| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300417
Identifier: 146300417
GI number: 146300417
Start: 3169433
End: 3171112
Strand: Direct
Name: 146300417
Synonym: Fjoh_2666
Alternate gene names: NA
Gene position: 3169433-3171112 (Clockwise)
Preceding gene: 146300414
Following gene: 146300418
Centisome position: 51.98
GC content: 37.92
Gene sequence:
>1680_bases ATGATGATCCTAATGCTTATGAAAAAAAACTACCTCTTATTTTTTATTTTATTGTCGTTTTTAACTTACTCACAAGATAT TCTTTGGGAAAAGTCTTATGGCGGCATTCATGCAGATTACCTTTTTGATGCACAGCCTACAGCCGACTATGGGTTTATTC TGGCTGGCAGCTCCCTTTCTAACAAAACCGGAAATAAAGACGAAGATAATCATGGAGATCTTGATTATTGGATCTGGAAA ATGAATGAAAAAGGAGAACTCGACTGGCAGAAAAGTATTGGAGGAAATGGATTTGATCTTCTTCAAAGTATAAAAGGAAC CAGAGACGGAGGTTTTATTCTGGCAGGAACTTCAAGTTCAGGAAACAGTTTTCAGAAAAAAGACAATTGTAAAGGCCTTA CTGATTTTTGGGTTATCAAACTAGACGCTTCCGGTGAAGAGCAATGGCAGAGAACTATTGGCGGTGATGGTCAGGATGAA CTTTTATGTGCTTTCCAGACCAAAGACGGCGGTTATATTTTAGGCGGCTCATCGAGCTCAAGCCCTTCTTCTGTTACAAA TATTAAGGCAGAAGGAAAAATGGACGCTTTTCCTCAAACAGATTTATACAGCAAATCAGAAAAAAGCCGTGGTAATATGG ATTACTGGATCGTAAAACTCGATAAAGAAGGAGTTATCGAGTGGCAGAAAACTTACGGTGGTAAATATGCTGATGTATTA AGAAGCATGGAACAAACAGCTGATAACGGCTATATTTTGGCAGGATATTCAAATTCACCTGTTTCAGGAGATAAAGCTGA CGCTAATAAGGGAGTGGGTGATTACTGGATTATTAAAATAGATGACTCAGGTGCTGTTCAATGGCAGTCATCGTATGGAG GAGATGGCGATGACCAGCCTTATGTAATTCATCAAACGGCAGATGGCGGCTATATTCTGGGAGGCAATTCCAACAGTACA AATCCTTTGACCACCCTTGGAGGAATCGTAAGTAATGGAACTGATTTTTGGATTTTGAGACTAGACCACGAAGGAGGAGT TGTATGGAGTAAAACTTATGATTTTGGAAAAGTAGATATTTTAACTTCCCTTGTAGAAAATAATGATAACACTTATTTAA TTGGAGGTTACGCAAAATCTGAAGCTAAGCAGTCTTTGCTTGGAGATGCCGCTAAAAAAGCCGGGACTGGAAAGGATAAG GAAGGAATTAATGATTATATCGCATTAAAGATAGATGAAAAAGGAGAAGAATTATGGAAGAAAACCGTTGGGAGTGCCGG AGAAGATATTCTGCGAAAACTTATAGAAACCAGAGACGGAGGCTATTTAATGGCGGGAACATCAAATTCAGGTTCTTCAA AAGATAAAAAATCAACCATAGGAGGAAATGATTTTTGGGTTGTGAAGCTGAAAGATAAGGCTAAAGTTGAAAAAGTAAAA GCAAGTATTGAGGCTATTCCAAATCCTGCTGTTACTTACACCAACGTAATTATAGGCTATGATTTTACAGAAGGAACAGC TTCGGTCATTGATATTTTAGGCAGGATTTTACAACAGTTCAGTATCAACAGCAGAACCGTTCCTGTTGACTTAAGTCATT ATGCAGAGGGAATTTATATCATTAAAATTAAGACTGATGTAAAAACAGAGTCAGTTAAAGTAATTAAAACCGTACGATAG
Upstream 100 bases:
>100_bases TTCTGCGTTTTTTCACAGTTGAACAAATAAATATCATGTTAAAAAAAAGGATAATATTTTAGTGGATGTTCCTTATAAAT TTGCCTGTAAAATTTATATA
Downstream 100 bases:
>100_bases AAAATGTTTAAAATAAACTACAATTTAAAAGGCTTAATTAGTATTTTTCTTTTTATGCTGATGTCCACGCTTACTTATGG GCAGACAGAAAATGATCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 559; Mature: 559
Protein sequence:
>559_residues MMILMLMKKNYLLFFILLSFLTYSQDILWEKSYGGIHADYLFDAQPTADYGFILAGSSLSNKTGNKDEDNHGDLDYWIWK MNEKGELDWQKSIGGNGFDLLQSIKGTRDGGFILAGTSSSGNSFQKKDNCKGLTDFWVIKLDASGEEQWQRTIGGDGQDE LLCAFQTKDGGYILGGSSSSSPSSVTNIKAEGKMDAFPQTDLYSKSEKSRGNMDYWIVKLDKEGVIEWQKTYGGKYADVL RSMEQTADNGYILAGYSNSPVSGDKADANKGVGDYWIIKIDDSGAVQWQSSYGGDGDDQPYVIHQTADGGYILGGNSNST NPLTTLGGIVSNGTDFWILRLDHEGGVVWSKTYDFGKVDILTSLVENNDNTYLIGGYAKSEAKQSLLGDAAKKAGTGKDK EGINDYIALKIDEKGEELWKKTVGSAGEDILRKLIETRDGGYLMAGTSNSGSSKDKKSTIGGNDFWVVKLKDKAKVEKVK ASIEAIPNPAVTYTNVIIGYDFTEGTASVIDILGRILQQFSINSRTVPVDLSHYAEGIYIIKIKTDVKTESVKVIKTVR
Sequences:
>Translated_559_residues MMILMLMKKNYLLFFILLSFLTYSQDILWEKSYGGIHADYLFDAQPTADYGFILAGSSLSNKTGNKDEDNHGDLDYWIWK MNEKGELDWQKSIGGNGFDLLQSIKGTRDGGFILAGTSSSGNSFQKKDNCKGLTDFWVIKLDASGEEQWQRTIGGDGQDE LLCAFQTKDGGYILGGSSSSSPSSVTNIKAEGKMDAFPQTDLYSKSEKSRGNMDYWIVKLDKEGVIEWQKTYGGKYADVL RSMEQTADNGYILAGYSNSPVSGDKADANKGVGDYWIIKIDDSGAVQWQSSYGGDGDDQPYVIHQTADGGYILGGNSNST NPLTTLGGIVSNGTDFWILRLDHEGGVVWSKTYDFGKVDILTSLVENNDNTYLIGGYAKSEAKQSLLGDAAKKAGTGKDK EGINDYIALKIDEKGEELWKKTVGSAGEDILRKLIETRDGGYLMAGTSNSGSSKDKKSTIGGNDFWVVKLKDKAKVEKVK ASIEAIPNPAVTYTNVIIGYDFTEGTASVIDILGRILQQFSINSRTVPVDLSHYAEGIYIIKIKTDVKTESVKVIKTVR >Mature_559_residues MMILMLMKKNYLLFFILLSFLTYSQDILWEKSYGGIHADYLFDAQPTADYGFILAGSSLSNKTGNKDEDNHGDLDYWIWK MNEKGELDWQKSIGGNGFDLLQSIKGTRDGGFILAGTSSSGNSFQKKDNCKGLTDFWVIKLDASGEEQWQRTIGGDGQDE LLCAFQTKDGGYILGGSSSSSPSSVTNIKAEGKMDAFPQTDLYSKSEKSRGNMDYWIVKLDKEGVIEWQKTYGGKYADVL RSMEQTADNGYILAGYSNSPVSGDKADANKGVGDYWIIKIDDSGAVQWQSSYGGDGDDQPYVIHQTADGGYILGGNSNST NPLTTLGGIVSNGTDFWILRLDHEGGVVWSKTYDFGKVDILTSLVENNDNTYLIGGYAKSEAKQSLLGDAAKKAGTGKDK EGINDYIALKIDEKGEELWKKTVGSAGEDILRKLIETRDGGYLMAGTSNSGSSKDKKSTIGGNDFWVVKLKDKAKVEKVK ASIEAIPNPAVTYTNVIIGYDFTEGTASVIDILGRILQQFSINSRTVPVDLSHYAEGIYIIKIKTDVKTESVKVIKTVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61201; Mature: 61201
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMILMLMKKNYLLFFILLSFLTYSQDILWEKSYGGIHADYLFDAQPTADYGFILAGSSLS CEEEEEECCCHHHHHHHHHHHHCCHHHEEECCCCCEEEEEEECCCCCCCCEEEEECCCCC NKTGNKDEDNHGDLDYWIWKMNEKGELDWQKSIGGNGFDLLQSIKGTRDGGFILAGTSSS CCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHCCCCHHHHHHHHCCCCCCCEEEEECCCC GNSFQKKDNCKGLTDFWVIKLDASGEEQWQRTIGGDGQDELLCAFQTKDGGYILGGSSSS CCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCC SPSSVTNIKAEGKMDAFPQTDLYSKSEKSRGNMDYWIVKLDKEGVIEWQKTYGGKYADVL CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEHHHCCCHHHHHH RSMEQTADNGYILAGYSNSPVSGDKADANKGVGDYWIIKIDDSGAVQWQSSYGGDGDDQP HHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCC YVIHQTADGGYILGGNSNSTNPLTTLGGIVSNGTDFWILRLDHEGGVVWSKTYDFGKVDI EEEEEECCCCEEECCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCHHHH LTSLVENNDNTYLIGGYAKSEAKQSLLGDAAKKAGTGKDKEGINDYIALKIDEKGEELWK HHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHH KTVGSAGEDILRKLIETRDGGYLMAGTSNSGSSKDKKSTIGGNDFWVVKLKDKAKVEKVK HHHCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHH ASIEAIPNPAVTYTNVIIGYDFTEGTASVIDILGRILQQFSINSRTVPVDLSHYAEGIYI HHHHHCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCEEE IKIKTDVKTESVKVIKTVR EEEECCCCCCCEEEEEECC >Mature Secondary Structure MMILMLMKKNYLLFFILLSFLTYSQDILWEKSYGGIHADYLFDAQPTADYGFILAGSSLS CEEEEEECCCHHHHHHHHHHHHCCHHHEEECCCCCEEEEEEECCCCCCCCEEEEECCCCC NKTGNKDEDNHGDLDYWIWKMNEKGELDWQKSIGGNGFDLLQSIKGTRDGGFILAGTSSS CCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHCCCCHHHHHHHHCCCCCCCEEEEECCCC GNSFQKKDNCKGLTDFWVIKLDASGEEQWQRTIGGDGQDELLCAFQTKDGGYILGGSSSS CCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCC SPSSVTNIKAEGKMDAFPQTDLYSKSEKSRGNMDYWIVKLDKEGVIEWQKTYGGKYADVL CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEHHHCCCHHHHHH RSMEQTADNGYILAGYSNSPVSGDKADANKGVGDYWIIKIDDSGAVQWQSSYGGDGDDQP HHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCC YVIHQTADGGYILGGNSNSTNPLTTLGGIVSNGTDFWILRLDHEGGVVWSKTYDFGKVDI EEEEEECCCCEEECCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCHHHH LTSLVENNDNTYLIGGYAKSEAKQSLLGDAAKKAGTGKDKEGINDYIALKIDEKGEELWK HHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHH KTVGSAGEDILRKLIETRDGGYLMAGTSNSGSSKDKKSTIGGNDFWVVKLKDKAKVEKVK HHHCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHH ASIEAIPNPAVTYTNVIIGYDFTEGTASVIDILGRILQQFSINSRTVPVDLSHYAEGIYI HHHHHCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCEEE IKIKTDVKTESVKVIKTVR EEEECCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA