| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146300889
Identifier: 146300889
GI number: 146300889
Start: 3735605
End: 3736168
Strand: Reverse
Name: 146300889
Synonym: Fjoh_3144
Alternate gene names: NA
Gene position: 3736168-3735605 (Counterclockwise)
Preceding gene: 146300891
Following gene: 146300888
Centisome position: 61.28
GC content: 31.91
Gene sequence:
>564_bases ATGAAAAAGGATAAAATACTATTAAAAGCCTGCTCTTGGGCAGGATATGTAACAGGAAATGCTTTTAAGGCAATTGATGT TTTTTTTGATTTTGCACATCTGGATTATTACAAACAAAACTTAAGTGAAGCCGTAATTTTGAGTTATAAAAAAAACATCT ACAAAGAAAACAATCCTTCTGATGCTTTTGTTTTTTATACGGCTTTAAACTTTTTTTCTAAAGTTTGTTTCTGTCTGCAA GGCAAAAGCAAAAAATGGAAACTAAAAGAATCCCTGCGCTGCGAAAAGGTTTTTCATCTTTCATCTCTCACAAAAGAAGA ATACGAGAATCCTTTTATAGTATTTCAAAAAGCATTTGATGAAATTACGCTCGAAAAGTTTGAATTTTTTCTAAGTCAAA TTCTCGAGCATTCATTGTCTCCTTTTGCCGGAGATCCAGAATCTGACATGGCAACACCTTATATTCATTTTATCAAAATG CTCGATGCAGCAGAATTAATACGAGAAAGAGGAGTTGAAAAAATCAAGAAAACGGTTGAGATTGATTTAGAATTTAGGAC TTAA
Upstream 100 bases:
>100_bases CAAAAAGAGATTTTTTTGTAAGAATATTATATCTGTATTTCGAATAAGTTATCCTTTTAAAAGCATATTACTTTGCCGGT AAATTTTAAATGTTCTGACT
Downstream 100 bases:
>100_bases AAAACTTTGTTGCAAGTTATAATCTGCAACATCATTAAAAAGTTTTGTAATACGCAGGTTTGTAAATTAGTGGGTATCAC TAAAACTAGAAATATGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MKKDKILLKACSWAGYVTGNAFKAIDVFFDFAHLDYYKQNLSEAVILSYKKNIYKENNPSDAFVFYTALNFFSKVCFCLQ GKSKKWKLKESLRCEKVFHLSSLTKEEYENPFIVFQKAFDEITLEKFEFFLSQILEHSLSPFAGDPESDMATPYIHFIKM LDAAELIRERGVEKIKKTVEIDLEFRT
Sequences:
>Translated_187_residues MKKDKILLKACSWAGYVTGNAFKAIDVFFDFAHLDYYKQNLSEAVILSYKKNIYKENNPSDAFVFYTALNFFSKVCFCLQ GKSKKWKLKESLRCEKVFHLSSLTKEEYENPFIVFQKAFDEITLEKFEFFLSQILEHSLSPFAGDPESDMATPYIHFIKM LDAAELIRERGVEKIKKTVEIDLEFRT >Mature_187_residues MKKDKILLKACSWAGYVTGNAFKAIDVFFDFAHLDYYKQNLSEAVILSYKKNIYKENNPSDAFVFYTALNFFSKVCFCLQ GKSKKWKLKESLRCEKVFHLSSLTKEEYENPFIVFQKAFDEITLEKFEFFLSQILEHSLSPFAGDPESDMATPYIHFIKM LDAAELIRERGVEKIKKTVEIDLEFRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21898; Mature: 21898
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKDKILLKACSWAGYVTGNAFKAIDVFFDFAHLDYYKQNLSEAVILSYKKNIYKENNPS CCCCHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DAFVFYTALNFFSKVCFCLQGKSKKWKLKESLRCEKVFHLSSLTKEEYENPFIVFQKAFD CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH EITLEKFEFFLSQILEHSLSPFAGDPESDMATPYIHFIKMLDAAELIRERGVEKIKKTVE HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHE IDLEFRT EEEEECC >Mature Secondary Structure MKKDKILLKACSWAGYVTGNAFKAIDVFFDFAHLDYYKQNLSEAVILSYKKNIYKENNPS CCCCHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DAFVFYTALNFFSKVCFCLQGKSKKWKLKESLRCEKVFHLSSLTKEEYENPFIVFQKAFD CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH EITLEKFEFFLSQILEHSLSPFAGDPESDMATPYIHFIKMLDAAELIRERGVEKIKKTVE HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHE IDLEFRT EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA