| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is ywfO [H]
Identifier: 146300654
GI number: 146300654
Start: 3447391
End: 3448620
Strand: Reverse
Name: ywfO [H]
Synonym: Fjoh_2905
Alternate gene names: 146300654
Gene position: 3448620-3447391 (Counterclockwise)
Preceding gene: 146300661
Following gene: 146300653
Centisome position: 56.56
GC content: 32.44
Gene sequence:
>1230_bases GTGACTCAAATTAATAAATTAAAAATATTTAACGACCCAATTTATGGGTTTATAACTATACCGAACGAGCTCATTTACGA TTTAATCCAACATCCTTATTTTCAGCGTCTACGACGTATTTCACAAATGGGATTGTCGTATTTAGTTTATCCAGGAGCAA ATCATACACGTTTTCATCATGCTTTGGGCTGTATGCATTTAATGAAAAAGGCAATCGATACACTGCGTTTTAAAGATGTT GTTATTTCTGAAGAAGAAGAAAATGCTCTTTTAATAGCAATTTTGCTCCATGATATTGGTCATGGGCCATTTTCGCATGC AATGGAGAAAAGTATTGTTGAAGATGTACATCACGAAGCCATTTCGCTGTTGTTTATGAATCAGCTTAATGAAGAATTTG ATGGAAGATTAAGTCTGGCAATTCAGGTTTTTAAAGGAGAATATGACAGGAAATTTATGCTGCAGTTGATTTCAAGTCAA TTGGATATGGATAGAATGGATTATTTAAAAAGAGACAGTTTTTATACTGGAGTTGCCGAAGGAAATGTAAACTCAGAACG TTTGATCCAGATGATGAATGTGGTTGATGATGTTTTAGTAATTGAAGAAAAAGGAATTTATTCTGTCGAAAAATTTCTGC TTTCAAGAAGATTAATGTACTGGCAGGCGTATTTGCACAAAACTAGCTTGGTTGCCGAATTAATTTTAATGAAGGTATTG AAAAGAGCCAAAGAGCTTACTCTAAAAGGAGTTAAACTTACTTGCAGTGAACCGCTTATGTATTTCATGCAGAACAAAAT TACTTTAGAAGATTTTGATGCCGAAAAATTGGATTTGTTTTCTCAATTAGATGATTTTGATATTATAAGTGCCTTAAAAT CTTGGCAGAGACATCCGGATTTTATACTTTCAACTTTAAGTAAAATGATCATTAATCGAGATTTGTTAAAGATAAAACTT AGTGCAGATAAAATTCCGATGGAGGAATCGCAGTCTTTAAAAGAAGAGTTTGCAGAAGCGCATAATATTTCGGCTTTAGA TGCAGGTTATTTCATATTTAGAGGTAAAATTAAGAATCAGGCCTATAGTAAAGCTGCCGAACCAATACGAATTTTGAAAA AAGATAAAACAATTGAGGATGTTGTTGAAGCTTCTGATCAATTGAATTTGAAATCGTTATCTAAATTGGTGACAAAATAT TATATCTGTTTTCCAAAACAACTTATCTAA
Upstream 100 bases:
>100_bases TAAGAAAATACTGATATTAAATAACAACTTTTTAAGTTAAAAACTAAAATGTGTTTATACTTATTTACTTATATTTGTTG ACCAAAAAAATAACCAACTT
Downstream 100 bases:
>100_bases AATTAACATTTAAAATCTATTTTTTATATTTTTGTCGCGATGAAATTTACAGCAGAACAAATAGCAGGAATTTTAGAAGG AGAAGTTGTTGGGAATCCCA
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MTQINKLKIFNDPIYGFITIPNELIYDLIQHPYFQRLRRISQMGLSYLVYPGANHTRFHHALGCMHLMKKAIDTLRFKDV VISEEEENALLIAILLHDIGHGPFSHAMEKSIVEDVHHEAISLLFMNQLNEEFDGRLSLAIQVFKGEYDRKFMLQLISSQ LDMDRMDYLKRDSFYTGVAEGNVNSERLIQMMNVVDDVLVIEEKGIYSVEKFLLSRRLMYWQAYLHKTSLVAELILMKVL KRAKELTLKGVKLTCSEPLMYFMQNKITLEDFDAEKLDLFSQLDDFDIISALKSWQRHPDFILSTLSKMIINRDLLKIKL SADKIPMEESQSLKEEFAEAHNISALDAGYFIFRGKIKNQAYSKAAEPIRILKKDKTIEDVVEASDQLNLKSLSKLVTKY YICFPKQLI
Sequences:
>Translated_409_residues MTQINKLKIFNDPIYGFITIPNELIYDLIQHPYFQRLRRISQMGLSYLVYPGANHTRFHHALGCMHLMKKAIDTLRFKDV VISEEEENALLIAILLHDIGHGPFSHAMEKSIVEDVHHEAISLLFMNQLNEEFDGRLSLAIQVFKGEYDRKFMLQLISSQ LDMDRMDYLKRDSFYTGVAEGNVNSERLIQMMNVVDDVLVIEEKGIYSVEKFLLSRRLMYWQAYLHKTSLVAELILMKVL KRAKELTLKGVKLTCSEPLMYFMQNKITLEDFDAEKLDLFSQLDDFDIISALKSWQRHPDFILSTLSKMIINRDLLKIKL SADKIPMEESQSLKEEFAEAHNISALDAGYFIFRGKIKNQAYSKAAEPIRILKKDKTIEDVVEASDQLNLKSLSKLVTKY YICFPKQLI >Mature_408_residues TQINKLKIFNDPIYGFITIPNELIYDLIQHPYFQRLRRISQMGLSYLVYPGANHTRFHHALGCMHLMKKAIDTLRFKDVV ISEEEENALLIAILLHDIGHGPFSHAMEKSIVEDVHHEAISLLFMNQLNEEFDGRLSLAIQVFKGEYDRKFMLQLISSQL DMDRMDYLKRDSFYTGVAEGNVNSERLIQMMNVVDDVLVIEEKGIYSVEKFLLSRRLMYWQAYLHKTSLVAELILMKVLK RAKELTLKGVKLTCSEPLMYFMQNKITLEDFDAEKLDLFSQLDDFDIISALKSWQRHPDFILSTLSKMIINRDLLKIKLS ADKIPMEESQSLKEEFAEAHNISALDAGYFIFRGKIKNQAYSKAAEPIRILKKDKTIEDVVEASDQLNLKSLSKLVTKYY ICFPKQLI
Specific function: Unknown
COG id: COG1078
COG function: function code R; HD superfamily phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
Organism=Homo sapiens, GI38016914, Length=296, Percent_Identity=28.7162162162162, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17537827, Length=392, Percent_Identity=26.7857142857143, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17537829, Length=392, Percent_Identity=26.7857142857143, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI221512937, Length=270, Percent_Identity=25.5555555555556, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI24666702, Length=270, Percent_Identity=25.5555555555556, Blast_Score=81, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003607 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47535; Mature: 47404
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQINKLKIFNDPIYGFITIPNELIYDLIQHPYFQRLRRISQMGLSYLVYPGANHTRFHH CCCCCCEEEECCCCEEEEECCHHHHHHHHHCHHHHHHHHHHHCCCCEEEECCCCCCHHHH ALGCMHLMKKAIDTLRFKDVVISEEEENALLIAILLHDIGHGPFSHAMEKSIVEDVHHEA HHHHHHHHHHHHHHHHHHHHEECCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ISLLFMNQLNEEFDGRLSLAIQVFKGEYDRKFMLQLISSQLDMDRMDYLKRDSFYTGVAE HHHHHHHHHHHHHCCCEEEEEEEHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCC GNVNSERLIQMMNVVDDVLVIEEKGIYSVEKFLLSRRLMYWQAYLHKTSLVAELILMKVL CCCCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRAKELTLKGVKLTCSEPLMYFMQNKITLEDFDAEKLDLFSQLDDFDIISALKSWQRHPD HHHHHHHHCCEEEECCHHHHHHHHCCCEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCHH FILSTLSKMIINRDLLKIKLSADKIPMEESQSLKEEFAEAHNISALDAGYFIFRGKIKNQ HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHH AYSKAAEPIRILKKDKTIEDVVEASDQLNLKSLSKLVTKYYICFPKQLI HHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHCC >Mature Secondary Structure TQINKLKIFNDPIYGFITIPNELIYDLIQHPYFQRLRRISQMGLSYLVYPGANHTRFHH CCCCCEEEECCCCEEEEECCHHHHHHHHHCHHHHHHHHHHHCCCCEEEECCCCCCHHHH ALGCMHLMKKAIDTLRFKDVVISEEEENALLIAILLHDIGHGPFSHAMEKSIVEDVHHEA HHHHHHHHHHHHHHHHHHHHEECCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ISLLFMNQLNEEFDGRLSLAIQVFKGEYDRKFMLQLISSQLDMDRMDYLKRDSFYTGVAE HHHHHHHHHHHHHCCCEEEEEEEHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCC GNVNSERLIQMMNVVDDVLVIEEKGIYSVEKFLLSRRLMYWQAYLHKTSLVAELILMKVL CCCCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRAKELTLKGVKLTCSEPLMYFMQNKITLEDFDAEKLDLFSQLDDFDIISALKSWQRHPD HHHHHHHHCCEEEECCHHHHHHHHCCCEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCHH FILSTLSKMIINRDLLKIKLSADKIPMEESQSLKEEFAEAHNISALDAGYFIFRGKIKNQ HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHH AYSKAAEPIRILKKDKTIEDVVEASDQLNLKSLSKLVTKYYICFPKQLI HHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 7934828 [H]