| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300762
Identifier: 146300762
GI number: 146300762
Start: 3565330
End: 3566226
Strand: Reverse
Name: 146300762
Synonym: Fjoh_3013
Alternate gene names: NA
Gene position: 3566226-3565330 (Counterclockwise)
Preceding gene: 146300763
Following gene: 146300761
Centisome position: 58.49
GC content: 32.22
Gene sequence:
>897_bases ATGTCAGAATTATTGACTAGTCCATACAATAAACTTACCTTATCTGGTCATGAAACTTTTCACTGCAGGCAATTGTGGTT AAAGAAAGGTTATGATTTTGTAAATAACGGGAACAAATTTACCGACGTTGAAGCAGTAGTTTTACTTGGTGTAGGTAAGA ATATGGTTGCTTCAATATATTTTTGGATGAAGGCATTTTCGTTGATTGATGGAGAAGGTAAACTTACAAGTTTGGCACAT TATATTTTTTCTTCAGAAGGCAAAGATCCTTTTCTAGAAGATGAAGCGACCTTGTGGCTTCTTCATTATCATTTGGTGAA TCAGGGTTTTTCCTCGATCTATGATTTGATTTTTAATTATCTGCGAAGAGAGAAAATAGAGTTTACAAAAGAAAACTTTT TATTATTTGTACAAAGAAAGGCAAATGAAATAGGTTTTACTCAATTTAATAAGAAGACTGCTGGGACAGATTTTGATGTA TTAACGAAAATGTATATCAGAACAACCGATCAAGTGAAGGATAAGGAAGACACTTTTTCAGGATTATTGGCAGACCTAAA TCTAATACAGGAAGAAAAAAAACAAACATCATTATATTCCATCCCGAATGAGAGTAGAAACAATCTGCCTGAGGAAATTA TCCTATATACAATTTTGGATAAACAGGATTTTCAAAACTCGGTAAGTTTAAATATGCTTTTTCAGGACAGGAATCAGGCT GGATCTGTTTTTGGCATAACCAAAAATGCATTGATGGAAAAATTGGAATCTTTAGCTAATAATCCAAAATATAAAAAATA CGGTGTGACGTTAAGTGATCATGCCGGCATTAAGGAACTACAGTTTGTTTCAAAACCTGATAAATTTGAAATACTAAATC ATTATTATGGCAATTAA
Upstream 100 bases:
>100_bases GAGATATGATTCAGTAAAAATCTATTATTTATTGTTTACAAATAAGTACTGTTCTTGTTATATTTTGTTACTTTGTAGCA AACAATATTAAAATTAAGCG
Downstream 100 bases:
>100_bases ATTCAGTACATCCACTAATATCATTCGTGATACGGATAGGGAATTGACTTATATTCCTACTCCTAATGCTATTAGGATAA GTAACCAGATAAGTAATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MSELLTSPYNKLTLSGHETFHCRQLWLKKGYDFVNNGNKFTDVEAVVLLGVGKNMVASIYFWMKAFSLIDGEGKLTSLAH YIFSSEGKDPFLEDEATLWLLHYHLVNQGFSSIYDLIFNYLRREKIEFTKENFLLFVQRKANEIGFTQFNKKTAGTDFDV LTKMYIRTTDQVKDKEDTFSGLLADLNLIQEEKKQTSLYSIPNESRNNLPEEIILYTILDKQDFQNSVSLNMLFQDRNQA GSVFGITKNALMEKLESLANNPKYKKYGVTLSDHAGIKELQFVSKPDKFEILNHYYGN
Sequences:
>Translated_298_residues MSELLTSPYNKLTLSGHETFHCRQLWLKKGYDFVNNGNKFTDVEAVVLLGVGKNMVASIYFWMKAFSLIDGEGKLTSLAH YIFSSEGKDPFLEDEATLWLLHYHLVNQGFSSIYDLIFNYLRREKIEFTKENFLLFVQRKANEIGFTQFNKKTAGTDFDV LTKMYIRTTDQVKDKEDTFSGLLADLNLIQEEKKQTSLYSIPNESRNNLPEEIILYTILDKQDFQNSVSLNMLFQDRNQA GSVFGITKNALMEKLESLANNPKYKKYGVTLSDHAGIKELQFVSKPDKFEILNHYYGN >Mature_297_residues SELLTSPYNKLTLSGHETFHCRQLWLKKGYDFVNNGNKFTDVEAVVLLGVGKNMVASIYFWMKAFSLIDGEGKLTSLAHY IFSSEGKDPFLEDEATLWLLHYHLVNQGFSSIYDLIFNYLRREKIEFTKENFLLFVQRKANEIGFTQFNKKTAGTDFDVL TKMYIRTTDQVKDKEDTFSGLLADLNLIQEEKKQTSLYSIPNESRNNLPEEIILYTILDKQDFQNSVSLNMLFQDRNQAG SVFGITKNALMEKLESLANNPKYKKYGVTLSDHAGIKELQFVSKPDKFEILNHYYGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34425; Mature: 34293
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELLTSPYNKLTLSGHETFHCRQLWLKKGYDFVNNGNKFTDVEAVVLLGVGKNMVASIY CCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHCCCCCEEHHEEEEEEECCHHHHHHHH FWMKAFSLIDGEGKLTSLAHYIFSSEGKDPFLEDEATLWLLHYHLVNQGFSSIYDLIFNY HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LRREKIEFTKENFLLFVQRKANEIGFTQFNKKTAGTDFDVLTKMYIRTTDQVKDKEDTFS HHHHHHHCCCCCEEEEEEECCCCCCCHHCCCCCCCCCHHHHHHHHHHCCHHHCCHHHHHH GLLADLNLIQEEKKQTSLYSIPNESRNNLPEEIILYTILDKQDFQNSVSLNMLFQDRNQA HHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHEEEEEEECCHHCCCCCEEEEEEECCCCC GSVFGITKNALMEKLESLANNPKYKKYGVTLSDHAGIKELQFVSKPDKFEILNHYYGN CCEEECHHHHHHHHHHHHHCCCCCEEECCEECCCCCHHHHHHCCCCCHHHHHHHHCCC >Mature Secondary Structure SELLTSPYNKLTLSGHETFHCRQLWLKKGYDFVNNGNKFTDVEAVVLLGVGKNMVASIY CCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHCCCCCEEHHEEEEEEECCHHHHHHHH FWMKAFSLIDGEGKLTSLAHYIFSSEGKDPFLEDEATLWLLHYHLVNQGFSSIYDLIFNY HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LRREKIEFTKENFLLFVQRKANEIGFTQFNKKTAGTDFDVLTKMYIRTTDQVKDKEDTFS HHHHHHHCCCCCEEEEEEECCCCCCCHHCCCCCCCCCHHHHHHHHHHCCHHHCCHHHHHH GLLADLNLIQEEKKQTSLYSIPNESRNNLPEEIILYTILDKQDFQNSVSLNMLFQDRNQA HHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHEEEEEEECCHHCCCCCEEEEEEECCCCC GSVFGITKNALMEKLESLANNPKYKKYGVTLSDHAGIKELQFVSKPDKFEILNHYYGN CCEEECHHHHHHHHHHHHHCCCCCEEECCEECCCCCHHHHHHCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA