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The map label for this gene is peh [H]

Identifier: 146300859

GI number: 146300859

Start: 3687574

End: 3689013

Strand: Reverse

Name: peh [H]

Synonym: Fjoh_3114

Alternate gene names: 146300859

Gene position: 3689013-3687574 (Counterclockwise)

Preceding gene: 146300860

Following gene: 146300858

Centisome position: 60.51

GC content: 36.81

Gene sequence:

>1440_bases
ATGAAAAAGAAATCCATAATCGCGATCCTAATTTTCTGTATTTCCTTAACTGTTTCTGCGCAGAAAATCTACGACGTTAA
AAAGTACGGTGCAAAAGGAGACGGAAAAACGAACGATGCAGCAGCGATTCAAAAAGCAATTGATGAATGCAGTAAAACAG
GAGGAAGAGTTTTAATTCCGGCACCGTTTACGTTTTTGGCTGGACCGTTTGATGTAAAATCAAAAGTAGATTTACATATC
GAAGCCGGAGCAAAATTATTGGCAAGTCCAGATGAGAAATTATATACCAAAAGCGCTTTTAGAACCAATCCCGGAGAAGG
AACGATTTGGATTGGAGGAGAAAATATTGAGGATTTTACCATTAGCGGCAGCGGCAAAATTGACGGAAACGGAATCTCTT
TTATGGGCGAAGAACAAGAAGATGCTTATGTACTGAAACCTTTTAATGTTTTAGATCCAAGACCTCACGTTTTGACAATT
ATCGGCGGTAAAAATATTAGAATTCATGATGTGCATATCGGAAATTCAGCGTATTGGACGATTCATTTAGTGGGCTGTAA
CGATGTTGTAATCAGCGGGATTACTTTATTGAACAGCTTGAAAGTCCGCAATAGCGACGGAATAGATTTGGATCATTCTA
AAAATGTTAGAATCAGCGATTGTTATATCGAAAGCGGTGACGATTGTATTTGTTTAAAAAACCGCAGAGAGTTTGAAGAA
TTCGGTGCCTGCGAAAATATTACCGTAACCAATTGTACCATGACTAGCAGCAGCTGCGCCATTAAAATTGGTTCGGAAAA
TATGGATGCGATTCGACAAGTCGTTTTCAACAATTGTATCATTAAAAACAGTAATCGCGCTTTAGGAATTCAGAATCGTG
ATGAAGGAACTGTAAGCGATGTTATTTTCTCCAATATTATTGTTGAAAGCAAATTAAATACAGATACCTGGTGGGGAAAA
GCAGAACCGATTTATGTAACAGCTTTTAGCAGAGCAAAAGGAAATCATAAAGATGCGAACTGGCGTTTTCCGAAAGGTGC
GACTGAAGGGAAAGTGGGCGAAATCAAAAATATCTATTTTTCTAATATTCAGTGTACTGGAGAAAATGGCGTGTTTGTAA
GCGGCGAATCTAAAGACAAAATCCAGAATATAGTTTTTGATAATGTGAGTGTTTTTATGGATAAAACGACTTCTTTTCCG
GGAGGATTATATGACAGACGTCCGGCTAATGTTGAAGGTTTTGTAAAAGGAAGTACTTCTGGATTTTATTTTGAAAATGC
AGAACGTATTAAGGTTCAAAACTGTACTGTACAATGGGGAAAAAACAAACCAGATTATTTTAAATATGCTGTCGAAAGTA
AAAATGTAGATTCTTTAATTATTACTAATTTAGACGGACAGGCCGCTTTTCCTGAAAAATTAGAAGCCGTAAAAAAATAA

Upstream 100 bases:

>100_bases
TGTATTGATGCAAGTGAAACGCCTTTTTAGCCAAAGAATAACTATGTTTCTATGTGTTTAATATTAATCAGACCAATTGG
TTTTAATAAACAAAAATAAA

Downstream 100 bases:

>100_bases
AGATTTGACTATTTCCAAAAAACTATGAAAAATAACTTCCTTTCTAAATCCATTTTTGGCTGTTTATTGTTGAGCAGTCT
TTATACAAATGCACAAAAAG

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MKKKSIIAILIFCISLTVSAQKIYDVKKYGAKGDGKTNDAAAIQKAIDECSKTGGRVLIPAPFTFLAGPFDVKSKVDLHI
EAGAKLLASPDEKLYTKSAFRTNPGEGTIWIGGENIEDFTISGSGKIDGNGISFMGEEQEDAYVLKPFNVLDPRPHVLTI
IGGKNIRIHDVHIGNSAYWTIHLVGCNDVVISGITLLNSLKVRNSDGIDLDHSKNVRISDCYIESGDDCICLKNRREFEE
FGACENITVTNCTMTSSSCAIKIGSENMDAIRQVVFNNCIIKNSNRALGIQNRDEGTVSDVIFSNIIVESKLNTDTWWGK
AEPIYVTAFSRAKGNHKDANWRFPKGATEGKVGEIKNIYFSNIQCTGENGVFVSGESKDKIQNIVFDNVSVFMDKTTSFP
GGLYDRRPANVEGFVKGSTSGFYFENAERIKVQNCTVQWGKNKPDYFKYAVESKNVDSLIITNLDGQAAFPEKLEAVKK

Sequences:

>Translated_479_residues
MKKKSIIAILIFCISLTVSAQKIYDVKKYGAKGDGKTNDAAAIQKAIDECSKTGGRVLIPAPFTFLAGPFDVKSKVDLHI
EAGAKLLASPDEKLYTKSAFRTNPGEGTIWIGGENIEDFTISGSGKIDGNGISFMGEEQEDAYVLKPFNVLDPRPHVLTI
IGGKNIRIHDVHIGNSAYWTIHLVGCNDVVISGITLLNSLKVRNSDGIDLDHSKNVRISDCYIESGDDCICLKNRREFEE
FGACENITVTNCTMTSSSCAIKIGSENMDAIRQVVFNNCIIKNSNRALGIQNRDEGTVSDVIFSNIIVESKLNTDTWWGK
AEPIYVTAFSRAKGNHKDANWRFPKGATEGKVGEIKNIYFSNIQCTGENGVFVSGESKDKIQNIVFDNVSVFMDKTTSFP
GGLYDRRPANVEGFVKGSTSGFYFENAERIKVQNCTVQWGKNKPDYFKYAVESKNVDSLIITNLDGQAAFPEKLEAVKK
>Mature_479_residues
MKKKSIIAILIFCISLTVSAQKIYDVKKYGAKGDGKTNDAAAIQKAIDECSKTGGRVLIPAPFTFLAGPFDVKSKVDLHI
EAGAKLLASPDEKLYTKSAFRTNPGEGTIWIGGENIEDFTISGSGKIDGNGISFMGEEQEDAYVLKPFNVLDPRPHVLTI
IGGKNIRIHDVHIGNSAYWTIHLVGCNDVVISGITLLNSLKVRNSDGIDLDHSKNVRISDCYIESGDDCICLKNRREFEE
FGACENITVTNCTMTSSSCAIKIGSENMDAIRQVVFNNCIIKNSNRALGIQNRDEGTVSDVIFSNIIVESKLNTDTWWGK
AEPIYVTAFSRAKGNHKDANWRFPKGATEGKVGEIKNIYFSNIQCTGENGVFVSGESKDKIQNIVFDNVSVFMDKTTSFP
GGLYDRRPANVEGFVKGSTSGFYFENAERIKVQNCTVQWGKNKPDYFKYAVESKNVDSLIITNLDGQAAFPEKLEAVKK

Specific function: Involved in maceration and soft-rotting of plant tissue [H]

COG id: COG5434

COG function: function code M; Endopolygalacturonase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 28 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000743
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF00295 Glyco_hydro_28 [H]

EC number: =3.2.1.15 [H]

Molecular weight: Translated: 52676; Mature: 52676

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKSIIAILIFCISLTVSAQKIYDVKKYGAKGDGKTNDAAAIQKAIDECSKTGGRVLIP
CCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEC
APFTFLAGPFDVKSKVDLHIEAGAKLLASPDEKLYTKSAFRTNPGEGTIWIGGENIEDFT
CCHHHHCCCCCCCCEEEEEEECCCEEECCCCHHHEEHHHCCCCCCCEEEEECCCCCEEEE
ISGSGKIDGNGISFMGEEQEDAYVLKPFNVLDPRPHVLTIIGGKNIRIHDVHIGNSAYWT
EECCCEECCCCEEECCCCCCCEEEECCCCCCCCCCCEEEEECCCEEEEEEEEECCEEEEE
IHLVGCNDVVISGITLLNSLKVRNSDGIDLDHSKNVRISDCYIESGDDCICLKNRREFEE
EEEEECCHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCHHH
FGACENITVTNCTMTSSSCAIKIGSENMDAIRQVVFNNCIIKNSNRALGIQNRDEGTVSD
HCCCCCEEEEEEEEECCCEEEEECCCCHHHHHHHHHCCEEEECCCCEEEECCCCCCHHHH
VIFSNIIVESKLNTDTWWGKAEPIYVTAFSRAKGNHKDANWRFPKGATEGKVGEIKNIYF
HHHHHEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEECCCCCCCCCCCCEEEEEE
SNIQCTGENGVFVSGESKDKIQNIVFDNVSVFMDKTTSFPGGLYDRRPANVEGFVKGSTS
EEEEEECCCCEEEECCCHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCC
GFYFENAERIKVQNCTVQWGKNKPDYFKYAVESKNVDSLIITNLDGQAAFPEKLEAVKK
CEEECCCCEEEEEEEEEEECCCCCCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MKKKSIIAILIFCISLTVSAQKIYDVKKYGAKGDGKTNDAAAIQKAIDECSKTGGRVLIP
CCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEC
APFTFLAGPFDVKSKVDLHIEAGAKLLASPDEKLYTKSAFRTNPGEGTIWIGGENIEDFT
CCHHHHCCCCCCCCEEEEEEECCCEEECCCCHHHEEHHHCCCCCCCEEEEECCCCCEEEE
ISGSGKIDGNGISFMGEEQEDAYVLKPFNVLDPRPHVLTIIGGKNIRIHDVHIGNSAYWT
EECCCEECCCCEEECCCCCCCEEEECCCCCCCCCCCEEEEECCCEEEEEEEEECCEEEEE
IHLVGCNDVVISGITLLNSLKVRNSDGIDLDHSKNVRISDCYIESGDDCICLKNRREFEE
EEEEECCHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCHHH
FGACENITVTNCTMTSSSCAIKIGSENMDAIRQVVFNNCIIKNSNRALGIQNRDEGTVSD
HCCCCCEEEEEEEEECCCEEEEECCCCHHHHHHHHHCCEEEECCCCEEEECCCCCCHHHH
VIFSNIIVESKLNTDTWWGKAEPIYVTAFSRAKGNHKDANWRFPKGATEGKVGEIKNIYF
HHHHHEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEECCCCCCCCCCCCEEEEEE
SNIQCTGENGVFVSGESKDKIQNIVFDNVSVFMDKTTSFPGGLYDRRPANVEGFVKGSTS
EEEEEECCCCEEEECCCHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCC
GFYFENAERIKVQNCTVQWGKNKPDYFKYAVESKNVDSLIITNLDGQAAFPEKLEAVKK
CEEECCCCEEEEEEEEEEECCCCCCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2215211; 8074530; 8407675 [H]