Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300417

Identifier: 146300417

GI number: 146300417

Start: 3169433

End: 3171112

Strand: Direct

Name: 146300417

Synonym: Fjoh_2666

Alternate gene names: NA

Gene position: 3169433-3171112 (Clockwise)

Preceding gene: 146300414

Following gene: 146300418

Centisome position: 51.98

GC content: 37.92

Gene sequence:

>1680_bases
ATGATGATCCTAATGCTTATGAAAAAAAACTACCTCTTATTTTTTATTTTATTGTCGTTTTTAACTTACTCACAAGATAT
TCTTTGGGAAAAGTCTTATGGCGGCATTCATGCAGATTACCTTTTTGATGCACAGCCTACAGCCGACTATGGGTTTATTC
TGGCTGGCAGCTCCCTTTCTAACAAAACCGGAAATAAAGACGAAGATAATCATGGAGATCTTGATTATTGGATCTGGAAA
ATGAATGAAAAAGGAGAACTCGACTGGCAGAAAAGTATTGGAGGAAATGGATTTGATCTTCTTCAAAGTATAAAAGGAAC
CAGAGACGGAGGTTTTATTCTGGCAGGAACTTCAAGTTCAGGAAACAGTTTTCAGAAAAAAGACAATTGTAAAGGCCTTA
CTGATTTTTGGGTTATCAAACTAGACGCTTCCGGTGAAGAGCAATGGCAGAGAACTATTGGCGGTGATGGTCAGGATGAA
CTTTTATGTGCTTTCCAGACCAAAGACGGCGGTTATATTTTAGGCGGCTCATCGAGCTCAAGCCCTTCTTCTGTTACAAA
TATTAAGGCAGAAGGAAAAATGGACGCTTTTCCTCAAACAGATTTATACAGCAAATCAGAAAAAAGCCGTGGTAATATGG
ATTACTGGATCGTAAAACTCGATAAAGAAGGAGTTATCGAGTGGCAGAAAACTTACGGTGGTAAATATGCTGATGTATTA
AGAAGCATGGAACAAACAGCTGATAACGGCTATATTTTGGCAGGATATTCAAATTCACCTGTTTCAGGAGATAAAGCTGA
CGCTAATAAGGGAGTGGGTGATTACTGGATTATTAAAATAGATGACTCAGGTGCTGTTCAATGGCAGTCATCGTATGGAG
GAGATGGCGATGACCAGCCTTATGTAATTCATCAAACGGCAGATGGCGGCTATATTCTGGGAGGCAATTCCAACAGTACA
AATCCTTTGACCACCCTTGGAGGAATCGTAAGTAATGGAACTGATTTTTGGATTTTGAGACTAGACCACGAAGGAGGAGT
TGTATGGAGTAAAACTTATGATTTTGGAAAAGTAGATATTTTAACTTCCCTTGTAGAAAATAATGATAACACTTATTTAA
TTGGAGGTTACGCAAAATCTGAAGCTAAGCAGTCTTTGCTTGGAGATGCCGCTAAAAAAGCCGGGACTGGAAAGGATAAG
GAAGGAATTAATGATTATATCGCATTAAAGATAGATGAAAAAGGAGAAGAATTATGGAAGAAAACCGTTGGGAGTGCCGG
AGAAGATATTCTGCGAAAACTTATAGAAACCAGAGACGGAGGCTATTTAATGGCGGGAACATCAAATTCAGGTTCTTCAA
AAGATAAAAAATCAACCATAGGAGGAAATGATTTTTGGGTTGTGAAGCTGAAAGATAAGGCTAAAGTTGAAAAAGTAAAA
GCAAGTATTGAGGCTATTCCAAATCCTGCTGTTACTTACACCAACGTAATTATAGGCTATGATTTTACAGAAGGAACAGC
TTCGGTCATTGATATTTTAGGCAGGATTTTACAACAGTTCAGTATCAACAGCAGAACCGTTCCTGTTGACTTAAGTCATT
ATGCAGAGGGAATTTATATCATTAAAATTAAGACTGATGTAAAAACAGAGTCAGTTAAAGTAATTAAAACCGTACGATAG

Upstream 100 bases:

>100_bases
TTCTGCGTTTTTTCACAGTTGAACAAATAAATATCATGTTAAAAAAAAGGATAATATTTTAGTGGATGTTCCTTATAAAT
TTGCCTGTAAAATTTATATA

Downstream 100 bases:

>100_bases
AAAATGTTTAAAATAAACTACAATTTAAAAGGCTTAATTAGTATTTTTCTTTTTATGCTGATGTCCACGCTTACTTATGG
GCAGACAGAAAATGATCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MMILMLMKKNYLLFFILLSFLTYSQDILWEKSYGGIHADYLFDAQPTADYGFILAGSSLSNKTGNKDEDNHGDLDYWIWK
MNEKGELDWQKSIGGNGFDLLQSIKGTRDGGFILAGTSSSGNSFQKKDNCKGLTDFWVIKLDASGEEQWQRTIGGDGQDE
LLCAFQTKDGGYILGGSSSSSPSSVTNIKAEGKMDAFPQTDLYSKSEKSRGNMDYWIVKLDKEGVIEWQKTYGGKYADVL
RSMEQTADNGYILAGYSNSPVSGDKADANKGVGDYWIIKIDDSGAVQWQSSYGGDGDDQPYVIHQTADGGYILGGNSNST
NPLTTLGGIVSNGTDFWILRLDHEGGVVWSKTYDFGKVDILTSLVENNDNTYLIGGYAKSEAKQSLLGDAAKKAGTGKDK
EGINDYIALKIDEKGEELWKKTVGSAGEDILRKLIETRDGGYLMAGTSNSGSSKDKKSTIGGNDFWVVKLKDKAKVEKVK
ASIEAIPNPAVTYTNVIIGYDFTEGTASVIDILGRILQQFSINSRTVPVDLSHYAEGIYIIKIKTDVKTESVKVIKTVR

Sequences:

>Translated_559_residues
MMILMLMKKNYLLFFILLSFLTYSQDILWEKSYGGIHADYLFDAQPTADYGFILAGSSLSNKTGNKDEDNHGDLDYWIWK
MNEKGELDWQKSIGGNGFDLLQSIKGTRDGGFILAGTSSSGNSFQKKDNCKGLTDFWVIKLDASGEEQWQRTIGGDGQDE
LLCAFQTKDGGYILGGSSSSSPSSVTNIKAEGKMDAFPQTDLYSKSEKSRGNMDYWIVKLDKEGVIEWQKTYGGKYADVL
RSMEQTADNGYILAGYSNSPVSGDKADANKGVGDYWIIKIDDSGAVQWQSSYGGDGDDQPYVIHQTADGGYILGGNSNST
NPLTTLGGIVSNGTDFWILRLDHEGGVVWSKTYDFGKVDILTSLVENNDNTYLIGGYAKSEAKQSLLGDAAKKAGTGKDK
EGINDYIALKIDEKGEELWKKTVGSAGEDILRKLIETRDGGYLMAGTSNSGSSKDKKSTIGGNDFWVVKLKDKAKVEKVK
ASIEAIPNPAVTYTNVIIGYDFTEGTASVIDILGRILQQFSINSRTVPVDLSHYAEGIYIIKIKTDVKTESVKVIKTVR
>Mature_559_residues
MMILMLMKKNYLLFFILLSFLTYSQDILWEKSYGGIHADYLFDAQPTADYGFILAGSSLSNKTGNKDEDNHGDLDYWIWK
MNEKGELDWQKSIGGNGFDLLQSIKGTRDGGFILAGTSSSGNSFQKKDNCKGLTDFWVIKLDASGEEQWQRTIGGDGQDE
LLCAFQTKDGGYILGGSSSSSPSSVTNIKAEGKMDAFPQTDLYSKSEKSRGNMDYWIVKLDKEGVIEWQKTYGGKYADVL
RSMEQTADNGYILAGYSNSPVSGDKADANKGVGDYWIIKIDDSGAVQWQSSYGGDGDDQPYVIHQTADGGYILGGNSNST
NPLTTLGGIVSNGTDFWILRLDHEGGVVWSKTYDFGKVDILTSLVENNDNTYLIGGYAKSEAKQSLLGDAAKKAGTGKDK
EGINDYIALKIDEKGEELWKKTVGSAGEDILRKLIETRDGGYLMAGTSNSGSSKDKKSTIGGNDFWVVKLKDKAKVEKVK
ASIEAIPNPAVTYTNVIIGYDFTEGTASVIDILGRILQQFSINSRTVPVDLSHYAEGIYIIKIKTDVKTESVKVIKTVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61201; Mature: 61201

