Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146300810

Identifier: 146300810

GI number: 146300810

Start: 3630744

End: 3631595

Strand: Direct

Name: 146300810

Synonym: Fjoh_3064

Alternate gene names: NA

Gene position: 3630744-3631595 (Clockwise)

Preceding gene: 146300809

Following gene: 146300811

Centisome position: 59.55

GC content: 37.09

Gene sequence:

>852_bases
ATGAAATCAATTCAAAAAGGATTGATGGCAATCACTCTATTGCTGTCAGTCATAGTGTTTGGCGCACCTATAAAAAATGC
AAAAAACATAAATGCAAAAATTTATGGTAATTGTTTAATGTGCAAAACTGCTATTGAAAAAGCAGGAAACATCAAAAATA
TCGCTTCGGTAAACTGGAATGAAAACACCAAAATAGCGGCTATTACCTATGATGAGAAGAAAACAAATCAGGATGAAGTC
CTGAAAAGAATTGCCTTAGCAGGATATGACAGCGACCAGTTCTTAGCTCCTGGTGACGCCTATGCAAAACTTCCACAATG
CTGCCAATATGAAAGAACAAATATGGCGGCTCCAATAAAAAAATCCGAAATGGATATGGGTAAAATGGATCATTCACAGC
ATACAGCCGCAGTTCCTGCAGATGCACAAGAAAACAGTCCTTTTAAAGCAATTTTCGACAGCTACTTTGATGTAAAAGAT
GCTTTGGTGAAAACAGATGCTAAAACTGCCGCATTGAAATCTAAAGAGCTCCTTACTGCAATCAATGCTATTAAAATGGA
GAACCTAAAGCCAAAAGAACATACTGCATGGATGAATGCAATGAAAAGTTTAGCTTCAGATGCCACAAATATTTCTGAAA
ACCAAGATGTAAAAAAGCAAAGGGAATCCTTTAAAAGCCTTTCCAAAAACACGTACGATCTTATAAAAACTGCTGATCAG
CCGCAGCCGGTTTATTATAATCATTGTCCAATGGTTGATGCGAATTGGCTCAGCAAAGAAAGCGGCATCAAGAATCCGTA
TTACGGTTCACAGATGTTAAGCTGTGGATCAACTATAGAAACAATCAAATAA

Upstream 100 bases:

>100_bases
TTCATTTTTTTATTTTTCGCTTTTTGTAGAATAATTCTCTATACAGTTCTTGTATGCAATTATTTCTCAAAAGCAATATT
CACTTCAAATACATTTTAAA

Downstream 100 bases:

>100_bases
TCCCAAATCAAAAAATGAAAAATATAATAACCGTTAGTTCAATGCTTGGAGTTTTAATTTTAGGGACCGTTTCGCTGTTT
TCTTGCAGTAAAATGGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: Efflux Transporter RND Family MFP Subunit; HlyD Family Secretion Protein; Efflux Transporter Rnd Family Mfp Subunit; Cation Efflux System Transmembrane Protein; Nb-Dependent Receptor; Heavy Metal Transporter; Cation-Transporting ATPase; Co/Zn/Cd Efflux System Membrane Fusion Protein

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MKSIQKGLMAITLLLSVIVFGAPIKNAKNINAKIYGNCLMCKTAIEKAGNIKNIASVNWNENTKIAAITYDEKKTNQDEV
LKRIALAGYDSDQFLAPGDAYAKLPQCCQYERTNMAAPIKKSEMDMGKMDHSQHTAAVPADAQENSPFKAIFDSYFDVKD
ALVKTDAKTAALKSKELLTAINAIKMENLKPKEHTAWMNAMKSLASDATNISENQDVKKQRESFKSLSKNTYDLIKTADQ
PQPVYYNHCPMVDANWLSKESGIKNPYYGSQMLSCGSTIETIK

Sequences:

>Translated_283_residues
MKSIQKGLMAITLLLSVIVFGAPIKNAKNINAKIYGNCLMCKTAIEKAGNIKNIASVNWNENTKIAAITYDEKKTNQDEV
LKRIALAGYDSDQFLAPGDAYAKLPQCCQYERTNMAAPIKKSEMDMGKMDHSQHTAAVPADAQENSPFKAIFDSYFDVKD
ALVKTDAKTAALKSKELLTAINAIKMENLKPKEHTAWMNAMKSLASDATNISENQDVKKQRESFKSLSKNTYDLIKTADQ
PQPVYYNHCPMVDANWLSKESGIKNPYYGSQMLSCGSTIETIK
>Mature_283_residues
MKSIQKGLMAITLLLSVIVFGAPIKNAKNINAKIYGNCLMCKTAIEKAGNIKNIASVNWNENTKIAAITYDEKKTNQDEV
LKRIALAGYDSDQFLAPGDAYAKLPQCCQYERTNMAAPIKKSEMDMGKMDHSQHTAAVPADAQENSPFKAIFDSYFDVKD
ALVKTDAKTAALKSKELLTAINAIKMENLKPKEHTAWMNAMKSLASDATNISENQDVKKQRESFKSLSKNTYDLIKTADQ
PQPVYYNHCPMVDANWLSKESGIKNPYYGSQMLSCGSTIETIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31382; Mature: 31382

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIQKGLMAITLLLSVIVFGAPIKNAKNINAKIYGNCLMCKTAIEKAGNIKNIASVNWN
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCEEECCCC
ENTKIAAITYDEKKTNQDEVLKRIALAGYDSDQFLAPGDAYAKLPQCCQYERTNMAAPIK
CCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
KSEMDMGKMDHSQHTAAVPADAQENSPFKAIFDSYFDVKDALVKTDAKTAALKSKELLTA
HHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
INAIKMENLKPKEHTAWMNAMKSLASDATNISENQDVKKQRESFKSLSKNTYDLIKTADQ
HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCC
PQPVYYNHCPMVDANWLSKESGIKNPYYGSQMLSCGSTIETIK
CCCEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHCCCHHHHCC
>Mature Secondary Structure
MKSIQKGLMAITLLLSVIVFGAPIKNAKNINAKIYGNCLMCKTAIEKAGNIKNIASVNWN
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCEEECCCC
ENTKIAAITYDEKKTNQDEVLKRIALAGYDSDQFLAPGDAYAKLPQCCQYERTNMAAPIK
CCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
KSEMDMGKMDHSQHTAAVPADAQENSPFKAIFDSYFDVKDALVKTDAKTAALKSKELLTA
HHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
INAIKMENLKPKEHTAWMNAMKSLASDATNISENQDVKKQRESFKSLSKNTYDLIKTADQ
HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCC
PQPVYYNHCPMVDANWLSKESGIKNPYYGSQMLSCGSTIETIK
CCCEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA