| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is yitL [H]
Identifier: 146300533
GI number: 146300533
Start: 3315884
End: 3316738
Strand: Direct
Name: yitL [H]
Synonym: Fjoh_2783
Alternate gene names: 146300533
Gene position: 3315884-3316738 (Clockwise)
Preceding gene: 146300532
Following gene: 146300534
Centisome position: 54.39
GC content: 32.51
Gene sequence:
>855_bases ATGCTTGAAATAGGAAAATACAACACACTTACTATATTACGTGATACCAAAGTTGGTTTGTTTTTAGGAAAACCTGAAAT AGATCCAGAAGGAAATTACGATGTTTTACTTCCAAATAAATACGTTCCAAATGAATTTGAAATAGGCGAAGAACTTGTCG TTTTTGTTTATCTGGATCATGAGCAGCGTCCGGTTGCCACAACACTTGAACCTTACATTTTTCTGAATGAATTTGCGCTT TTGAGAGTAAATTATATCAATCAGGTTGGTGCTTTTATGGATTGGGGAATGGAAAAAGATATTCTGGTTCCGTTTAAAGA GCAGGCACGTCCTATGGAAAAAGGAAAACGTTACCTGGTATATTTATATTTAGACGAAAAAACAAACCGTTTAGTTGCTT CAAGTAAAACCAATCAGTTTTTAAATAACGACCATTTAACAGTAGAAAAAGGCGAAGAAGTTGACTTAATTGTATCGCAT ATTACTGAGCTTGGGATAAATGTAATCATTAACGAAAAACACAAAGGACTTTTATACAAAGATGAAGTTTATGATGATTC GATAAGAACCGGTGACAGAATGCGCGGTTATATTAAAAACATTCGTCCTGACAATAAAATAGACGTTGCACTTCAAGTTC AGGGATATCAAAGTATTGAACCAAATGCAGAAAAAATATTAGATGAATTAAGAGCAAACAGAGGATTCTTACGCCTAAAT GATGATTCTCATCCAGAAGACATTAAAACGGTATTAAAAATGAGTAAAAAGACTTTTAAAAAGGCTATAGGAGCTTTATA TAAAGAAAAACTCATTGAAATTAAGGAAGATGGAATTTATCTTGTAAAAGAATAA
Upstream 100 bases:
>100_bases TTATAAGATTTAATCTGGAACATTTTCTATTTGCCATTTTCAAACTTCGTACATTTGCACTTTAGAAATTCAGCTGTTAA CAGCTTAGAACCTTATTATA
Downstream 100 bases:
>100_bases AGTTCAATTAATATATAATAACAAGAAAGGCTGCTCATTACAAGCAGCCTTTCCCTTTTTATTCTAGTTTTAAAAAAAAT TGTAATTAAAAAAAAACAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MLEIGKYNTLTILRDTKVGLFLGKPEIDPEGNYDVLLPNKYVPNEFEIGEELVVFVYLDHEQRPVATTLEPYIFLNEFAL LRVNYINQVGAFMDWGMEKDILVPFKEQARPMEKGKRYLVYLYLDEKTNRLVASSKTNQFLNNDHLTVEKGEEVDLIVSH ITELGINVIINEKHKGLLYKDEVYDDSIRTGDRMRGYIKNIRPDNKIDVALQVQGYQSIEPNAEKILDELRANRGFLRLN DDSHPEDIKTVLKMSKKTFKKAIGALYKEKLIEIKEDGIYLVKE
Sequences:
>Translated_284_residues MLEIGKYNTLTILRDTKVGLFLGKPEIDPEGNYDVLLPNKYVPNEFEIGEELVVFVYLDHEQRPVATTLEPYIFLNEFAL LRVNYINQVGAFMDWGMEKDILVPFKEQARPMEKGKRYLVYLYLDEKTNRLVASSKTNQFLNNDHLTVEKGEEVDLIVSH ITELGINVIINEKHKGLLYKDEVYDDSIRTGDRMRGYIKNIRPDNKIDVALQVQGYQSIEPNAEKILDELRANRGFLRLN DDSHPEDIKTVLKMSKKTFKKAIGALYKEKLIEIKEDGIYLVKE >Mature_284_residues MLEIGKYNTLTILRDTKVGLFLGKPEIDPEGNYDVLLPNKYVPNEFEIGEELVVFVYLDHEQRPVATTLEPYIFLNEFAL LRVNYINQVGAFMDWGMEKDILVPFKEQARPMEKGKRYLVYLYLDEKTNRLVASSKTNQFLNNDHLTVEKGEEVDLIVSH ITELGINVIINEKHKGLLYKDEVYDDSIRTGDRMRGYIKNIRPDNKIDVALQVQGYQSIEPNAEKILDELRANRGFLRLN DDSHPEDIKTVLKMSKKTFKKAIGALYKEKLIEIKEDGIYLVKE
Specific function: Unknown
COG id: COG2996
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 S1 motif domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016027 - InterPro: IPR003029 - InterPro: IPR022967 - InterPro: IPR014464 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32946; Mature: 32946
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS50126 S1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEIGKYNTLTILRDTKVGLFLGKPEIDPEGNYDVLLPNKYVPNEFEIGEELVVFVYLDH CCCCCCCCEEEEEEECCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECC EQRPVATTLEPYIFLNEFALLRVNYINQVGAFMDWGMEKDILVPFKEQARPMEKGKRYLV CCCCCCCCCCCEEEECCEEEEEEHHHHHHHHHHHCCCCCCEECCCHHHCCCHHCCCEEEE YLYLDEKTNRLVASSKTNQFLNNDHLTVEKGEEVDLIVSHITELGINVIINEKHKGLLYK EEEEECCCCEEEECCCCCHHCCCCCEEEECCCCHHHHHHHHHHCCEEEEEECCCCCCEEE DEVYDDSIRTGDRMRGYIKNIRPDNKIDVALQVQGYQSIEPNAEKILDELRANRGFLRLN CCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEC DDSHPEDIKTVLKMSKKTFKKAIGALYKEKLIEIKEDGIYLVKE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEC >Mature Secondary Structure MLEIGKYNTLTILRDTKVGLFLGKPEIDPEGNYDVLLPNKYVPNEFEIGEELVVFVYLDH CCCCCCCCEEEEEEECCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECC EQRPVATTLEPYIFLNEFALLRVNYINQVGAFMDWGMEKDILVPFKEQARPMEKGKRYLV CCCCCCCCCCCEEEECCEEEEEEHHHHHHHHHHHCCCCCCEECCCHHHCCCHHCCCEEEE YLYLDEKTNRLVASSKTNQFLNNDHLTVEKGEEVDLIVSHITELGINVIINEKHKGLLYK EEEEECCCCEEEECCCCCHHCCCCCEEEECCCCHHHHHHHHHHCCEEEEEECCCCCCEEE DEVYDDSIRTGDRMRGYIKNIRPDNKIDVALQVQGYQSIEPNAEKILDELRANRGFLRLN CCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEC DDSHPEDIKTVLKMSKKTFKKAIGALYKEKLIEIKEDGIYLVKE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353932; 9384377 [H]