| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300742
Identifier: 146300742
GI number: 146300742
Start: 3540761
End: 3541234
Strand: Direct
Name: 146300742
Synonym: Fjoh_2993
Alternate gene names: NA
Gene position: 3540761-3541234 (Clockwise)
Preceding gene: 146300741
Following gene: 146300743
Centisome position: 58.08
GC content: 38.19
Gene sequence:
>474_bases ATGAGATATTTAACATCTATATTAATATTTCTTTTTCTTTTGGCTTGTAATCAAAAACAAGAAGCTGTTCAGGGACAGTG GATAAAAGGAAACGAGCAGAAGAAACTTGAAACGATAGAAAATCAATTTCGTGGTTTTGACATGGCAATGGTGGAAACGG GCTATCGCTACCAGGAATTGTATTGGGCGGGACAGGACGAAAACTGGGAGTATGCCGATTATCAACTCGAAAAAATCCAA AAGGCGATAGAAAATGGATTGGAAAGAAGACCTAAACGGGCACCTTCCGCACATCATTTTTTAACTGTTACACTCCCTCA AATGAGTGAGGCACTAAAAAAAAGGGATACAGTTGTTTTTAATAAGAACTTCCAAATGCTTACCAATAGCTGCGTTAGCT GTCATGCAATGGAAAAAGTACCTTTCTTCACTGTAAAAACGCCGACAGAAAGACAATCACCCATCAGAAAATAA
Upstream 100 bases:
>100_bases AAACCTTCCGAAATACCTAAAATACACTACGTTATTTTCAAATATACCGTTCTAAATGATTTGTATTGTACGAAATTTGT GTAATGTAAAGTTGTAAACA
Downstream 100 bases:
>100_bases TGCTTGAACACATTAAACAGATAGATACAAATATTCTATTATGGCTAAATGGAAGCCATAATGAATTTTGGGACAATATA ATGTGGTTTGCCAGCGGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MRYLTSILIFLFLLACNQKQEAVQGQWIKGNEQKKLETIENQFRGFDMAMVETGYRYQELYWAGQDENWEYADYQLEKIQ KAIENGLERRPKRAPSAHHFLTVTLPQMSEALKKRDTVVFNKNFQMLTNSCVSCHAMEKVPFFTVKTPTERQSPIRK
Sequences:
>Translated_157_residues MRYLTSILIFLFLLACNQKQEAVQGQWIKGNEQKKLETIENQFRGFDMAMVETGYRYQELYWAGQDENWEYADYQLEKIQ KAIENGLERRPKRAPSAHHFLTVTLPQMSEALKKRDTVVFNKNFQMLTNSCVSCHAMEKVPFFTVKTPTERQSPIRK >Mature_157_residues MRYLTSILIFLFLLACNQKQEAVQGQWIKGNEQKKLETIENQFRGFDMAMVETGYRYQELYWAGQDENWEYADYQLEKIQ KAIENGLERRPKRAPSAHHFLTVTLPQMSEALKKRDTVVFNKNFQMLTNSCVSCHAMEKVPFFTVKTPTERQSPIRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18533; Mature: 18533
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYLTSILIFLFLLACNQKQEAVQGQWIKGNEQKKLETIENQFRGFDMAMVETGYRYQEL CHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCEEEE YWAGQDENWEYADYQLEKIQKAIENGLERRPKRAPSAHHFLTVTLPQMSEALKKRDTVVF EECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHCCEEE NKNFQMLTNSCVSCHAMEKVPFFTVKTPTERQSPIRK CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC >Mature Secondary Structure MRYLTSILIFLFLLACNQKQEAVQGQWIKGNEQKKLETIENQFRGFDMAMVETGYRYQEL CHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCEEEE YWAGQDENWEYADYQLEKIQKAIENGLERRPKRAPSAHHFLTVTLPQMSEALKKRDTVVF EECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHCCEEE NKNFQMLTNSCVSCHAMEKVPFFTVKTPTERQSPIRK CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA