDARNQFAKVSSYSWNASNQELLE IEAKDPSVSLNGNLSPSDLSDIVKLENLELRHGGHVTDTELQDWADAKLLFQQLSKVRGRVKFQGIPAVKPNTIITLEGV GDRFNGKAYITGVFHEITNGNWTVNVQFGLNPEWFSETYDVNTPSASGIIPSIKGLHIGIVTQLQDDPDGEDRILVKIPI INNDEQGIWCRIAVLDAGDNRGTFFRPEIEDEVIIGFINEDPNDAIVLGMLHSSAKPAPLKAADDNHQKGIFTRSEMKVL FDDDKKSIAIETPAGKKITLDEDKGSIVIEDENSNIITIDSAGIKMESAGDISIKATGDVKIEGMNVNLKATAQFKAEGN AGAEMSSAAVAIVKGSIVQIN >Mature_581_residues MNNSGVIQTSKSADLVTHKLLIEGNELSGVYQVMSIVVHNEVNRIPMAQIVLTDGDASAQDFKLSNEDLLIPGKKIEIKA GYHSDEETIYKGIVVKHSIKIKDNSSLLIVECKDEAVKLTIGRKSKYFYDVKDSDAFEDIIGTYGLQKDVESTNYSHKEL VQYNTSDWDFIVSRAQANGKLCFVENGKISIKKPDLTSEPVETVAFGSSMLDFDAEIDARNQFAKVSSYSWNASNQELLE IEAKDPSVSLNGNLSPSDLSDIVKLENLELRHGGHVTDTELQDWADAKLLFQQLSKVRGRVKFQGIPAVKPNTIITLEGV GDRFNGKAYITGVFHEITNGNWTVNVQFGLNPEWFSETYDVNTPSASGIIPSIKGLHIGIVTQLQDDPDGEDRILVKIPI INNDEQGIWCRIAVLDAGDNRGTFFRPEIEDEVIIGFINEDPNDAIVLGMLHSSAKPAPLKAADDNHQKGIFTRSEMKVL FDDDKKSIAIETPAGKKITLDEDKGSIVIEDENSNIITIDSAGIKMESAGDISIKATGDVKIEGMNVNLKATAQFKAEGN AGAEMSSAAVAIVKGSIVQIN
Specific function: Unknown
COG id: COG3500
COG function: function code R; Phage protein D
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63620; Mature: 63620
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNSGVIQTSKSADLVTHKLLIEGNELSGVYQVMSIVVHNEVNRIPMAQIVLTDGDASAQ CCCCCEEEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCC DFKLSNEDLLIPGKKIEIKAGYHSDEETIYKGIVVKHSIKIKDNSSLLIVECKDEAVKLT CEEECCCCEEECCCEEEEEECCCCCHHHEEEEEEEEEEEEEECCCCEEEEEECCCEEEEE IGRKSKYFYDVKDSDAFEDIIGTYGLQKDVESTNYSHKELVQYNTSDWDFIVSRAQANGK EECCCCEEEECCCCCHHHHHHHHCCCCCCHHHCCCCCHHHEEECCCCCEEEEEEECCCCC LCFVENGKISIKKPDLTSEPVETVAFGSSMLDFDAEIDARNQFAKVSSYSWNASNQELLE EEEEECCEEEEECCCCCCCCCHHEECCCCEEEECCCCCCCCCEEEEECEECCCCCCEEEE IEAKDPSVSLNGNLSPSDLSDIVKLENLELRHGGHVTDTELQDWADAKLLFQQLSKVRGR EEECCCCEEECCCCCHHHHHHHHEECCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCE VKFQGIPAVKPNTIITLEGVGDRFNGKAYITGVFHEITNGNWTVNVQFGLNPEWFSETYD EEEECCCCCCCCEEEEEECCCCCCCCEEEEEEEEEEECCCEEEEEEEECCCHHHCCCEEC VNTPSASGIIPSIKGLHIGIVTQLQDDPDGEDRILVKIPIINNDEQGIWCRIAVLDAGDN CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCEEEEEEEEECCCC RGTFFRPEIEDEVIIGFINEDPNDAIVLGMLHSSAKPAPLKAADDNHQKGIFTRSEMKVL CCCEECCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCEEEE FDDDKKSIAIETPAGKKITLDEDKGSIVIEDENSNIITIDSAGIKMESAGDISIKATGDV EECCCCEEEEECCCCCEEEEECCCCEEEEEECCCCEEEEECCCEEEECCCCEEEEEECCE KIEGMNVNLKATAQFKAEGNAGAEMSSAAVAIVKGSIVQIN EEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEECEEEEEC >Mature Secondary Structure MNNSGVIQTSKSADLVTHKLLIEGNELSGVYQVMSIVVHNEVNRIPMAQIVLTDGDASAQ CCCCCEEEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCC DFKLSNEDLLIPGKKIEIKAGYHSDEETIYKGIVVKHSIKIKDNSSLLIVECKDEAVKLT CEEECCCCEEECCCEEEEEECCCCCHHHEEEEEEEEEEEEEECCCCEEEEEECCCEEEEE IGRKSKYFYDVKDSDAFEDIIGTYGLQKDVESTNYSHKELVQYNTSDWDFIVSRAQANGK EECCCCEEEECCCCCHHHHHHHHCCCCCCHHHCCCCCHHHEEECCCCCEEEEEEECCCCC LCFVENGKISIKKPDLTSEPVETVAFGSSMLDFDAEIDARNQFAKVSSYSWNASNQELLE EEEEECCEEEEECCCCCCCCCHHEECCCCEEEECCCCCCCCCEEEEECEECCCCCCEEEE IEAKDPSVSLNGNLSPSDLSDIVKLENLELRHGGHVTDTELQDWADAKLLFQQLSKVRGR EEECCCCEEECCCCCHHHHHHHHEECCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCE VKFQGIPAVKPNTIITLEGVGDRFNGKAYITGVFHEITNGNWTVNVQFGLNPEWFSETYD EEEECCCCCCCCEEEEEECCCCCCCCEEEEEEEEEEECCCEEEEEEEECCCHHHCCCEEC VNTPSASGIIPSIKGLHIGIVTQLQDDPDGEDRILVKIPIINNDEQGIWCRIAVLDAGDN CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCEEEEEEEEECCCC RGTFFRPEIEDEVIIGFINEDPNDAIVLGMLHSSAKPAPLKAADDNHQKGIFTRSEMKVL CCCEECCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCEEEE FDDDKKSIAIETPAGKKITLDEDKGSIVIEDENSNIITIDSAGIKMESAGDISIKATGDV EECCCCEEEEECCCCCEEEEECCCCEEEEEECCCCEEEEECCCEEEECCCCEEEEEECCE KIEGMNVNLKATAQFKAEGNAGAEMSSAAVAIVKGSIVQIN EEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEECEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA