Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300414

Identifier: 146300414

GI number: 146300414

Start: 3165264

End: 3166364

Strand: Direct

Name: 146300414

Synonym: Fjoh_2662

Alternate gene names: NA

Gene position: 3165264-3166364 (Clockwise)

Preceding gene: 146300413

Following gene: 146300417

Centisome position: 51.92

GC content: 48.14

Gene sequence:

>1101_bases
ATGATAGAGTATATTCCTTATAGTGATTCGATCGAAGTTATACAGCCCGATGAGCTTGAAATAAGCCGGAAGATCGTGGA
TTCGATGGCAAGGGTTAACCGCCTGATGTACGAGAAATACCGACATGCCATACGCGATGCGCATGCCAAAAGCCATGCTG
TATTGAAAGGCGAGCTTAAGGTATATGATAACCTGCCCGAACATCTGGCACAGGGGTTGTTTGCAAAGGCCAGAACCTAT
CCTGTTATTGTGCGTTTATCAACGGCGCAGGGCTCCATCGTACCCGATAAAATGTCAGCATTCAGGGGTATGGCCATAAA
AGTAATCGGAGTGGAAGGAGAAAAGCTGCTGCCAGAACTCTCAGACGCTGTGACCCAGGACTTTCTTATGGTAAATTATC
CTGTCATTCCAACCGGAACGATAAAGGAATACCTCAAGATGCAGGAGGGGCTGGAAAAGCAGGCCGACAGCGGGGAGCTC
TTTCAGGAAATCGCGCAGAAGGCCGCTGTCGGGGTGCAGAATGTACTTGCCGCAGTAGGTCTTGCTGATGATACCAATCA
ATTGAGCGCACCGGGACCGCATATCCTTGGGGATACTTATTTCAGTATGGCAGCGCTGCGTTTTGGGGATTATGTAGCCA
AAATAAATGTAAAGCCGCTTTCGGATAATGTAAAGGAATTAGCGGGGAAGAAAATTGATAAGGATATTATCGACGAAGAT
GAGCACGCTTTTTTAACAAAAATTGTTGCTGATTTTTTCCAGTCTGCTACAGCGGAATATGAAATCGGCGCACAGCTCTG
CACCGATTTAGAACTGATGCCGGTGGAAGACGGATCCGTGCAGTGGCCCGAGGACCAGAGTCCTTATCAGCCTGTTGGTA
AAATTACTTTTCATCCGCAGCAAACTTTCAGTCCCGAGCGCCGTGTGTATGCAGACGACACGTTGAGTTTTAATCCGTTT
CACTGCCTGGCTGATCACCGCCCGCTGGGCAATATTATGCGCGTGAGACAACTGGCCTATGAAACTTCAAGCCGCTACAG
GCACCATATGAATGCTAAGGCAAGGATAGAACCAGTCAGCATTGACCAGCTGCCAGATTAA

Upstream 100 bases:

>100_bases
CGGAAGGAAATAATGTTCCATCGAAAAAATTCTCGCTGCAGCAGGCTGTATTTAATCCTGTGAAAAAATAAAAGATTAAA
AAAACAATAACATACCATAC

Downstream 100 bases:

>100_bases
TTGCCGCCCCGTAAAATAATAGATTAAAAAAGCCTGCGAGATGATTGCATCACGCAGGCTTATATACTTTGGTCATCCTC
GGAAAAAGTAATATCTTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MIEYIPYSDSIEVIQPDELEISRKIVDSMARVNRLMYEKYRHAIRDAHAKSHAVLKGELKVYDNLPEHLAQGLFAKARTY
PVIVRLSTAQGSIVPDKMSAFRGMAIKVIGVEGEKLLPELSDAVTQDFLMVNYPVIPTGTIKEYLKMQEGLEKQADSGEL
FQEIAQKAAVGVQNVLAAVGLADDTNQLSAPGPHILGDTYFSMAALRFGDYVAKINVKPLSDNVKELAGKKIDKDIIDED
EHAFLTKIVADFFQSATAEYEIGAQLCTDLELMPVEDGSVQWPEDQSPYQPVGKITFHPQQTFSPERRVYADDTLSFNPF
HCLADHRPLGNIMRVRQLAYETSSRYRHHMNAKARIEPVSIDQLPD

Sequences:

>Translated_366_residues
MIEYIPYSDSIEVIQPDELEISRKIVDSMARVNRLMYEKYRHAIRDAHAKSHAVLKGELKVYDNLPEHLAQGLFAKARTY
PVIVRLSTAQGSIVPDKMSAFRGMAIKVIGVEGEKLLPELSDAVTQDFLMVNYPVIPTGTIKEYLKMQEGLEKQADSGEL
FQEIAQKAAVGVQNVLAAVGLADDTNQLSAPGPHILGDTYFSMAALRFGDYVAKINVKPLSDNVKELAGKKIDKDIIDED
EHAFLTKIVADFFQSATAEYEIGAQLCTDLELMPVEDGSVQWPEDQSPYQPVGKITFHPQQTFSPERRVYADDTLSFNPF
HCLADHRPLGNIMRVRQLAYETSSRYRHHMNAKARIEPVSIDQLPD
>Mature_366_residues
MIEYIPYSDSIEVIQPDELEISRKIVDSMARVNRLMYEKYRHAIRDAHAKSHAVLKGELKVYDNLPEHLAQGLFAKARTY
PVIVRLSTAQGSIVPDKMSAFRGMAIKVIGVEGEKLLPELSDAVTQDFLMVNYPVIPTGTIKEYLKMQEGLEKQADSGEL
FQEIAQKAAVGVQNVLAAVGLADDTNQLSAPGPHILGDTYFSMAALRFGDYVAKINVKPLSDNVKELAGKKIDKDIIDED
EHAFLTKIVADFFQSATAEYEIGAQLCTDLELMPVEDGSVQWPEDQSPYQPVGKITFHPQQTFSPERRVYADDTLSFNPF
HCLADHRPLGNIMRVRQLAYETSSRYRHHMNAKARIEPVSIDQLPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020835
- InterPro:   IPR018028
- InterPro:   IPR011614 [H]

Pfam domain/function: PF00199 Catalase [H]

EC number: NA

Molecular weight: Translated: 41036; Mature: 41036

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEYIPYSDSIEVIQPDELEISRKIVDSMARVNRLMYEKYRHAIRDAHAKSHAVLKGELK
CCEECCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHH
VYDNLPEHLAQGLFAKARTYPVIVRLSTAQGSIVPDKMSAFRGMAIKVIGVEGEKLLPEL
HHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHCCCEEEEEECCCHHHHHHH
SDAVTQDFLMVNYPVIPTGTIKEYLKMQEGLEKQADSGELFQEIAQKAAVGVQNVLAAVG
HHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
LADDTNQLSAPGPHILGDTYFSMAALRFGDYVAKINVKPLSDNVKELAGKKIDKDIIDED
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHCCCCCHHHCCCC
EHAFLTKIVADFFQSATAEYEIGAQLCTDLELMPVEDGSVQWPEDQSPYQPVGKITFHPQ
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCC
QTFSPERRVYADDTLSFNPFHCLADHRPLGNIMRVRQLAYETSSRYRHHMNAKARIEPVS
CCCCCCCCEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC
IDQLPD
CCCCCC
>Mature Secondary Structure
MIEYIPYSDSIEVIQPDELEISRKIVDSMARVNRLMYEKYRHAIRDAHAKSHAVLKGELK
CCEECCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHH
VYDNLPEHLAQGLFAKARTYPVIVRLSTAQGSIVPDKMSAFRGMAIKVIGVEGEKLLPEL
HHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHCCCEEEEEECCCHHHHHHH
SDAVTQDFLMVNYPVIPTGTIKEYLKMQEGLEKQADSGELFQEIAQKAAVGVQNVLAAVG
HHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
LADDTNQLSAPGPHILGDTYFSMAALRFGDYVAKINVKPLSDNVKELAGKKIDKDIIDED
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHCCCCCHHHCCCC
EHAFLTKIVADFFQSATAEYEIGAQLCTDLELMPVEDGSVQWPEDQSPYQPVGKITFHPQ
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCC
QTFSPERRVYADDTLSFNPFHCLADHRPLGNIMRVRQLAYETSSRYRHHMNAKARIEPVS
CCCCCCCCEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC
IDQLPD
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]