Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300463

Identifier: 146300463

GI number: 146300463

Start: 3231084

End: 3233075

Strand: Direct

Name: 146300463

Synonym: Fjoh_2713

Alternate gene names: NA

Gene position: 3231084-3233075 (Clockwise)

Preceding gene: 146300462

Following gene: 146300464

Centisome position: 53.0

GC content: 35.34

Gene sequence:

>1992_bases
ATGAATTATCAAAATAAACTTCATTGTATAATGTCCCTTTGTCTGGCAGGTTTTACATCAATTGCCTTTGCACAAAAAAT
TGAATTAAAAAGTAATTGGACATATCGTGAAGAAAAAACACAAAAATGGTATACGGCCAGCGTTCCGGGAGAAATCCATA
CCGATTTGCTAAACAGCAAATTAATACCAGACCCATTTTACAGAGATAACGAAAAAAAACTGCAGTGGATCGAACGTAAA
AACTGGGAATACAAAACTGCTTTTCAGGTTACGGCAAATATGCTGAAAAAGAAAAATACAGAATTAGTTTTTGACGGATT
AGATACTTACGCAGCTGTTTATGTAAACAATCAGCTGGTTTTAAAAGCCGATAATATGTTCCGTCAATGGCGGGTTGATG
TAAAAAAAGTCTTGAAATCAGGAAATAATGATTTACGAATCGTATTTCAATCGGCACAAAATGTGGTAGATTCATTGGCA
AAAAAAGATTACCCATTTGTAATTCCAGACAATCCGCGTACTTATGTACGCAAAGCCCAATACCATTTTGGCTGGGATTG
GGGACCAAAATTCACAACCTGCGGCATATGGAAAACACCAAGATTTGAAGCTTATGATGAAAAAGAACCTGAGAAACCGT
ATGTATTAACTCGAAAAATCGAATTAATACAAGACAAAGACAGTCTTGGCAGTTCGTTTTATTTTAAAATTGACGGAAAC
CCGGTTTATATGAAAGGAGCTAATTATATTCCATCTGATGCTTTTCTTTCAAGAGTATCTAAAAAAGAATATGAAAAAAT
AGTTTTATCTGCCAAAGAGGCCAATATGAATATGCTTCGCGTTTGGGGCGGCGGTATTTATGAAGACGATTATTTCTACG
ATTTATGTGATAAATACGGTATAAATGTCTGGCAGGATTTTATGTTTGCAGGTACTATGGTTCCCGGAGACGATGCTTTT
TTTGAAAATGTAAAAAAAGAAGTTCAATATCAGGTAAAAAGACTGCGTCATCATCCAAGTATTGTTTTATGGTGCGGCAA
CAACGAATCTGATGAAGCTTTTAAAAACTGGGGCTGGATGAAAAATTTCAAAATTTCAAAGCAGGATTCCATTCGTTTGT
GGAAAGATTACACACGTTTATTTCATGACAGTATTCCGAAATGGGTAAAAGAAGTCGATGGTAAACGTCCGTATTTAAGC
TCTTCACCATTATACCATTGGTCAAAACCAAAAAGCGTAACCGAAGGAGACAGCCATTATTGGGGAATCTGGTGGGGATT
GGAAGATATTGAAGCCGTACAGAAAAAAACGGGACGATTTGTGAGCGAATACGGAATGCTGTCGATGCCAAATTATTCGT
CTGTAGAAGTATTTACTCTGCCTGAAGACCGATATTTATATTCGGATATAGTATTGGCGCATCAAAAATCTGGAAAAGGA
TTTGAAAAGCTGGATTCCTATTTAAACAGGTATTTTATCGATTCGGCTAAAATAAAAAACATAAGTTTAGAAGATTATAC
CTATTTAACGCAATGTCTTCAATACTATGTTGTTAAAAATATCGCAGGCACACATCGTTCTAAAGAACCGTACAATATGG
GAACTTTAATCTGGCAGTTAAACGACTGCTGGCCAACAGCAAGCTGGAGTATTACAGATTATTATAACCGCGAACCACGA
GCTTCGTGGTATGCCATAAGAGAAGCGTACAGAGACGATGTAAAACCAGAAACTGATTTTATACGCCCAAGAGATTTATC
TTTAGAAGATCCAAAAATCAACTGGGAAATAAAAGGAAATAACATAATTATAAAAGCTCTGAAAATGGCAAAATACGTTT
ACATCTCTATGAAAGGATATAATGGAAAATGGAGCGATAATTATTTTGATCTAAAAGCAGGAGAAGAAAAAACAATTTCG
TTTGAAGGGAAAATAACGAAGCCAGAGATTAAGATTTATTCTTTGTTTGAGGTTTTGGAAAAGTATAAATAA

Upstream 100 bases:

>100_bases
GAATGATTTAGTACATCCTTTTCCTTCTCGAAACTGCCAATAGTCCGAATTACTTACCTTTTTACTAATTTTAGAAGGTA
TTAATATATTACTCAGTAAA

Downstream 100 bases:

>100_bases
AGTTACAAAGGTTCAAAGAGACAAAGGGGCAATGTTTTTTTTAAAACAGTTTAGTCTATCTGTAGAAATTAAAAAACGTC
AGCGTCAATCAGTTTAATCC

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family Protein; Beta-Mannosidase Protein; Glycoside Hydrolase; Mannosidase; Glycosyl Hydrolase; Glycoside Hydrolase Family 2 Protein; Glycosidase; O-Glycosyl Hydrolase; Coagulation Factor 5/8 Type Domain Protein; Glycoside Hydrolase Family 2 TIM Barrel; Beta-Galactosidase/Beta-Glucuronidase; Beta-Glucuronidase; Exported Glycosyl Hydrolase; Mannosylglycoprotein Endo-Beta-Mannosidase; Beta-Mannosidase-Related Protein; Beta-Galactosidase/Beta- Glucuronidase Family Protein; Beta-Mannosidase Man2A; BETA-Mannosidase Protein; Beta-Galactosidase/Beta; Exported Beta-Mannosidase-Like Glycosidase; Beta-D-Mannosidase

Number of amino acids: Translated: 663; Mature: 663

Protein sequence:

>663_residues
MNYQNKLHCIMSLCLAGFTSIAFAQKIELKSNWTYREEKTQKWYTASVPGEIHTDLLNSKLIPDPFYRDNEKKLQWIERK
NWEYKTAFQVTANMLKKKNTELVFDGLDTYAAVYVNNQLVLKADNMFRQWRVDVKKVLKSGNNDLRIVFQSAQNVVDSLA
KKDYPFVIPDNPRTYVRKAQYHFGWDWGPKFTTCGIWKTPRFEAYDEKEPEKPYVLTRKIELIQDKDSLGSSFYFKIDGN
PVYMKGANYIPSDAFLSRVSKKEYEKIVLSAKEANMNMLRVWGGGIYEDDYFYDLCDKYGINVWQDFMFAGTMVPGDDAF
FENVKKEVQYQVKRLRHHPSIVLWCGNNESDEAFKNWGWMKNFKISKQDSIRLWKDYTRLFHDSIPKWVKEVDGKRPYLS
SSPLYHWSKPKSVTEGDSHYWGIWWGLEDIEAVQKKTGRFVSEYGMLSMPNYSSVEVFTLPEDRYLYSDIVLAHQKSGKG
FEKLDSYLNRYFIDSAKIKNISLEDYTYLTQCLQYYVVKNIAGTHRSKEPYNMGTLIWQLNDCWPTASWSITDYYNREPR
ASWYAIREAYRDDVKPETDFIRPRDLSLEDPKINWEIKGNNIIIKALKMAKYVYISMKGYNGKWSDNYFDLKAGEEKTIS
FEGKITKPEIKIYSLFEVLEKYK

Sequences:

>Translated_663_residues
MNYQNKLHCIMSLCLAGFTSIAFAQKIELKSNWTYREEKTQKWYTASVPGEIHTDLLNSKLIPDPFYRDNEKKLQWIERK
NWEYKTAFQVTANMLKKKNTELVFDGLDTYAAVYVNNQLVLKADNMFRQWRVDVKKVLKSGNNDLRIVFQSAQNVVDSLA
KKDYPFVIPDNPRTYVRKAQYHFGWDWGPKFTTCGIWKTPRFEAYDEKEPEKPYVLTRKIELIQDKDSLGSSFYFKIDGN
PVYMKGANYIPSDAFLSRVSKKEYEKIVLSAKEANMNMLRVWGGGIYEDDYFYDLCDKYGINVWQDFMFAGTMVPGDDAF
FENVKKEVQYQVKRLRHHPSIVLWCGNNESDEAFKNWGWMKNFKISKQDSIRLWKDYTRLFHDSIPKWVKEVDGKRPYLS
SSPLYHWSKPKSVTEGDSHYWGIWWGLEDIEAVQKKTGRFVSEYGMLSMPNYSSVEVFTLPEDRYLYSDIVLAHQKSGKG
FEKLDSYLNRYFIDSAKIKNISLEDYTYLTQCLQYYVVKNIAGTHRSKEPYNMGTLIWQLNDCWPTASWSITDYYNREPR
ASWYAIREAYRDDVKPETDFIRPRDLSLEDPKINWEIKGNNIIIKALKMAKYVYISMKGYNGKWSDNYFDLKAGEEKTIS
FEGKITKPEIKIYSLFEVLEKYK
>Mature_663_residues
MNYQNKLHCIMSLCLAGFTSIAFAQKIELKSNWTYREEKTQKWYTASVPGEIHTDLLNSKLIPDPFYRDNEKKLQWIERK
NWEYKTAFQVTANMLKKKNTELVFDGLDTYAAVYVNNQLVLKADNMFRQWRVDVKKVLKSGNNDLRIVFQSAQNVVDSLA
KKDYPFVIPDNPRTYVRKAQYHFGWDWGPKFTTCGIWKTPRFEAYDEKEPEKPYVLTRKIELIQDKDSLGSSFYFKIDGN
PVYMKGANYIPSDAFLSRVSKKEYEKIVLSAKEANMNMLRVWGGGIYEDDYFYDLCDKYGINVWQDFMFAGTMVPGDDAF
FENVKKEVQYQVKRLRHHPSIVLWCGNNESDEAFKNWGWMKNFKISKQDSIRLWKDYTRLFHDSIPKWVKEVDGKRPYLS
SSPLYHWSKPKSVTEGDSHYWGIWWGLEDIEAVQKKTGRFVSEYGMLSMPNYSSVEVFTLPEDRYLYSDIVLAHQKSGKG
FEKLDSYLNRYFIDSAKIKNISLEDYTYLTQCLQYYVVKNIAGTHRSKEPYNMGTLIWQLNDCWPTASWSITDYYNREPR
ASWYAIREAYRDDVKPETDFIRPRDLSLEDPKINWEIKGNNIIIKALKMAKYVYISMKGYNGKWSDNYFDLKAGEEKTIS
FEGKITKPEIKIYSLFEVLEKYK

Specific function: Unknown

COG id: COG3250

COG function: function code G; Beta-galactosidase/beta-glucuronidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI84798622, Length=360, Percent_Identity=38.6111111111111, Blast_Score=228, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI17550784, Length=384, Percent_Identity=30.9895833333333, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24643840, Length=354, Percent_Identity=32.2033898305085, Blast_Score=172, Evalue=5e-43,
Organism=Drosophila melanogaster, GI24643838, Length=375, Percent_Identity=31.4666666666667, Blast_Score=172, Evalue=8e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78328; Mature: 78328

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYQNKLHCIMSLCLAGFTSIAFAQKIELKSNWTYREEKTQKWYTASVPGEIHTDLLNSK
CCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHCCC
LIPDPFYRDNEKKLQWIERKNWEYKTAFQVTANMLKKKNTELVFDGLDTYAAVYVNNQLV
CCCCCCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCEEE
LKADNMFRQWRVDVKKVLKSGNNDLRIVFQSAQNVVDSLAKKDYPFVIPDNPRTYVRKAQ
EEEHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCEEECCCCHHHHHHCC
YHFGWDWGPKFTTCGIWKTPRFEAYDEKEPEKPYVLTRKIELIQDKDSLGSSFYFKIDGN
EECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEECCC
PVYMKGANYIPSDAFLSRVSKKEYEKIVLSAKEANMNMLRVWGGGIYEDDYFYDLCDKYG
EEEEECCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCEEEEECCCCCCCCHHHHHHHHCC
INVWQDFMFAGTMVPGDDAFFENVKKEVQYQVKRLRHHPSIVLWCGNNESDEAFKNWGWM
CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCC
KNFKISKQDSIRLWKDYTRLFHDSIPKWVKEVDGKRPYLSSSPLYHWSKPKSVTEGDSHY
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCEE
WGIWWGLEDIEAVQKKTGRFVSEYGMLSMPNYSSVEVFTLPEDRYLYSDIVLAHQKSGKG
EEEEECHHHHHHHHHHHCCHHHHCCCEECCCCCCEEEEECCCCCEEHHHEEEEECCCCCC
FEKLDSYLNRYFIDSAKIKNISLEDYTYLTQCLQYYVVKNIAGTHRSKEPYNMGTLIWQL
HHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
NDCWPTASWSITDYYNREPRASWYAIREAYRDDVKPETDFIRPRDLSLEDPKINWEIKGN
ECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECC
NIIIKALKMAKYVYISMKGYNGKWSDNYFDLKAGEEKTISFEGKITKPEIKIYSLFEVLE
CEEEEEEHEEEEEEEEEECCCCCCCCCEEEEECCCCCEEEECCEECCCCCHHHHHHHHHH
KYK
HCC
>Mature Secondary Structure
MNYQNKLHCIMSLCLAGFTSIAFAQKIELKSNWTYREEKTQKWYTASVPGEIHTDLLNSK
CCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHCCC
LIPDPFYRDNEKKLQWIERKNWEYKTAFQVTANMLKKKNTELVFDGLDTYAAVYVNNQLV
CCCCCCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCEEE
LKADNMFRQWRVDVKKVLKSGNNDLRIVFQSAQNVVDSLAKKDYPFVIPDNPRTYVRKAQ
EEEHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCEEECCCCHHHHHHCC
YHFGWDWGPKFTTCGIWKTPRFEAYDEKEPEKPYVLTRKIELIQDKDSLGSSFYFKIDGN
EECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEECCC
PVYMKGANYIPSDAFLSRVSKKEYEKIVLSAKEANMNMLRVWGGGIYEDDYFYDLCDKYG
EEEEECCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCEEEEECCCCCCCCHHHHHHHHCC
INVWQDFMFAGTMVPGDDAFFENVKKEVQYQVKRLRHHPSIVLWCGNNESDEAFKNWGWM
CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCC
KNFKISKQDSIRLWKDYTRLFHDSIPKWVKEVDGKRPYLSSSPLYHWSKPKSVTEGDSHY
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCEE
WGIWWGLEDIEAVQKKTGRFVSEYGMLSMPNYSSVEVFTLPEDRYLYSDIVLAHQKSGKG
EEEEECHHHHHHHHHHHCCHHHHCCCEECCCCCCEEEEECCCCCEEHHHEEEEECCCCCC
FEKLDSYLNRYFIDSAKIKNISLEDYTYLTQCLQYYVVKNIAGTHRSKEPYNMGTLIWQL
HHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
NDCWPTASWSITDYYNREPRASWYAIREAYRDDVKPETDFIRPRDLSLEDPKINWEIKGN
ECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECC
NIIIKALKMAKYVYISMKGYNGKWSDNYFDLKAGEEKTISFEGKITKPEIKIYSLFEVLE
CEEEEEEHEEEEEEEEEECCCCCCCCCEEEEECCCCCEEEECCEECCCCCHHHHHHHHHH
KYK
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA