| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300696
Identifier: 146300696
GI number: 146300696
Start: 3492891
End: 3493871
Strand: Reverse
Name: 146300696
Synonym: Fjoh_2947
Alternate gene names: NA
Gene position: 3493871-3492891 (Counterclockwise)
Preceding gene: 146300697
Following gene: 146300693
Centisome position: 57.31
GC content: 28.64
Gene sequence:
>981_bases ATGAATACTCAAAAACCTATTTTAGTAATTGTAGTTGAAGGTGAAAAATTTTTTAATTTTTTTAAAAATGAAGTTGAAAA AATCTGGCCTTCGCATTCCATATATTTTTTAGAAAATTATTCTGGACAGGTTTTATATAAGTTTAATTATCCTGCTAATA CTGATCTTTTAGACTTTCCTTATATTACTGAACCTTCATGGAAAAATTATAAAGAAGATATTGGATATGTATGGCATCTT GAAAATATGGAAGTTGTAAAAACAGATTACAGCAATACAGCGATTCTTAAATCAGCAGAAAAGATTATTTTCATGTCTCC ATATTTGTGTCAAGTTGATGCAATTGCATTTGAAATACTTATAAACCAAACTCTTGGTAAAGCAGATAAACCTTGTTTAT ATTGCAGTGCTGAAAGTTTTGATAGAGAAAAAATTAAGCTTTCTATGAAAAATCCGGTCGCTGTAACTGATGATTTTTTT CAGGATAGTGTAAGATTTTATACTGCCAAACGCTTTTTTGAATATAATTTTAATTTTAACTCTTGTGTTCTATTTAAACC AGCTTTACAAAAAGCCGGCATTTTGAATAGTGATTTTGTTTTTACCAAATATGTTTTTCAGATTTTCTACGCACTAAAAA ATAAATCTGATTTCAGCTTCGATGATATGTTTGATATGATATACTATTGGAAAGGTACAGGTTTATATCCAGAAGCCTCA AGTTTTTATTCAGATACTATAGTTCAAAACTTAATTGACGCCGGATTAATAGAAGATAATGGAAATGGTACAGAAGATAA CAAACATTATGATTTTACTGAAAAAGGAAAAGCTTTATTTAAGTTTATTAATCCAGAATGCTGGGATATAGATATGCTGG GAAAATTAATAGTATGGCAGCAAAACTGGCCGGAATGTAAAAGAGAGATGGAAGATTATTTAGTGCAATTTTTTAGAAAG CAAATGGAATTTAATGGGTAA
Upstream 100 bases:
>100_bases GGGAATGTACCCTATTTTATCCAATAGGTTTAATATAAAGAAGGAAAAAACTTATATTTTGTTTACTTTTGCAAAGTATT AAACCAATGTAAGTTTATCA
Downstream 100 bases:
>100_bases CAGAATAATGGCCTTGGCTATTCTTAAAAGTAAAGTTCCGTTCATAATTATGATTTTTGGTTTATAAAAAAAGCACATAT TAAAATTAATTAATATGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MNTQKPILVIVVEGEKFFNFFKNEVEKIWPSHSIYFLENYSGQVLYKFNYPANTDLLDFPYITEPSWKNYKEDIGYVWHL ENMEVVKTDYSNTAILKSAEKIIFMSPYLCQVDAIAFEILINQTLGKADKPCLYCSAESFDREKIKLSMKNPVAVTDDFF QDSVRFYTAKRFFEYNFNFNSCVLFKPALQKAGILNSDFVFTKYVFQIFYALKNKSDFSFDDMFDMIYYWKGTGLYPEAS SFYSDTIVQNLIDAGLIEDNGNGTEDNKHYDFTEKGKALFKFINPECWDIDMLGKLIVWQQNWPECKREMEDYLVQFFRK QMEFNG
Sequences:
>Translated_326_residues MNTQKPILVIVVEGEKFFNFFKNEVEKIWPSHSIYFLENYSGQVLYKFNYPANTDLLDFPYITEPSWKNYKEDIGYVWHL ENMEVVKTDYSNTAILKSAEKIIFMSPYLCQVDAIAFEILINQTLGKADKPCLYCSAESFDREKIKLSMKNPVAVTDDFF QDSVRFYTAKRFFEYNFNFNSCVLFKPALQKAGILNSDFVFTKYVFQIFYALKNKSDFSFDDMFDMIYYWKGTGLYPEAS SFYSDTIVQNLIDAGLIEDNGNGTEDNKHYDFTEKGKALFKFINPECWDIDMLGKLIVWQQNWPECKREMEDYLVQFFRK QMEFNG >Mature_326_residues MNTQKPILVIVVEGEKFFNFFKNEVEKIWPSHSIYFLENYSGQVLYKFNYPANTDLLDFPYITEPSWKNYKEDIGYVWHL ENMEVVKTDYSNTAILKSAEKIIFMSPYLCQVDAIAFEILINQTLGKADKPCLYCSAESFDREKIKLSMKNPVAVTDDFF QDSVRFYTAKRFFEYNFNFNSCVLFKPALQKAGILNSDFVFTKYVFQIFYALKNKSDFSFDDMFDMIYYWKGTGLYPEAS SFYSDTIVQNLIDAGLIEDNGNGTEDNKHYDFTEKGKALFKFINPECWDIDMLGKLIVWQQNWPECKREMEDYLVQFFRK QMEFNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38514; Mature: 38514
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTQKPILVIVVEGEKFFNFFKNEVEKIWPSHSIYFLENYSGQVLYKFNYPANTDLLDFP CCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCCCC YITEPSWKNYKEDIGYVWHLENMEVVKTDYSNTAILKSAEKIIFMSPYLCQVDAIAFEIL CCCCCCCCCHHHCCCEEEEECCCEEEEECCCCHHHHHCCCEEEEECCCHHHHHHHHHHHH INQTLGKADKPCLYCSAESFDREKIKLSMKNPVAVTDDFFQDSVRFYTAKRFFEYNFNFN HHHHCCCCCCCEEEECCCCCCCEEEEEEECCCEEECHHHHHHHHHHHEEEEEEEECCCCC SCVLFKPALQKAGILNSDFVFTKYVFQIFYALKNKSDFSFDDMFDMIYYWKGTGLYPEAS EEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEECCCCCCCCCH SFYSDTIVQNLIDAGLIEDNGNGTEDNKHYDFTEKGKALFKFINPECWDIDMLGKLIVWQ HHHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCEEEEC QNWPECKREMEDYLVQFFRKQMEFNG CCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNTQKPILVIVVEGEKFFNFFKNEVEKIWPSHSIYFLENYSGQVLYKFNYPANTDLLDFP CCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCCCC YITEPSWKNYKEDIGYVWHLENMEVVKTDYSNTAILKSAEKIIFMSPYLCQVDAIAFEIL CCCCCCCCCHHHCCCEEEEECCCEEEEECCCCHHHHHCCCEEEEECCCHHHHHHHHHHHH INQTLGKADKPCLYCSAESFDREKIKLSMKNPVAVTDDFFQDSVRFYTAKRFFEYNFNFN HHHHCCCCCCCEEEECCCCCCCEEEEEEECCCEEECHHHHHHHHHHHEEEEEEEECCCCC SCVLFKPALQKAGILNSDFVFTKYVFQIFYALKNKSDFSFDDMFDMIYYWKGTGLYPEAS EEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEECCCCCCCCCH SFYSDTIVQNLIDAGLIEDNGNGTEDNKHYDFTEKGKALFKFINPECWDIDMLGKLIVWQ HHHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCEEEEC QNWPECKREMEDYLVQFFRKQMEFNG CCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA