| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146300464
Identifier: 146300464
GI number: 146300464
Start: 3233222
End: 3235483
Strand: Direct
Name: 146300464
Synonym: Fjoh_2714
Alternate gene names: NA
Gene position: 3233222-3235483 (Clockwise)
Preceding gene: 146300463
Following gene: 146300465
Centisome position: 53.03
GC content: 36.69
Gene sequence:
>2262_bases ATGAGAATAGTATTTAGTGGTTTCCTGGCTTTAAGTTTACTTTTTGTCAATCCAGCAGTTTCACAGCAAAAAAAGGCAAA ACAAGCAGATATCAATTATACGAAATATGTCGATCCGTTTATTGGTTCGGCTGGACATGGACACGTATTTGTGGGAGCAA ATGTTTCTTTTGGAGCTGTACAGTTGGGACCTGTAAATATTTTTGAAGGCTGGGACTGGTGCAGCGGGTATAATTATGCC AGTAATACCATTTTGGGCTTCACACACACACATTTAAGCGGAACCGGAATTGGAGATTTAAATGATATTTTGGTGCTTCC TGTGAGCGGAAAAGTCGGTTTGACCAAAGGAACAAAAGAAGATATGGTAAACGGTTATGGTTCGTATTTCTCTCATAAAA ACGAAGTCGTAAAACCAGGATATTACAGTGTTTTATTAGATAAATATAAAGTTAAAGCCGAATTAACAGCCAGCGAAAGA GTCGGTTTTCATAAATATACTTTTGAAAACACAAACGATTCACACATTTTAATTGATCTTGCCGACGGAATTGGTTGGGA CAGACCCGTAAAAACGTTCATTAAAAAAGTAAGCGAAACCAAAATAGAAGGTTACCGTTATTCGGCAGGATGGGCAGCAG ATCAGCGCATTTATTTTGCAATGGAGTTCTCTGAATCCATTACAAATTTAAAGGTTTATGACAGCACAACGGTGATAAAA GGAACTGAAGGCGAAGGCTTAAAAATAAAAGCGGTTTTAGATTTCAAAACCTTAAAAAATAAACAGATTCTGGTAAAAGT GGGGATTTCTCCAGTAAGTACCGAAAATGCATCTGCCAATATAAAAGCAGAAATTCCGAATTGGGATTTTGAAACTGTAG TTAAACTGGCAGATTCAAAATGGAACAAAGAATTGAATAAAGTTCAGATAAAAGCAGACGAAAAAACAATGAAAGTTTTC TATACTTCATTGTATCATACCATGTTTGCACCTTCTATTTTTAATGATGCGAACGGAGATTATCTTGGAACAGATAAAAA AGTCTACGAAAAAGCCAATTTTACCAATTACACTACTTTTTCGCTTTGGGATACTTACCGCGGACTGCATCCATTGTACA CGATTACGCAGCCAGAAAAAATCAATGATATTGTAAAATCGTTTTTAGCGATTTATCAGCAGCAAGGCAGATTACCGGTT TGGCATTTAATGGGCAACGAAACCAATACCATGAACGGAAATCATTCTATAGCTGTTATTGTCGATGCTTATTTAAAAGG GTATCGTGATTATGATGTCAGCTTAGCATACGAAGCTATTAAAAAAACGGCAATGCAGACGCGTGAGGGAATGGATTACG TTCAAAAACTCGAATATATTCCTGCTGATAAACTATTAGAATCTGTTGGAAACGCTTTAGAATATGCAATCGATGATTAC TGTATTGCTTTGATGGCAAAAGCTTTAAACAAAACAGACGATTACAATTATTTCACGAAAAGAGCCAATTTATACAAACT GTATTTTGATAAAGAAACCACTTTTATGCGTGGTAAATTAACAAATGGAAATTGGAGAACGCCATTTAATCCGCTTTCAT CAGCGCATCGTAAAGACGATTATGTTGAAGGAAATGCGTGGCAGTACACTTGGCTGGTGCCGCAGGATCCGTATGGTTTA ATCGATTTATTTGGAAGCGAAGATAAATTTATCGCAAAACTGGATTCACTTTTCCTGCTGACTGATAAAGTAGAAGGTGA GGATGTTTCGCCAGATATCAGCGGTTTAATTGGTCAGTACGCACACGGAAACGAGCCAAATCATCATATTCCGTATTTGT ATGCTTATGCAGGGCAGCCTTGGAAAACAGCAAAATTAATTCGAGAAATCGACGAAAAATTCTACTCAACAAAACCAGAC GGATTGTGCGGTAATGAAGATTTAGGGCAAATGTCGGCTTGGTATATTTTATCTTCTATGGGATTCTATTCGGTAAATCC GGCAAACGGAATTTATGTTTTGGGAAGTCCGCTGGTAAATACTGCTGTAATTCATCATAAAAAAGATATTTCATTTACGA TAAATGCGGTTAATAACAGCGTTTCAAATATGTACATTCAAAAAGCAGAATATAACGGAAAGCCTTACACAAAATCATAT ATCACGCAAGAAATGATAGTAAAAGGCGGAGAGCTGAAATTATATATGGGAAGCAAACCGTCAACGACATTTGGAGTTAA GAAAGAAGACAGACCTAATTGA
Upstream 100 bases:
>100_bases CAGTTTAGTCTATCTGTAGAAATTAAAAAACGTCAGCGTCAATCAGTTTAATCCGTTTCATCAGCGGGCTAAACAATGCG CAATCAAAAATAAAAAATAT
Downstream 100 bases:
>100_bases TTTTAGATTTTAGAGTGTAGATTTTAGATTTAAGAACTAAGACCATTCAGTTTCCTGCAAGGTTTTTAAAACCTCATAGG TATAAAATTAAAGTTCAGTT
Product: putative alpha-1,2-mannosidase
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Secreted Protein; Sugar Hydrolase; Glycoside Hydrolase Family Protein; Outer Membrane Protein; Immunoreactive; Exported Alpha-1 2-Mannosidase; Antigen; Glycosyltransferase; Alpha-1 2-Mannosidase Protein; Lipoprotein
Number of amino acids: Translated: 753; Mature: 753
Protein sequence:
>753_residues MRIVFSGFLALSLLFVNPAVSQQKKAKQADINYTKYVDPFIGSAGHGHVFVGANVSFGAVQLGPVNIFEGWDWCSGYNYA SNTILGFTHTHLSGTGIGDLNDILVLPVSGKVGLTKGTKEDMVNGYGSYFSHKNEVVKPGYYSVLLDKYKVKAELTASER VGFHKYTFENTNDSHILIDLADGIGWDRPVKTFIKKVSETKIEGYRYSAGWAADQRIYFAMEFSESITNLKVYDSTTVIK GTEGEGLKIKAVLDFKTLKNKQILVKVGISPVSTENASANIKAEIPNWDFETVVKLADSKWNKELNKVQIKADEKTMKVF YTSLYHTMFAPSIFNDANGDYLGTDKKVYEKANFTNYTTFSLWDTYRGLHPLYTITQPEKINDIVKSFLAIYQQQGRLPV WHLMGNETNTMNGNHSIAVIVDAYLKGYRDYDVSLAYEAIKKTAMQTREGMDYVQKLEYIPADKLLESVGNALEYAIDDY CIALMAKALNKTDDYNYFTKRANLYKLYFDKETTFMRGKLTNGNWRTPFNPLSSAHRKDDYVEGNAWQYTWLVPQDPYGL IDLFGSEDKFIAKLDSLFLLTDKVEGEDVSPDISGLIGQYAHGNEPNHHIPYLYAYAGQPWKTAKLIREIDEKFYSTKPD GLCGNEDLGQMSAWYILSSMGFYSVNPANGIYVLGSPLVNTAVIHHKKDISFTINAVNNSVSNMYIQKAEYNGKPYTKSY ITQEMIVKGGELKLYMGSKPSTTFGVKKEDRPN
Sequences:
>Translated_753_residues MRIVFSGFLALSLLFVNPAVSQQKKAKQADINYTKYVDPFIGSAGHGHVFVGANVSFGAVQLGPVNIFEGWDWCSGYNYA SNTILGFTHTHLSGTGIGDLNDILVLPVSGKVGLTKGTKEDMVNGYGSYFSHKNEVVKPGYYSVLLDKYKVKAELTASER VGFHKYTFENTNDSHILIDLADGIGWDRPVKTFIKKVSETKIEGYRYSAGWAADQRIYFAMEFSESITNLKVYDSTTVIK GTEGEGLKIKAVLDFKTLKNKQILVKVGISPVSTENASANIKAEIPNWDFETVVKLADSKWNKELNKVQIKADEKTMKVF YTSLYHTMFAPSIFNDANGDYLGTDKKVYEKANFTNYTTFSLWDTYRGLHPLYTITQPEKINDIVKSFLAIYQQQGRLPV WHLMGNETNTMNGNHSIAVIVDAYLKGYRDYDVSLAYEAIKKTAMQTREGMDYVQKLEYIPADKLLESVGNALEYAIDDY CIALMAKALNKTDDYNYFTKRANLYKLYFDKETTFMRGKLTNGNWRTPFNPLSSAHRKDDYVEGNAWQYTWLVPQDPYGL IDLFGSEDKFIAKLDSLFLLTDKVEGEDVSPDISGLIGQYAHGNEPNHHIPYLYAYAGQPWKTAKLIREIDEKFYSTKPD GLCGNEDLGQMSAWYILSSMGFYSVNPANGIYVLGSPLVNTAVIHHKKDISFTINAVNNSVSNMYIQKAEYNGKPYTKSY ITQEMIVKGGELKLYMGSKPSTTFGVKKEDRPN >Mature_753_residues MRIVFSGFLALSLLFVNPAVSQQKKAKQADINYTKYVDPFIGSAGHGHVFVGANVSFGAVQLGPVNIFEGWDWCSGYNYA SNTILGFTHTHLSGTGIGDLNDILVLPVSGKVGLTKGTKEDMVNGYGSYFSHKNEVVKPGYYSVLLDKYKVKAELTASER VGFHKYTFENTNDSHILIDLADGIGWDRPVKTFIKKVSETKIEGYRYSAGWAADQRIYFAMEFSESITNLKVYDSTTVIK GTEGEGLKIKAVLDFKTLKNKQILVKVGISPVSTENASANIKAEIPNWDFETVVKLADSKWNKELNKVQIKADEKTMKVF YTSLYHTMFAPSIFNDANGDYLGTDKKVYEKANFTNYTTFSLWDTYRGLHPLYTITQPEKINDIVKSFLAIYQQQGRLPV WHLMGNETNTMNGNHSIAVIVDAYLKGYRDYDVSLAYEAIKKTAMQTREGMDYVQKLEYIPADKLLESVGNALEYAIDDY CIALMAKALNKTDDYNYFTKRANLYKLYFDKETTFMRGKLTNGNWRTPFNPLSSAHRKDDYVEGNAWQYTWLVPQDPYGL IDLFGSEDKFIAKLDSLFLLTDKVEGEDVSPDISGLIGQYAHGNEPNHHIPYLYAYAGQPWKTAKLIREIDEKFYSTKPD GLCGNEDLGQMSAWYILSSMGFYSVNPANGIYVLGSPLVNTAVIHHKKDISFTINAVNNSVSNMYIQKAEYNGKPYTKSY ITQEMIVKGGELKLYMGSKPSTTFGVKKEDRPN
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84864; Mature: 84864
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIVFSGFLALSLLFVNPAVSQQKKAKQADINYTKYVDPFIGSAGHGHVFVGANVSFGAV CEEEEHHHHHHHHHHHCCCHHHHHHHHHCCCCHHEECCHHHCCCCCCEEEEECCCCCCEE QLGPVNIFEGWDWCSGYNYASNTILGFTHTHLSGTGIGDLNDILVLPVSGKVGLTKGTKE EECCEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCHH DMVNGYGSYFSHKNEVVKPGYYSVLLDKYKVKAELTASERVGFHKYTFENTNDSHILIDL HHHHHHHHHHCCCCCCCCCCHHEEEEEEEEEEEEEEHHHCCCEEEEEECCCCCCEEEEEE ADGIGWDRPVKTFIKKVSETKIEGYRYSAGWAADQRIYFAMEFSESITNLKVYDSTTVIK CCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEECCCCCEEEEECCEEEEE GTEGEGLKIKAVLDFKTLKNKQILVKVGISPVSTENASANIKAEIPNWDFETVVKLADSK CCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHH WNKELNKVQIKADEKTMKVFYTSLYHTMFAPSIFNDANGDYLGTDKKVYEKANFTNYTTF HCCCCEEEEEEECCHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCHHHHHHCCCCCEEEE SLWDTYRGLHPLYTITQPEKINDIVKSFLAIYQQQGRLPVWHLMGNETNTMNGNHSIAVI EHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEE VDAYLKGYRDYDVSLAYEAIKKTAMQTREGMDYVQKLEYIPADKLLESVGNALEYAIDDY EEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH CIALMAKALNKTDDYNYFTKRANLYKLYFDKETTFMRGKLTNGNWRTPFNPLSSAHRKDD HHHHHHHHHCCCCCCCCEECCCCEEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHCCCC YVEGNAWQYTWLVPQDPYGLIDLFGSEDKFIAKLDSLFLLTDKVEGEDVSPDISGLIGQY CCCCCCEEEEEECCCCCCCEEEECCCCCHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHH AHGNEPNHHIPYLYAYAGQPWKTAKLIREIDEKFYSTKPDGLCGNEDLGQMSAWYILSSM CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC GFYSVNPANGIYVLGSPLVNTAVIHHKKDISFTINAVNNSVSNMYIQKAEYNGKPYTKSY CCEEECCCCCEEEECCCHHHHHHEEECCCCEEEEEECCCCCHHEEEEEECCCCCCCCHHH ITQEMIVKGGELKLYMGSKPSTTFGVKKEDRPN HHHHHHHCCCEEEEEECCCCCCEECCCCCCCCC >Mature Secondary Structure MRIVFSGFLALSLLFVNPAVSQQKKAKQADINYTKYVDPFIGSAGHGHVFVGANVSFGAV CEEEEHHHHHHHHHHHCCCHHHHHHHHHCCCCHHEECCHHHCCCCCCEEEEECCCCCCEE QLGPVNIFEGWDWCSGYNYASNTILGFTHTHLSGTGIGDLNDILVLPVSGKVGLTKGTKE EECCEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCHH DMVNGYGSYFSHKNEVVKPGYYSVLLDKYKVKAELTASERVGFHKYTFENTNDSHILIDL HHHHHHHHHHCCCCCCCCCCHHEEEEEEEEEEEEEEHHHCCCEEEEEECCCCCCEEEEEE ADGIGWDRPVKTFIKKVSETKIEGYRYSAGWAADQRIYFAMEFSESITNLKVYDSTTVIK CCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEECCCCCEEEEECCEEEEE GTEGEGLKIKAVLDFKTLKNKQILVKVGISPVSTENASANIKAEIPNWDFETVVKLADSK CCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHH WNKELNKVQIKADEKTMKVFYTSLYHTMFAPSIFNDANGDYLGTDKKVYEKANFTNYTTF HCCCCEEEEEEECCHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCHHHHHHCCCCCEEEE SLWDTYRGLHPLYTITQPEKINDIVKSFLAIYQQQGRLPVWHLMGNETNTMNGNHSIAVI EHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEE VDAYLKGYRDYDVSLAYEAIKKTAMQTREGMDYVQKLEYIPADKLLESVGNALEYAIDDY EEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH CIALMAKALNKTDDYNYFTKRANLYKLYFDKETTFMRGKLTNGNWRTPFNPLSSAHRKDD HHHHHHHHHCCCCCCCCEECCCCEEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHCCCC YVEGNAWQYTWLVPQDPYGLIDLFGSEDKFIAKLDSLFLLTDKVEGEDVSPDISGLIGQY CCCCCCEEEEEECCCCCCCEEEECCCCCHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHH AHGNEPNHHIPYLYAYAGQPWKTAKLIREIDEKFYSTKPDGLCGNEDLGQMSAWYILSSM CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC GFYSVNPANGIYVLGSPLVNTAVIHHKKDISFTINAVNNSVSNMYIQKAEYNGKPYTKSY CCEEECCCCCEEEECCCHHHHHHEEECCCCEEEEEECCCCCHHEEEEEECCCCCCCCHHH ITQEMIVKGGELKLYMGSKPSTTFGVKKEDRPN HHHHHHHCCCEEEEEECCCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA