Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300787

Identifier: 146300787

GI number: 146300787

Start: 3597020

End: 3598531

Strand: Reverse

Name: 146300787

Synonym: Fjoh_3038

Alternate gene names: NA

Gene position: 3598531-3597020 (Counterclockwise)

Preceding gene: 146300789

Following gene: 146300783

Centisome position: 59.02

GC content: 36.9

Gene sequence:

>1512_bases
ATGAAAATATCAGATTCTTTTAAAAGTGCAATAGTTGAAGCCATCTGCCTGCTTTATATACTTCTTTTCGTCTATGCTTC
TGTAAGCAAAATTATTGATTTTGAGAATTTTCAGGTGCAGCTTGGACAATCTCCCCTTCTTAGTGCATTTGCTGTTCCTG
TTTCCTGGGGAGTTATTATAAGTGAATTAGGAATTGCTCTAATGCTGGTTTTTCCTGGAAGCAGGAAAATCGGGCTTTAC
GCAGGTTTCTGTCTGATGACGATGTTCAGTGCATATATTTTTATAATTCTTAATTACAGTTCTTTTGTGCCATGTTCCTG
TGGCGGGATTTTGGAAAAAATGAGCTGGGGGACGCATTTGGCATTCAATATCGTTTTTGTTCTGCTTGCCGCCTTGGCTA
TTACAGTATATCCCGACCATAACAGGTTGTTTTCAAAAATTTCCAATTCAGTAATTCTTTCTTTGATCTTTATTTCAGGA
AGTGGTGCAGTAGCAGTTCTGTTTCTTGCTTCTGAAAAAATTATGCATTATCAGAACCCGTTTATAAGACGCTACCCGCA
TCATCCTGTTTCAATAGAAAAAACCATAGATTTAAAATACAACTCCTATTATTTCGCAGGCTACGGAGAGGGAAATCTGT
ATCTCGGAAATTCAACGGCACCTTTCAGCCTTCTTTCCATTAGTAGCCAGATGGAACAGAAGAAAATAAGAATAAGGCTA
GACAGGGAACGTTTTGACTTCAAATCGGTCAGAATAGCAGTCCGCCCTCCATTCTTTTATGTTTTGGACGGGGTTGTCCC
TGTCATATTCCAGGGTAAAACATCTGAGTGGAAAGCCCTGCAATTGGCCACCACCCCTCCGTATTTTAACATTGCATATC
CTGCCGACAGTACTTTGGTTGTTTTTAGGGGAATGAGTTCAAAAACGCGGAATAATGTCATAGGAACTTACCGATGGGGA
AAAAACAGTAGAACAATAATAAGTCCTCATTTGCTCCAGAAGCAAATCGACGGAATTTTTGATACGGACGGCATGCTGCA
TTTCAGTCAAGAGTTGAATAGCATTATATACTTGTACTCATATAGAAATGAATATTTAGTAGCAGATAGGGAAGGAAAAT
TAAACTTTAGAAGTCATACTATCGACACCAATTCGCATGCCAAAATAAAAGTTGCTTATTTAAAAGGAAAATCAGAACGA
GTAATGTCTGCTCCAGCAATTACAGTAAACAGATCAAGCAGTGTAAATGAAACTTTTCTATATGTAAACTCAAATGTCCC
AGGCAGATTTGAAGGAAGACAAAAATGGGAATTGCAGTCTGTTATTGACGTCTACGATTTAAAAAAAAGGTCTTACGTAT
TTAGTTTTACAATTGATCGCTTGAATGGTAAAAAGCTTCGCAACTTTTATGTTGTTCATGGTAAAATCTTTGTTTTAATA
GGTACAAAACTAGCTATCTATAAATTTAGTAATGAAGTAAACAAAAAATATTTAAAAGCTCCTGAAGCTTAA

Upstream 100 bases:

>100_bases
TTTGGCACTTTGAAATTATACTGCAAACTAAATCGTTTTCCATCGGCAGAAAAACTGTCTATTGACGAAATTAATGATGT
AGTAGAAAAAAATATAGGAC

Downstream 100 bases:

>100_bases
TTAAAAATATACTTGCGCATGTATCAGGAATTAGATCGAAAACCTGTAAAAAAAAGTAGATCATTTAACTTTTTAAAAAA
TAATACGTTATGAAAACCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MKISDSFKSAIVEAICLLYILLFVYASVSKIIDFENFQVQLGQSPLLSAFAVPVSWGVIISELGIALMLVFPGSRKIGLY
AGFCLMTMFSAYIFIILNYSSFVPCSCGGILEKMSWGTHLAFNIVFVLLAALAITVYPDHNRLFSKISNSVILSLIFISG
SGAVAVLFLASEKIMHYQNPFIRRYPHHPVSIEKTIDLKYNSYYFAGYGEGNLYLGNSTAPFSLLSISSQMEQKKIRIRL
DRERFDFKSVRIAVRPPFFYVLDGVVPVIFQGKTSEWKALQLATTPPYFNIAYPADSTLVVFRGMSSKTRNNVIGTYRWG
KNSRTIISPHLLQKQIDGIFDTDGMLHFSQELNSIIYLYSYRNEYLVADREGKLNFRSHTIDTNSHAKIKVAYLKGKSER
VMSAPAITVNRSSSVNETFLYVNSNVPGRFEGRQKWELQSVIDVYDLKKRSYVFSFTIDRLNGKKLRNFYVVHGKIFVLI
GTKLAIYKFSNEVNKKYLKAPEA

Sequences:

>Translated_503_residues
MKISDSFKSAIVEAICLLYILLFVYASVSKIIDFENFQVQLGQSPLLSAFAVPVSWGVIISELGIALMLVFPGSRKIGLY
AGFCLMTMFSAYIFIILNYSSFVPCSCGGILEKMSWGTHLAFNIVFVLLAALAITVYPDHNRLFSKISNSVILSLIFISG
SGAVAVLFLASEKIMHYQNPFIRRYPHHPVSIEKTIDLKYNSYYFAGYGEGNLYLGNSTAPFSLLSISSQMEQKKIRIRL
DRERFDFKSVRIAVRPPFFYVLDGVVPVIFQGKTSEWKALQLATTPPYFNIAYPADSTLVVFRGMSSKTRNNVIGTYRWG
KNSRTIISPHLLQKQIDGIFDTDGMLHFSQELNSIIYLYSYRNEYLVADREGKLNFRSHTIDTNSHAKIKVAYLKGKSER
VMSAPAITVNRSSSVNETFLYVNSNVPGRFEGRQKWELQSVIDVYDLKKRSYVFSFTIDRLNGKKLRNFYVVHGKIFVLI
GTKLAIYKFSNEVNKKYLKAPEA
>Mature_503_residues
MKISDSFKSAIVEAICLLYILLFVYASVSKIIDFENFQVQLGQSPLLSAFAVPVSWGVIISELGIALMLVFPGSRKIGLY
AGFCLMTMFSAYIFIILNYSSFVPCSCGGILEKMSWGTHLAFNIVFVLLAALAITVYPDHNRLFSKISNSVILSLIFISG
SGAVAVLFLASEKIMHYQNPFIRRYPHHPVSIEKTIDLKYNSYYFAGYGEGNLYLGNSTAPFSLLSISSQMEQKKIRIRL
DRERFDFKSVRIAVRPPFFYVLDGVVPVIFQGKTSEWKALQLATTPPYFNIAYPADSTLVVFRGMSSKTRNNVIGTYRWG
KNSRTIISPHLLQKQIDGIFDTDGMLHFSQELNSIIYLYSYRNEYLVADREGKLNFRSHTIDTNSHAKIKVAYLKGKSER
VMSAPAITVNRSSSVNETFLYVNSNVPGRFEGRQKWELQSVIDVYDLKKRSYVFSFTIDRLNGKKLRNFYVVHGKIFVLI
GTKLAIYKFSNEVNKKYLKAPEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57054; Mature: 57054

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISDSFKSAIVEAICLLYILLFVYASVSKIIDFENFQVQLGQSPLLSAFAVPVSWGVII
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHH
SELGIALMLVFPGSRKIGLYAGFCLMTMFSAYIFIILNYSSFVPCSCGGILEKMSWGTHL
HHCCEEEEEEECCCCEEHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHCCCCHH
AFNIVFVLLAALAITVYPDHNRLFSKISNSVILSLIFISGSGAVAVLFLASEKIMHYQNP
HHHHHHHHHHHHHEEEECCHHHHHHHHCCCEEEEEEEEECCCCEEEEEEECHHHHHHCCC
FIRRYPHHPVSIEKTIDLKYNSYYFAGYGEGNLYLGNSTAPFSLLSISSQMEQKKIRIRL
HHHCCCCCCCEEEEEEEEEECCEEEEEECCCEEEECCCCCCCCEEHHHHHHHCCEEEEEE
DRERFDFKSVRIAVRPPFFYVLDGVVPVIFQGKTSEWKALQLATTPPYFNIAYPADSTLV
CCCCCCEEEEEEEECCCHHEECCCCEEEEECCCCCCCEEEEEEECCCEEEEECCCCCEEE
VFRGMSSKTRNNVIGTYRWGKNSRTIISPHLLQKQIDGIFDTDGMLHFSQELNSIIYLYS
EEECCCCCCCCCEEEEEEECCCCCEEECHHHHHHHHCCCCCCCCCEEEHHHCCCEEEEEE
YRNEYLVADREGKLNFRSHTIDTNSHAKIKVAYLKGKSERVMSAPAITVNRSSSVNETFL
ECCCEEEEECCCCEEEEEEEECCCCCCEEEEEEEECCCCCEEECCEEEEECCCCCCEEEE
YVNSNVPGRFEGRQKWELQSVIDVYDLKKRSYVFSFTIDRLNGKKLRNFYVVHGKIFVLI
EEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEEEEEEEEEEE
GTKLAIYKFSNEVNKKYLKAPEA
ECEEEEEEECCHHHHHHHCCCCC
>Mature Secondary Structure
MKISDSFKSAIVEAICLLYILLFVYASVSKIIDFENFQVQLGQSPLLSAFAVPVSWGVII
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHH
SELGIALMLVFPGSRKIGLYAGFCLMTMFSAYIFIILNYSSFVPCSCGGILEKMSWGTHL
HHCCEEEEEEECCCCEEHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHCCCCHH
AFNIVFVLLAALAITVYPDHNRLFSKISNSVILSLIFISGSGAVAVLFLASEKIMHYQNP
HHHHHHHHHHHHHEEEECCHHHHHHHHCCCEEEEEEEEECCCCEEEEEEECHHHHHHCCC
FIRRYPHHPVSIEKTIDLKYNSYYFAGYGEGNLYLGNSTAPFSLLSISSQMEQKKIRIRL
HHHCCCCCCCEEEEEEEEEECCEEEEEECCCEEEECCCCCCCCEEHHHHHHHCCEEEEEE
DRERFDFKSVRIAVRPPFFYVLDGVVPVIFQGKTSEWKALQLATTPPYFNIAYPADSTLV
CCCCCCEEEEEEEECCCHHEECCCCEEEEECCCCCCCEEEEEEECCCEEEEECCCCCEEE
VFRGMSSKTRNNVIGTYRWGKNSRTIISPHLLQKQIDGIFDTDGMLHFSQELNSIIYLYS
EEECCCCCCCCCEEEEEEECCCCCEEECHHHHHHHHCCCCCCCCCEEEHHHCCCEEEEEE
YRNEYLVADREGKLNFRSHTIDTNSHAKIKVAYLKGKSERVMSAPAITVNRSSSVNETFL
ECCCEEEEECCCCEEEEEEEECCCCCCEEEEEEEECCCCCEEECCEEEEECCCCCCEEEE
YVNSNVPGRFEGRQKWELQSVIDVYDLKKRSYVFSFTIDRLNGKKLRNFYVVHGKIFVLI
EEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEEEEEEEEEEE
GTKLAIYKFSNEVNKKYLKAPEA
ECEEEEEEECCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA