| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is aslA [H]
Identifier: 146300887
GI number: 146300887
Start: 3731528
End: 3733102
Strand: Reverse
Name: aslA [H]
Synonym: Fjoh_3142
Alternate gene names: 146300887
Gene position: 3733102-3731528 (Counterclockwise)
Preceding gene: 146300888
Following gene: 146300884
Centisome position: 61.23
GC content: 38.48
Gene sequence:
>1575_bases ATGAGAAAGTATATTGTTTTATTAGCTTTAGCTTTAGTTGCTGAAATGAGCGCACAGCAAAACTATTTTAACCCAACGGT TAAAGTAAAAGACTATTTAGAGCCTGCAATTCCGCATCCAGATCAGGATAAAGAAATGAAGGATAAATTGAGCAAATTAA AGAAGAAACCGAATATCCTGATTATTCTTATTGATGATATGGGTTACGGAGATATTGGTGTTTATGGCGGAGGCGTCGCG ATTGGTGCGCCAACTCCAAACATGGATAAACTGGCTCATGAAGGTTTACAGCTTACTTCAACCTATGCACAGCCAACTTG TACACCAAGCCGTGCAGCAATTATGACGGGAAGAATTCCGGCAAGATCAGGTTTGACAAGACCAACACTTACAGGTGAAA ATCCGAAAGTAAATCCGTGGGCTTCAGAAAATACAACGGCTAAAATACTTTCTCAAAACGGTTATAAATCGGCTATTTCA GGTAAATGGCATTTGGGCGAAAGTAAAGGAAGTCTGCCAAACGAAGTTGGTTATGATGAATGGCTGGGATTTGGTTCTGT TCAGTCAGAATACGCACAGTTTGTTAATGAGTGGATTTATCCAGATTTAATCAATAAACCAGATCGATTGGCTGCAGTGA AAAAAATGGTAGACCAAAATATCTTAACTGGTGTAAAGGGAGGAGAAAACAAGGTTGTACAGCCTATATCAAATATTGAA GAACTTTCTAAAGTCGATCAGGTTTTTGCAAACTACAGCGAAGATTTCATCAAACGTTCGGTAAAAGAAAATAAGCCTTT CTATTTAATTCATTCTTTTTCTAAAGTGCATAATGACAACTATGTATCTGAAGGTTATAAAGGAAAAAGCCCTGCAGCAA TTCCGTATAAAGATGCTATTGTTGAAGTAGATGACATTGTGGGCAGACTGATGAAACTTTTGCAGGACTTAAAAATTGAC GACAATACATTAGTATTCCTTACTTCTGACAACGGTCCAAATGAAGATGTTTGGCCAGATGGCGGTTATACACCCTTTAG AGGAGGAAAAGGCACAACTTGGGAAGGTGGAGTTAGAGTTCCGGGAATTGCTTACTGGAAAGGCATGATAGCTCCGGGAC GTATAAGCGATGGTTTGTTTGATATTTGCGATATGTTTAATACTTCTCTTTCGGCAGCAGGAGTTTTAGATAAAATTCCT TCAAGTAATTATATTGATGGAGTAGATCAGTTATCGTTTTTCTTGTCAGACAAAGGAGTGTCGAATCGAAATGCCGTTTT TATGTATTCAGAAACCAAATTTATGGCTATTCGCTGGCAGGAATACAAAGTACACATGAATGTTTTTAATACTTCGGCGA CAAGAAGAAATCTGGACCAATCGACTATTCAAAGTATTGGGATGAGTCCGTGGGTATACAATATTTACGCAGACCCAAAA GAACAATTGAGTCAGGGACACCGTTATTTTGAGTGGGGAATCCCAGGCGTAATGGGACTTATTGCAGCTCACTTAGCTAC TTATCAAAAATATCCAATGAAAGATATTGGTTTGAAAAAACCGGGTGCTGAGTAA
Upstream 100 bases:
>100_bases TTCGTATAAGCTTCCATTTAAGTTTACGGGAATTATTGATAAGGTCGAGATTGACTTGAAATAATTGTGAATTAAAAATT TTAGCATAAATCAAAGAATT
Downstream 100 bases:
>100_bases TGATTTATAAAATTATTTAGTAAGTATGAAAACAGAAAACTCCTTTTTATACAGGGCAGTTTTCTGTTTTTATTTTGAAT GGCTATCTCTTTTAGTTATA
Product: sulfatase
Products: NA
Alternate protein names: AS; Aryl-sulfate sulphohydrolase [H]
Number of amino acids: Translated: 524; Mature: 524
Protein sequence:
>524_residues MRKYIVLLALALVAEMSAQQNYFNPTVKVKDYLEPAIPHPDQDKEMKDKLSKLKKKPNILIILIDDMGYGDIGVYGGGVA IGAPTPNMDKLAHEGLQLTSTYAQPTCTPSRAAIMTGRIPARSGLTRPTLTGENPKVNPWASENTTAKILSQNGYKSAIS GKWHLGESKGSLPNEVGYDEWLGFGSVQSEYAQFVNEWIYPDLINKPDRLAAVKKMVDQNILTGVKGGENKVVQPISNIE ELSKVDQVFANYSEDFIKRSVKENKPFYLIHSFSKVHNDNYVSEGYKGKSPAAIPYKDAIVEVDDIVGRLMKLLQDLKID DNTLVFLTSDNGPNEDVWPDGGYTPFRGGKGTTWEGGVRVPGIAYWKGMIAPGRISDGLFDICDMFNTSLSAAGVLDKIP SSNYIDGVDQLSFFLSDKGVSNRNAVFMYSETKFMAIRWQEYKVHMNVFNTSATRRNLDQSTIQSIGMSPWVYNIYADPK EQLSQGHRYFEWGIPGVMGLIAAHLATYQKYPMKDIGLKKPGAE
Sequences:
>Translated_524_residues MRKYIVLLALALVAEMSAQQNYFNPTVKVKDYLEPAIPHPDQDKEMKDKLSKLKKKPNILIILIDDMGYGDIGVYGGGVA IGAPTPNMDKLAHEGLQLTSTYAQPTCTPSRAAIMTGRIPARSGLTRPTLTGENPKVNPWASENTTAKILSQNGYKSAIS GKWHLGESKGSLPNEVGYDEWLGFGSVQSEYAQFVNEWIYPDLINKPDRLAAVKKMVDQNILTGVKGGENKVVQPISNIE ELSKVDQVFANYSEDFIKRSVKENKPFYLIHSFSKVHNDNYVSEGYKGKSPAAIPYKDAIVEVDDIVGRLMKLLQDLKID DNTLVFLTSDNGPNEDVWPDGGYTPFRGGKGTTWEGGVRVPGIAYWKGMIAPGRISDGLFDICDMFNTSLSAAGVLDKIP SSNYIDGVDQLSFFLSDKGVSNRNAVFMYSETKFMAIRWQEYKVHMNVFNTSATRRNLDQSTIQSIGMSPWVYNIYADPK EQLSQGHRYFEWGIPGVMGLIAAHLATYQKYPMKDIGLKKPGAE >Mature_524_residues MRKYIVLLALALVAEMSAQQNYFNPTVKVKDYLEPAIPHPDQDKEMKDKLSKLKKKPNILIILIDDMGYGDIGVYGGGVA IGAPTPNMDKLAHEGLQLTSTYAQPTCTPSRAAIMTGRIPARSGLTRPTLTGENPKVNPWASENTTAKILSQNGYKSAIS GKWHLGESKGSLPNEVGYDEWLGFGSVQSEYAQFVNEWIYPDLINKPDRLAAVKKMVDQNILTGVKGGENKVVQPISNIE ELSKVDQVFANYSEDFIKRSVKENKPFYLIHSFSKVHNDNYVSEGYKGKSPAAIPYKDAIVEVDDIVGRLMKLLQDLKID DNTLVFLTSDNGPNEDVWPDGGYTPFRGGKGTTWEGGVRVPGIAYWKGMIAPGRISDGLFDICDMFNTSLSAAGVLDKIP SSNYIDGVDQLSFFLSDKGVSNRNAVFMYSETKFMAIRWQEYKVHMNVFNTSATRRNLDQSTIQSIGMSPWVYNIYADPK EQLSQGHRYFEWGIPGVMGLIAAHLATYQKYPMKDIGLKKPGAE
Specific function: Unknown
COG id: COG3119
COG function: function code P; Arylsulfatase A and related enzymes
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sulfatase family [H]
Homologues:
Organism=Homo sapiens, GI4503899, Length=456, Percent_Identity=33.7719298245614, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI146229331, Length=449, Percent_Identity=30.7349665924276, Blast_Score=199, Evalue=7e-51, Organism=Homo sapiens, GI146229329, Length=449, Percent_Identity=30.7349665924276, Blast_Score=199, Evalue=7e-51, Organism=Homo sapiens, GI6005990, Length=449, Percent_Identity=30.7349665924276, Blast_Score=199, Evalue=7e-51, Organism=Homo sapiens, GI146229324, Length=449, Percent_Identity=30.7349665924276, Blast_Score=199, Evalue=7e-51, Organism=Homo sapiens, GI45430057, Length=477, Percent_Identity=29.3501048218029, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI157266309, Length=512, Percent_Identity=27.9296875, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI146229327, Length=360, Percent_Identity=27.7777777777778, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI31742482, Length=513, Percent_Identity=25.5360623781676, Blast_Score=137, Evalue=3e-32, Organism=Homo sapiens, GI71852584, Length=456, Percent_Identity=27.1929824561404, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI58743319, Length=444, Percent_Identity=27.9279279279279, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI59797060, Length=494, Percent_Identity=25.5060728744939, Blast_Score=131, Evalue=2e-30, Organism=Homo sapiens, GI109389362, Length=522, Percent_Identity=24.7126436781609, Blast_Score=129, Evalue=6e-30, Organism=Homo sapiens, GI38569407, Length=345, Percent_Identity=26.6666666666667, Blast_Score=113, Evalue=5e-25, Organism=Homo sapiens, GI38569405, Length=311, Percent_Identity=27.3311897106109, Blast_Score=113, Evalue=5e-25, Organism=Homo sapiens, GI53831991, Length=215, Percent_Identity=31.6279069767442, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI71852586, Length=143, Percent_Identity=40.5594405594406, Blast_Score=94, Evalue=3e-19, Organism=Escherichia coli, GI1790233, Length=508, Percent_Identity=38.7795275590551, Blast_Score=362, Evalue=1e-101, Organism=Escherichia coli, GI87081924, Length=433, Percent_Identity=27.2517321016166, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI1790112, Length=230, Percent_Identity=25.2173913043478, Blast_Score=70, Evalue=4e-13, Organism=Caenorhabditis elegans, GI115533416, Length=418, Percent_Identity=27.9904306220096, Blast_Score=123, Evalue=3e-28, Organism=Caenorhabditis elegans, GI115533418, Length=410, Percent_Identity=27.3170731707317, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17559078, Length=275, Percent_Identity=29.4545454545455, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24666109, Length=382, Percent_Identity=29.5811518324607, Blast_Score=140, Evalue=3e-33, Organism=Drosophila melanogaster, GI281363223, Length=395, Percent_Identity=28.3544303797468, Blast_Score=135, Evalue=9e-32, Organism=Drosophila melanogaster, GI24666175, Length=373, Percent_Identity=28.4182305630027, Blast_Score=132, Evalue=7e-31, Organism=Drosophila melanogaster, GI281366397, Length=354, Percent_Identity=27.4011299435028, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI281366395, Length=354, Percent_Identity=27.4011299435028, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI24666163, Length=354, Percent_Identity=27.4011299435028, Blast_Score=120, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: =3.1.6.1 [H]
Molecular weight: Translated: 58201; Mature: 58201
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: PS00523 SULFATASE_1 ; PS00149 SULFATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKYIVLLALALVAEMSAQQNYFNPTVKVKDYLEPAIPHPDQDKEMKDKLSKLKKKPNIL CCHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEE IILIDDMGYGDIGVYGGGVAIGAPTPNMDKLAHEGLQLTSTYAQPTCTPSRAAIMTGRIP EEEECCCCCCCEEEECCCEEECCCCCCHHHHHHCCCEEEECCCCCCCCCCCCEEEECCCC ARSGLTRPTLTGENPKVNPWASENTTAKILSQNGYKSAISGKWHLGESKGSLPNEVGYDE CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHCCCCEEECCCCCCCCCCCCHHH WLGFGSVQSEYAQFVNEWIYPDLINKPDRLAAVKKMVDQNILTGVKGGENKVVQPISNIE HHCCCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH ELSKVDQVFANYSEDFIKRSVKENKPFYLIHSFSKVHNDNYVSEGYKGKSPAAIPYKDAI HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHCCCCCHHCCCCCCCCCCCCHHHHH VEVDDIVGRLMKLLQDLKIDDNTLVFLTSDNGPNEDVWPDGGYTPFRGGKGTTWEGGVRV EEHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGIAYWKGMIAPGRISDGLFDICDMFNTSLSAAGVLDKIPSSNYIDGVDQLSFFLSDKGV CCHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC SNRNAVFMYSETKFMAIRWQEYKVHMNVFNTSATRRNLDQSTIQSIGMSPWVYNIYADPK CCCCEEEEEECCEEEEEEEEEEEEEEEEECCCHHHHCCCHHHHHHCCCCCEEEEEECCCH EQLSQGHRYFEWGIPGVMGLIAAHLATYQKYPMKDIGLKKPGAE HHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCC >Mature Secondary Structure MRKYIVLLALALVAEMSAQQNYFNPTVKVKDYLEPAIPHPDQDKEMKDKLSKLKKKPNIL CCHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEE IILIDDMGYGDIGVYGGGVAIGAPTPNMDKLAHEGLQLTSTYAQPTCTPSRAAIMTGRIP EEEECCCCCCCEEEECCCEEECCCCCCHHHHHHCCCEEEECCCCCCCCCCCCEEEECCCC ARSGLTRPTLTGENPKVNPWASENTTAKILSQNGYKSAISGKWHLGESKGSLPNEVGYDE CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHCCCCEEECCCCCCCCCCCCHHH WLGFGSVQSEYAQFVNEWIYPDLINKPDRLAAVKKMVDQNILTGVKGGENKVVQPISNIE HHCCCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH ELSKVDQVFANYSEDFIKRSVKENKPFYLIHSFSKVHNDNYVSEGYKGKSPAAIPYKDAI HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHCCCCCHHCCCCCCCCCCCCHHHHH VEVDDIVGRLMKLLQDLKIDDNTLVFLTSDNGPNEDVWPDGGYTPFRGGKGTTWEGGVRV EEHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGIAYWKGMIAPGRISDGLFDICDMFNTSLSAAGVLDKIPSSNYIDGVDQLSFFLSDKGV CCHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC SNRNAVFMYSETKFMAIRWQEYKVHMNVFNTSATRRNLDQSTIQSIGMSPWVYNIYADPK CCCCEEEEEECCEEEEEEEEEEEEEEEEECCCHHHHCCCHHHHHHCCCCCEEEEEECCCH EQLSQGHRYFEWGIPGVMGLIAAHLATYQKYPMKDIGLKKPGAE HHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1379743; 9278503 [H]