| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146300412
Identifier: 146300412
GI number: 146300412
Start: 3163106
End: 3164272
Strand: Direct
Name: 146300412
Synonym: Fjoh_2660
Alternate gene names: NA
Gene position: 3163106-3164272 (Clockwise)
Preceding gene: 146300411
Following gene: 146300413
Centisome position: 51.88
GC content: 48.67
Gene sequence:
>1167_bases ATGAAAACGAAATACCAATTTACTGCATTTCTATGTGTGATGGGGCTGCTTTCCTACGGCCAGAAAGGCATACCTCCTAA AGAAGATACCAAGAAAGTGACCATTACCAATTTCCCTACCCATCTTGAGTACAGTTCCTCACTCTCATCGAGCCTTAAAA CGGCAAATGGATGGCAGGCGACCCCTGCCGCGATGGGACTTGGAAAACCAAGGATGCTGTACATCGGCAAAAAAGGCCAG CTCTATGTTACAAGACGCGATGCGGGAGATGTGCTGATGCTGACCGATACCAACAACGACGGCAGGTTTGACGATATGAC CCGTGTAGCTGATTTTCCAGGAGTACATGGCATTACGGCCAAAGATGATTTTATGTACCTGTGCAATAACAACAAAGTAC TTAGATATGCATTAAATGCTGATGGAACTTTGGGCAAGGCCGCCGATACGCTGATTAAAGATCTGCCGAGCGGCGGGCAG CATGCGAACCGCACGATGGATTTCGGGCCTGACGGCAAATTGTATATCTCAGTGGGAAGCGTCTGCAACGACTGTAAGGA AAGCGATAAGGAAACTGCCGCCATGCTGCAGGTGGATCCGCAGACTTGGAAAAGAACGCTTTATGCGTCAGGGCTTCGAA ATACCATCGGTTTTGACTGGCAGCCTCAGACCAAAGAAATGTGGGGTGTGGACAACGGCGGAGACACTAAAGGAGACGAC TGGCCTCCCGAAGAATTAAATAAGATTATTATGGGAGGCAATTACGGATTTCCTTTCGCCTACGGCAAGAAGGAAGTGGA CCAGAGCAGGGAAGACCCTGTGGGCAATACCAAGGAGGGCTGGGTCAAACCAACTCAGGCATCTATACTGGATTTCCCGG CGCACAGCGCCCCTATTGCTTTTGCATTTTTCGACAGCGGTAAAAATAAAGGAGATGCACTGGTGTGCTGGCACGGCTCA TGGAACAGGCAAAATCCGAGCGGTTACAAAGTGGAACGCATCAAATTTGACAGCAAGGGCAATCCCACAGGGTCTGAAGA TTTCTTAACGGGATTTTTAATCGGCAGCGAACGGTTCGGCAGACCCGCAGGACTGGCGGTCGGTTCTGATGTGGTTTATA TATCAGATGATGCAAATGGTATTATTTACGCACTCAAACAAAAATAA
Upstream 100 bases:
>100_bases TTACAATTTATTGATAATACTTTTGGATACGCAAATCCAGATCAATATTCTCATTTTAAAGTATTTGATCAGCTATTAAG AACTAATTAATTTACGCTAT
Downstream 100 bases:
>100_bases AGATGAAAAAATATATTATACTACTGTTAGCTGCCCAGTTAACGTGGGCTCAGCAGCCAACAAAACGCATTGAATTTGAA GCGCCTGAAAGTTATCCCGA
Product: glucose/sorbosone dehydrogenase-like protein
Products: NA
Alternate protein names: SNDH [H]
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MKTKYQFTAFLCVMGLLSYGQKGIPPKEDTKKVTITNFPTHLEYSSSLSSSLKTANGWQATPAAMGLGKPRMLYIGKKGQ LYVTRRDAGDVLMLTDTNNDGRFDDMTRVADFPGVHGITAKDDFMYLCNNNKVLRYALNADGTLGKAADTLIKDLPSGGQ HANRTMDFGPDGKLYISVGSVCNDCKESDKETAAMLQVDPQTWKRTLYASGLRNTIGFDWQPQTKEMWGVDNGGDTKGDD WPPEELNKIIMGGNYGFPFAYGKKEVDQSREDPVGNTKEGWVKPTQASILDFPAHSAPIAFAFFDSGKNKGDALVCWHGS WNRQNPSGYKVERIKFDSKGNPTGSEDFLTGFLIGSERFGRPAGLAVGSDVVYISDDANGIIYALKQK
Sequences:
>Translated_388_residues MKTKYQFTAFLCVMGLLSYGQKGIPPKEDTKKVTITNFPTHLEYSSSLSSSLKTANGWQATPAAMGLGKPRMLYIGKKGQ LYVTRRDAGDVLMLTDTNNDGRFDDMTRVADFPGVHGITAKDDFMYLCNNNKVLRYALNADGTLGKAADTLIKDLPSGGQ HANRTMDFGPDGKLYISVGSVCNDCKESDKETAAMLQVDPQTWKRTLYASGLRNTIGFDWQPQTKEMWGVDNGGDTKGDD WPPEELNKIIMGGNYGFPFAYGKKEVDQSREDPVGNTKEGWVKPTQASILDFPAHSAPIAFAFFDSGKNKGDALVCWHGS WNRQNPSGYKVERIKFDSKGNPTGSEDFLTGFLIGSERFGRPAGLAVGSDVVYISDDANGIIYALKQK >Mature_388_residues MKTKYQFTAFLCVMGLLSYGQKGIPPKEDTKKVTITNFPTHLEYSSSLSSSLKTANGWQATPAAMGLGKPRMLYIGKKGQ LYVTRRDAGDVLMLTDTNNDGRFDDMTRVADFPGVHGITAKDDFMYLCNNNKVLRYALNADGTLGKAADTLIKDLPSGGQ HANRTMDFGPDGKLYISVGSVCNDCKESDKETAAMLQVDPQTWKRTLYASGLRNTIGFDWQPQTKEMWGVDNGGDTKGDD WPPEELNKIIMGGNYGFPFAYGKKEVDQSREDPVGNTKEGWVKPTQASILDFPAHSAPIAFAFFDSGKNKGDALVCWHGS WNRQNPSGYKVERIKFDSKGNPTGSEDFLTGFLIGSERFGRPAGLAVGSDVVYISDDANGIIYALKQK
Specific function: Converts L-sorbosone into 2-keto-L-gulonic acid (2KGA) [H]
COG id: COG2133
COG function: function code G; Glucose/sorbosone dehydrogenases
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.burgdorferi BB024 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR012938 - InterPro: IPR011041 [H]
Pfam domain/function: PF07995 GSDH [H]
EC number: NA
Molecular weight: Translated: 42607; Mature: 42607
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKYQFTAFLCVMGLLSYGQKGIPPKEDTKKVTITNFPTHLEYSSSLSSSLKTANGWQA CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEHHHHHHHHHHCCCCCCC TPAAMGLGKPRMLYIGKKGQLYVTRRDAGDVLMLTDTNNDGRFDDMTRVADFPGVHGITA CHHHHCCCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCC KDDFMYLCNNNKVLRYALNADGTLGKAADTLIKDLPSGGQHANRTMDFGPDGKLYISVGS CCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECH VCNDCKESDKETAAMLQVDPQTWKRTLYASGLRNTIGFDWQPQTKEMWGVDNGGDTKGDD HHHHHHHCCCCEEEEEEECHHHHHHHHHHHCCHHHCCCCCCCCCHHHCCCCCCCCCCCCC WPPEELNKIIMGGNYGFPFAYGKKEVDQSREDPVGNTKEGWVKPTQASILDFPAHSAPIA CCHHHHCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHEEECCCCCCCEE FAFFDSGKNKGDALVCWHGSWNRQNPSGYKVERIKFDSKGNPTGSEDFLTGFLIGSERFG EEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCHHHEEEEEECCHHCC RPAGLAVGSDVVYISDDANGIIYALKQK CCCCEEECCEEEEEECCCCEEEEEEECC >Mature Secondary Structure MKTKYQFTAFLCVMGLLSYGQKGIPPKEDTKKVTITNFPTHLEYSSSLSSSLKTANGWQA CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEHHHHHHHHHHCCCCCCC TPAAMGLGKPRMLYIGKKGQLYVTRRDAGDVLMLTDTNNDGRFDDMTRVADFPGVHGITA CHHHHCCCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCC KDDFMYLCNNNKVLRYALNADGTLGKAADTLIKDLPSGGQHANRTMDFGPDGKLYISVGS CCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECH VCNDCKESDKETAAMLQVDPQTWKRTLYASGLRNTIGFDWQPQTKEMWGVDNGGDTKGDD HHHHHHHCCCCEEEEEEECHHHHHHHHHHHCCHHHCCCCCCCCCHHHCCCCCCCCCCCCC WPPEELNKIIMGGNYGFPFAYGKKEVDQSREDPVGNTKEGWVKPTQASILDFPAHSAPIA CCHHHHCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHEEECCCCCCCEE FAFFDSGKNKGDALVCWHGSWNRQNPSGYKVERIKFDSKGNPTGSEDFLTGFLIGSERFG EEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCHHHEEEEEECCHHCC RPAGLAVGSDVVYISDDANGIIYALKQK CCCCEEECCEEEEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7574579 [H]