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMILMLMKKNYLLFFILLSFLTYSQDILWEKSYGGIHADYLFDAQPTADYGFILAGSSLS
CEEEEEECCCHHHHHHHHHHHHCCHHHEEECCCCCEEEEEEECCCCCCCCEEEEECCCCC
NKTGNKDEDNHGDLDYWIWKMNEKGELDWQKSIGGNGFDLLQSIKGTRDGGFILAGTSSS
CCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHCCCCHHHHHHHHCCCCCCCEEEEECCCC
GNSFQKKDNCKGLTDFWVIKLDASGEEQWQRTIGGDGQDELLCAFQTKDGGYILGGSSSS
CCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCC
SPSSVTNIKAEGKMDAFPQTDLYSKSEKSRGNMDYWIVKLDKEGVIEWQKTYGGKYADVL
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEHHHCCCHHHHHH
RSMEQTADNGYILAGYSNSPVSGDKADANKGVGDYWIIKIDDSGAVQWQSSYGGDGDDQP
HHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCC
YVIHQTADGGYILGGNSNSTNPLTTLGGIVSNGTDFWILRLDHEGGVVWSKTYDFGKVDI
EEEEEECCCCEEECCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCHHHH
LTSLVENNDNTYLIGGYAKSEAKQSLLGDAAKKAGTGKDKEGINDYIALKIDEKGEELWK
HHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHH
KTVGSAGEDILRKLIETRDGGYLMAGTSNSGSSKDKKSTIGGNDFWVVKLKDKAKVEKVK
HHHCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHH
ASIEAIPNPAVTYTNVIIGYDFTEGTASVIDILGRILQQFSINSRTVPVDLSHYAEGIYI
HHHHHCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCEEE
IKIKTDVKTESVKVIKTVR
EEEECCCCCCCEEEEEECC
>Mature Secondary Structure
MMILMLMKKNYLLFFILLSFLTYSQDILWEKSYGGIHADYLFDAQPTADYGFILAGSSLS
CEEEEEECCCHHHHHHHHHHHHCCHHHEEECCCCCEEEEEEECCCCCCCCEEEEECCCCC
NKTGNKDEDNHGDLDYWIWKMNEKGELDWQKSIGGNGFDLLQSIKGTRDGGFILAGTSSS
CCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHCCCCHHHHHHHHCCCCCCCEEEEECCCC
GNSFQKKDNCKGLTDFWVIKLDASGEEQWQRTIGGDGQDELLCAFQTKDGGYILGGSSSS
CCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCC
SPSSVTNIKAEGKMDAFPQTDLYSKSEKSRGNMDYWIVKLDKEGVIEWQKTYGGKYADVL
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEHHHCCCHHHHHH
RSMEQTADNGYILAGYSNSPVSGDKADANKGVGDYWIIKIDDSGAVQWQSSYGGDGDDQP
HHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCC
YVIHQTADGGYILGGNSNSTNPLTTLGGIVSNGTDFWILRLDHEGGVVWSKTYDFGKVDI
EEEEEECCCCEEECCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCHHHH
LTSLVENNDNTYLIGGYAKSEAKQSLLGDAAKKAGTGKDKEGINDYIALKIDEKGEELWK
HHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHH
KTVGSAGEDILRKLIETRDGGYLMAGTSNSGSSKDKKSTIGGNDFWVVKLKDKAKVEKVK
HHHCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHH
ASIEAIPNPAVTYTNVIIGYDFTEGTASVIDILGRILQQFSINSRTVPVDLSHYAEGIYI
HHHHHCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCEEE
IKIKTDVKTESVKVIKTVR
EEEECCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA