| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146300763
Identifier: 146300763
GI number: 146300763
Start: 3566329
End: 3566961
Strand: Reverse
Name: 146300763
Synonym: Fjoh_3014
Alternate gene names: NA
Gene position: 3566961-3566329 (Counterclockwise)
Preceding gene: 146300764
Following gene: 146300762
Centisome position: 58.5
GC content: 44.08
Gene sequence:
>633_bases ATGGAAACATTAATCGTTATATGCCTGCTGATAATCATAGTGCTGCTTGCGCATGATAAATTTCCAGCAAGAGTATCGAA TCCAGAAAAAAAAACGGGAAATGTAAAACGCAGTGGAAAAGTGCCTAATATAATCGGACTGCCCAAGGGTTTCAAAAGCC TCCTAGCGCCACAGGAAGCCAATGACTGCCATCTCAAGGCAGCTGGAGATGAAGTGCATAATTTTGATGAAGAAATCAGT AGCGAACAACGCACAACAGATTGGCAGGATGAACGCGATGATGCAAATGAATATTTGCCTGATTTTGAGCAGGAGGAGGA AGAGTGGAACAATTTTGGAATTTCCAATGGGAATAGCGGTTTTGCCCAAGGGGTTACCTTCGAAGAATTAAGCTCAGTGG GGATGATGCTGCAGGTGGAAGACCTGGAGCCATCCCAAAAGGAAACAGCAGCAGCGTTGATTCAGAAAATACAAGGAACC GAATTATTCGACCTACTGGAGAATTCCATGGAAGGAGCGTCCCGGAAAATGGCAGAGCTGTTGGAAGGGAGGCTCTCTTC TTTAAATGTAAATCCCTCGACAACTGGAGGGAAAAATGATGACAGCGATTTTGATATCCTCGACTTTATGTAA
Upstream 100 bases:
>100_bases ATATACGGGTACTTGGACAATCTGCTTGAGTATCATTTTCAGGAATTCGGCGATCAGATCATCGCTAGTTTTAATGAGAA GTATAAACCAATAATGTAGT
Downstream 100 bases:
>100_bases AAGAGATATGATTCAGTAAAAATCTATTATTTATTGTTTACAAATAAGTACTGTTCTTGTTATATTTTGTTACTTTGTAG CAAACAATATTAAAATTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues METLIVICLLIIIVLLAHDKFPARVSNPEKKTGNVKRSGKVPNIIGLPKGFKSLLAPQEANDCHLKAAGDEVHNFDEEIS SEQRTTDWQDERDDANEYLPDFEQEEEEWNNFGISNGNSGFAQGVTFEELSSVGMMLQVEDLEPSQKETAAALIQKIQGT ELFDLLENSMEGASRKMAELLEGRLSSLNVNPSTTGGKNDDSDFDILDFM
Sequences:
>Translated_210_residues METLIVICLLIIIVLLAHDKFPARVSNPEKKTGNVKRSGKVPNIIGLPKGFKSLLAPQEANDCHLKAAGDEVHNFDEEIS SEQRTTDWQDERDDANEYLPDFEQEEEEWNNFGISNGNSGFAQGVTFEELSSVGMMLQVEDLEPSQKETAAALIQKIQGT ELFDLLENSMEGASRKMAELLEGRLSSLNVNPSTTGGKNDDSDFDILDFM >Mature_210_residues METLIVICLLIIIVLLAHDKFPARVSNPEKKTGNVKRSGKVPNIIGLPKGFKSLLAPQEANDCHLKAAGDEVHNFDEEIS SEQRTTDWQDERDDANEYLPDFEQEEEEWNNFGISNGNSGFAQGVTFEELSSVGMMLQVEDLEPSQKETAAALIQKIQGT ELFDLLENSMEGASRKMAELLEGRLSSLNVNPSTTGGKNDDSDFDILDFM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23295; Mature: 23295
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METLIVICLLIIIVLLAHDKFPARVSNPEKKTGNVKRSGKVPNIIGLPKGFKSLLAPQEA CHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCC NDCHLKAAGDEVHNFDEEISSEQRTTDWQDERDDANEYLPDFEQEEEEWNNFGISNGNSG CCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCC FAQGVTFEELSSVGMMLQVEDLEPSQKETAAALIQKIQGTELFDLLENSMEGASRKMAEL CCCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LEGRLSSLNVNPSTTGGKNDDSDFDILDFM HHHHHHHCCCCCCCCCCCCCCCCCCHHCCC >Mature Secondary Structure METLIVICLLIIIVLLAHDKFPARVSNPEKKTGNVKRSGKVPNIIGLPKGFKSLLAPQEA CHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCC NDCHLKAAGDEVHNFDEEISSEQRTTDWQDERDDANEYLPDFEQEEEEWNNFGISNGNSG CCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCC FAQGVTFEELSSVGMMLQVEDLEPSQKETAAALIQKIQGTELFDLLENSMEGASRKMAEL CCCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LEGRLSSLNVNPSTTGGKNDDSDFDILDFM HHHHHHHCCCCCCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA