| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300443
Identifier: 146300443
GI number: 146300443
Start: 3202622
End: 3203590
Strand: Reverse
Name: 146300443
Synonym: Fjoh_2692
Alternate gene names: NA
Gene position: 3203590-3202622 (Counterclockwise)
Preceding gene: 146300444
Following gene: 146300442
Centisome position: 52.54
GC content: 26.83
Gene sequence:
>969_bases ATGGAAAATAGAAAGTTAGAAATATATACTTTTATAGCTCACCCAAATAGGAAACCAACTGAAAATGTAGTTTTAGAAGA TGTATTTGGTAATGATTTATATCTTAAGCTTAAGAATGGATTTCCTAACTTTGTTGATACTTTTCCTCCTTTGCAAATAG ATGATAAAACTGCAAAAATTGAAAAAATAAAAAATGGCAATGAAGTAAAAAGTATTTTCAAATTTAATGATTCACTAAGA TATATTGCCGGTAAAATCATGATTGGAGATGATGACGGTAAAGAACAAGATGTAGTAGAAAGTAATAAAGAAAAAACAGT TCTCTATACCAAAAAGAAAGGTCAATCAGTAGAAAGACCTTATTACTTTATGATAATTGTTCCTCTAGGTCTGAAATATG GGTTTATTGTTTTAGAAAGAGAAGGTAAGCATTCTGCAAAAGGTGTTTTTGACAAACTTTTTAGAAAATTTGTATATGAA AATTTATCTGGTTTAAATTGTAAAATAAGCAATTTTGTTGAATCTGAAATTATCAAAGAATACTTAGAATTTGGTCAATA TAATAGCATTACTTTAAGCCAAAAAATTATTTCCAGCGACAAGGCGGAACAATATTTAGGAACTTATATTGATGGTTCAA AATATAAAGTCGAACTTCGAATTATTCCATTAGAGAATTCAGTGATTCCTTTTAATACAAAAAAGAAAATACTAAAAAAC TTAGAAAATAATGAAGGGTTTTTCGAAGGAACAGAGTTTAGAAATATTGGATTTGATGATGATGCAAATGTTAAGGTCGT GGCAACAAAAGATGGAAATACCAGAACCATTGATTTAGAAGATACCTTTAAAGTTAGACCTTATTACGTTATCAATGTAG CTAATAATAATAAAGGCTTTTCTGATTTTAAAAATATAAATAAAGAAGCTAAGAAATTAATCAGAGGTTTTGATTTAAAT ATTTTATAA
Upstream 100 bases:
>100_bases AATATTTGTTCGTTTACTGGTAATTAAATTATACTTAATTTCTCTTAATTAAAATGTATGTTAAATAAGCCTTTTGTAAT TATCAACCTTGAGAAAAGAT
Downstream 100 bases:
>100_bases TGTATTCAAAACTAAATATAAAAAATATTATAATCGGTCACAAAGACTCTTTAGTTAATGTAAAGAATAAGTCCGATTAT AAAAAAGAATTTATTTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MENRKLEIYTFIAHPNRKPTENVVLEDVFGNDLYLKLKNGFPNFVDTFPPLQIDDKTAKIEKIKNGNEVKSIFKFNDSLR YIAGKIMIGDDDGKEQDVVESNKEKTVLYTKKKGQSVERPYYFMIIVPLGLKYGFIVLEREGKHSAKGVFDKLFRKFVYE NLSGLNCKISNFVESEIIKEYLEFGQYNSITLSQKIISSDKAEQYLGTYIDGSKYKVELRIIPLENSVIPFNTKKKILKN LENNEGFFEGTEFRNIGFDDDANVKVVATKDGNTRTIDLEDTFKVRPYYVINVANNNKGFSDFKNINKEAKKLIRGFDLN IL
Sequences:
>Translated_322_residues MENRKLEIYTFIAHPNRKPTENVVLEDVFGNDLYLKLKNGFPNFVDTFPPLQIDDKTAKIEKIKNGNEVKSIFKFNDSLR YIAGKIMIGDDDGKEQDVVESNKEKTVLYTKKKGQSVERPYYFMIIVPLGLKYGFIVLEREGKHSAKGVFDKLFRKFVYE NLSGLNCKISNFVESEIIKEYLEFGQYNSITLSQKIISSDKAEQYLGTYIDGSKYKVELRIIPLENSVIPFNTKKKILKN LENNEGFFEGTEFRNIGFDDDANVKVVATKDGNTRTIDLEDTFKVRPYYVINVANNNKGFSDFKNINKEAKKLIRGFDLN IL >Mature_322_residues MENRKLEIYTFIAHPNRKPTENVVLEDVFGNDLYLKLKNGFPNFVDTFPPLQIDDKTAKIEKIKNGNEVKSIFKFNDSLR YIAGKIMIGDDDGKEQDVVESNKEKTVLYTKKKGQSVERPYYFMIIVPLGLKYGFIVLEREGKHSAKGVFDKLFRKFVYE NLSGLNCKISNFVESEIIKEYLEFGQYNSITLSQKIISSDKAEQYLGTYIDGSKYKVELRIIPLENSVIPFNTKKKILKN LENNEGFFEGTEFRNIGFDDDANVKVVATKDGNTRTIDLEDTFKVRPYYVINVANNNKGFSDFKNINKEAKKLIRGFDLN IL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37141; Mature: 37141
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENRKLEIYTFIAHPNRKPTENVVLEDVFGNDLYLKLKNGFPNFVDTFPPLQIDDKTAKI CCCCEEEEEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCHHHCCCCCEECCCHHHH EKIKNGNEVKSIFKFNDSLRYIAGKIMIGDDDGKEQDVVESNKEKTVLYTKKKGQSVERP HHCCCCCHHHHHHHCCCCEEEEEEEEEECCCCCCCCHHHHCCCCEEEEEEECCCCCCCCC YYFMIIVPLGLKYGFIVLEREGKHSAKGVFDKLFRKFVYENLSGLNCKISNFVESEIIKE EEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHH YLEFGQYNSITLSQKIISSDKAEQYLGTYIDGSKYKVELRIIPLENSVIPFNTKKKILKN HHHHCCCCCEEHHHHHHCCCHHHHHHHEEECCCEEEEEEEEEECCCCEECCCCHHHHHHH LENNEGFFEGTEFRNIGFDDDANVKVVATKDGNTRTIDLEDTFKVRPYYVINVANNNKGF CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCEEECCEEEEEEECCCCCH SDFKNINKEAKKLIRGFDLNIL HHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MENRKLEIYTFIAHPNRKPTENVVLEDVFGNDLYLKLKNGFPNFVDTFPPLQIDDKTAKI CCCCEEEEEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCHHHCCCCCEECCCHHHH EKIKNGNEVKSIFKFNDSLRYIAGKIMIGDDDGKEQDVVESNKEKTVLYTKKKGQSVERP HHCCCCCHHHHHHHCCCCEEEEEEEEEECCCCCCCCHHHHCCCCEEEEEEECCCCCCCCC YYFMIIVPLGLKYGFIVLEREGKHSAKGVFDKLFRKFVYENLSGLNCKISNFVESEIIKE EEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHH YLEFGQYNSITLSQKIISSDKAEQYLGTYIDGSKYKVELRIIPLENSVIPFNTKKKILKN HHHHCCCCCEEHHHHHHCCCHHHHHHHEEECCCEEEEEEEEEECCCCEECCCCHHHHHHH LENNEGFFEGTEFRNIGFDDDANVKVVATKDGNTRTIDLEDTFKVRPYYVINVANNNKGF CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCEEECCEEEEEEECCCCCH SDFKNINKEAKKLIRGFDLNIL HHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA