| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300635
Identifier: 146300635
GI number: 146300635
Start: 3424959
End: 3425705
Strand: Reverse
Name: 146300635
Synonym: Fjoh_2886
Alternate gene names: NA
Gene position: 3425705-3424959 (Counterclockwise)
Preceding gene: 146300636
Following gene: 146300634
Centisome position: 56.19
GC content: 26.64
Gene sequence:
>747_bases ATGAAACGATTCTTTTTTTTTATCCTTATATTTCATAATGCTTTTTCTCAAGAAATTCCATTGAATGTTCAAAAATTAAT TAAAGCATATCCAGATCAAATTGTTGATTATAAGGACAATAAAATTATTTTTAGTGATAAGTCAAGCTTAATTTATGATG ATTTTAAAAATAAAACGAATCAGGAATTATTAGATAATCCTGATATTGAGGATCAATTTAAGTTTGTTTATAATAAAGCA GATAAGAATTTAATTCCAAAGGAAGATGCAGGAAGAATTCGAAATGAAGCTTTTTTTAAGAAAATCTACGGAAATTCGAA ATCAGAAGTTGAATCAAAAATGACTGAAATTATTTGGTGTCCGAAATTAGCCAATCAAAAAGTAAAAGTAACAACCGTAA ATGGAATTGATAAAATAGTAAAAAAACTCTCAGCAGAATTAGATAATAATCCAGAATTTAAAAAATACATTAATGTTATT GGAGGAACATTTAATTGGAGAAAAATTTCAGGAACAAATCGATTGAGTATGCATAGTTATGGAATGACAATAGATATTAA TGTCAAAAATTCTAATTACTGGCAATGGGATTGTAAATGCAAAAATGAAGAAGTTACGCTTTCATATAGAAATCAAATTC CCCTCAAGTTAGTTTCAATTTTTGAAAAATATGGCTTTATTTGGGGAGGAAATTGGAAACATTATGACACAATGCATTTT GAGTATCGACCTGAACTTTTGTTGTAA
Upstream 100 bases:
>100_bases AAATAATAGTTCGTTGAGTCCTTGGTACGCTGTAGATTTTGGAACCTCTCTGCAAACACCAGAATGGACTTTTAGTTCTT CACAATTAAAACGTTTTTAA
Downstream 100 bases:
>100_bases ATTTTGAAATTATTTTATTTTTAAAAGAAATACAGAGAAAAGAAGATTACGAATTTAAAAAAATATAATTATGGATTTCA GGCTGAAAGTATTTTATACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MKRFFFFILIFHNAFSQEIPLNVQKLIKAYPDQIVDYKDNKIIFSDKSSLIYDDFKNKTNQELLDNPDIEDQFKFVYNKA DKNLIPKEDAGRIRNEAFFKKIYGNSKSEVESKMTEIIWCPKLANQKVKVTTVNGIDKIVKKLSAELDNNPEFKKYINVI GGTFNWRKISGTNRLSMHSYGMTIDINVKNSNYWQWDCKCKNEEVTLSYRNQIPLKLVSIFEKYGFIWGGNWKHYDTMHF EYRPELLL
Sequences:
>Translated_248_residues MKRFFFFILIFHNAFSQEIPLNVQKLIKAYPDQIVDYKDNKIIFSDKSSLIYDDFKNKTNQELLDNPDIEDQFKFVYNKA DKNLIPKEDAGRIRNEAFFKKIYGNSKSEVESKMTEIIWCPKLANQKVKVTTVNGIDKIVKKLSAELDNNPEFKKYINVI GGTFNWRKISGTNRLSMHSYGMTIDINVKNSNYWQWDCKCKNEEVTLSYRNQIPLKLVSIFEKYGFIWGGNWKHYDTMHF EYRPELLL >Mature_248_residues MKRFFFFILIFHNAFSQEIPLNVQKLIKAYPDQIVDYKDNKIIFSDKSSLIYDDFKNKTNQELLDNPDIEDQFKFVYNKA DKNLIPKEDAGRIRNEAFFKKIYGNSKSEVESKMTEIIWCPKLANQKVKVTTVNGIDKIVKKLSAELDNNPEFKKYINVI GGTFNWRKISGTNRLSMHSYGMTIDINVKNSNYWQWDCKCKNEEVTLSYRNQIPLKLVSIFEKYGFIWGGNWKHYDTMHF EYRPELLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29407; Mature: 29407
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFFFFILIFHNAFSQEIPLNVQKLIKAYPDQIVDYKDNKIIFSDKSSLIYDDFKNKTN CCHHEEEEEHHHHHHCCCCCCCHHHHHHHCCHHHCCCCCCEEEEECCCCEEHHHHCCCCC QELLDNPDIEDQFKFVYNKADKNLIPKEDAGRIRNEAFFKKIYGNSKSEVESKMTEIIWC HHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEC PKLANQKVKVTTVNGIDKIVKKLSAELDNNPEFKKYINVIGGTFNWRKISGTNRLSMHSY CCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEEEC GMTIDINVKNSNYWQWDCKCKNEEVTLSYRNQIPLKLVSIFEKYGFIWGGNWKHYDTMHF CEEEEEEECCCCEEEEEEEECCCEEEEEECCCCCHHHHHHHHHCCCEECCCCCEECEEEE EYRPELLL ECCCCCCC >Mature Secondary Structure MKRFFFFILIFHNAFSQEIPLNVQKLIKAYPDQIVDYKDNKIIFSDKSSLIYDDFKNKTN CCHHEEEEEHHHHHHCCCCCCCHHHHHHHCCHHHCCCCCCEEEEECCCCEEHHHHCCCCC QELLDNPDIEDQFKFVYNKADKNLIPKEDAGRIRNEAFFKKIYGNSKSEVESKMTEIIWC HHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEC PKLANQKVKVTTVNGIDKIVKKLSAELDNNPEFKKYINVIGGTFNWRKISGTNRLSMHSY CCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEEEC GMTIDINVKNSNYWQWDCKCKNEEVTLSYRNQIPLKLVSIFEKYGFIWGGNWKHYDTMHF CEEEEEEECCCCEEEEEEEECCCEEEEEECCCCCHHHHHHHHHCCCEECCCCCEECEEEE EYRPELLL ECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA