Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300412

Identifier: 146300412

GI number: 146300412

Start: 3163106

End: 3164272

Strand: Direct

Name: 146300412

Synonym: Fjoh_2660

Alternate gene names: NA

Gene position: 3163106-3164272 (Clockwise)

Preceding gene: 146300411

Following gene: 146300413

Centisome position: 51.88

GC content: 48.67

Gene sequence:

>1167_bases
ATGAAAACGAAATACCAATTTACTGCATTTCTATGTGTGATGGGGCTGCTTTCCTACGGCCAGAAAGGCATACCTCCTAA
AGAAGATACCAAGAAAGTGACCATTACCAATTTCCCTACCCATCTTGAGTACAGTTCCTCACTCTCATCGAGCCTTAAAA
CGGCAAATGGATGGCAGGCGACCCCTGCCGCGATGGGACTTGGAAAACCAAGGATGCTGTACATCGGCAAAAAAGGCCAG
CTCTATGTTACAAGACGCGATGCGGGAGATGTGCTGATGCTGACCGATACCAACAACGACGGCAGGTTTGACGATATGAC
CCGTGTAGCTGATTTTCCAGGAGTACATGGCATTACGGCCAAAGATGATTTTATGTACCTGTGCAATAACAACAAAGTAC
TTAGATATGCATTAAATGCTGATGGAACTTTGGGCAAGGCCGCCGATACGCTGATTAAAGATCTGCCGAGCGGCGGGCAG
CATGCGAACCGCACGATGGATTTCGGGCCTGACGGCAAATTGTATATCTCAGTGGGAAGCGTCTGCAACGACTGTAAGGA
AAGCGATAAGGAAACTGCCGCCATGCTGCAGGTGGATCCGCAGACTTGGAAAAGAACGCTTTATGCGTCAGGGCTTCGAA
ATACCATCGGTTTTGACTGGCAGCCTCAGACCAAAGAAATGTGGGGTGTGGACAACGGCGGAGACACTAAAGGAGACGAC
TGGCCTCCCGAAGAATTAAATAAGATTATTATGGGAGGCAATTACGGATTTCCTTTCGCCTACGGCAAGAAGGAAGTGGA
CCAGAGCAGGGAAGACCCTGTGGGCAATACCAAGGAGGGCTGGGTCAAACCAACTCAGGCATCTATACTGGATTTCCCGG
CGCACAGCGCCCCTATTGCTTTTGCATTTTTCGACAGCGGTAAAAATAAAGGAGATGCACTGGTGTGCTGGCACGGCTCA
TGGAACAGGCAAAATCCGAGCGGTTACAAAGTGGAACGCATCAAATTTGACAGCAAGGGCAATCCCACAGGGTCTGAAGA
TTTCTTAACGGGATTTTTAATCGGCAGCGAACGGTTCGGCAGACCCGCAGGACTGGCGGTCGGTTCTGATGTGGTTTATA
TATCAGATGATGCAAATGGTATTATTTACGCACTCAAACAAAAATAA

Upstream 100 bases:

>100_bases
TTACAATTTATTGATAATACTTTTGGATACGCAAATCCAGATCAATATTCTCATTTTAAAGTATTTGATCAGCTATTAAG
AACTAATTAATTTACGCTAT

Downstream 100 bases:

>100_bases
AGATGAAAAAATATATTATACTACTGTTAGCTGCCCAGTTAACGTGGGCTCAGCAGCCAACAAAACGCATTGAATTTGAA
GCGCCTGAAAGTTATCCCGA

Product: glucose/sorbosone dehydrogenase-like protein

Products: NA

Alternate protein names: SNDH [H]

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MKTKYQFTAFLCVMGLLSYGQKGIPPKEDTKKVTITNFPTHLEYSSSLSSSLKTANGWQATPAAMGLGKPRMLYIGKKGQ
LYVTRRDAGDVLMLTDTNNDGRFDDMTRVADFPGVHGITAKDDFMYLCNNNKVLRYALNADGTLGKAADTLIKDLPSGGQ
HANRTMDFGPDGKLYISVGSVCNDCKESDKETAAMLQVDPQTWKRTLYASGLRNTIGFDWQPQTKEMWGVDNGGDTKGDD
WPPEELNKIIMGGNYGFPFAYGKKEVDQSREDPVGNTKEGWVKPTQASILDFPAHSAPIAFAFFDSGKNKGDALVCWHGS
WNRQNPSGYKVERIKFDSKGNPTGSEDFLTGFLIGSERFGRPAGLAVGSDVVYISDDANGIIYALKQK

Sequences:

>Translated_388_residues
MKTKYQFTAFLCVMGLLSYGQKGIPPKEDTKKVTITNFPTHLEYSSSLSSSLKTANGWQATPAAMGLGKPRMLYIGKKGQ
LYVTRRDAGDVLMLTDTNNDGRFDDMTRVADFPGVHGITAKDDFMYLCNNNKVLRYALNADGTLGKAADTLIKDLPSGGQ
HANRTMDFGPDGKLYISVGSVCNDCKESDKETAAMLQVDPQTWKRTLYASGLRNTIGFDWQPQTKEMWGVDNGGDTKGDD
WPPEELNKIIMGGNYGFPFAYGKKEVDQSREDPVGNTKEGWVKPTQASILDFPAHSAPIAFAFFDSGKNKGDALVCWHGS
WNRQNPSGYKVERIKFDSKGNPTGSEDFLTGFLIGSERFGRPAGLAVGSDVVYISDDANGIIYALKQK
>Mature_388_residues
MKTKYQFTAFLCVMGLLSYGQKGIPPKEDTKKVTITNFPTHLEYSSSLSSSLKTANGWQATPAAMGLGKPRMLYIGKKGQ
LYVTRRDAGDVLMLTDTNNDGRFDDMTRVADFPGVHGITAKDDFMYLCNNNKVLRYALNADGTLGKAADTLIKDLPSGGQ
HANRTMDFGPDGKLYISVGSVCNDCKESDKETAAMLQVDPQTWKRTLYASGLRNTIGFDWQPQTKEMWGVDNGGDTKGDD
WPPEELNKIIMGGNYGFPFAYGKKEVDQSREDPVGNTKEGWVKPTQASILDFPAHSAPIAFAFFDSGKNKGDALVCWHGS
WNRQNPSGYKVERIKFDSKGNPTGSEDFLTGFLIGSERFGRPAGLAVGSDVVYISDDANGIIYALKQK

Specific function: Converts L-sorbosone into 2-keto-L-gulonic acid (2KGA) [H]

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.burgdorferi BB024 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 42607; Mature: 42607

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKYQFTAFLCVMGLLSYGQKGIPPKEDTKKVTITNFPTHLEYSSSLSSSLKTANGWQA
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEHHHHHHHHHHCCCCCCC
TPAAMGLGKPRMLYIGKKGQLYVTRRDAGDVLMLTDTNNDGRFDDMTRVADFPGVHGITA
CHHHHCCCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCC
KDDFMYLCNNNKVLRYALNADGTLGKAADTLIKDLPSGGQHANRTMDFGPDGKLYISVGS
CCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECH
VCNDCKESDKETAAMLQVDPQTWKRTLYASGLRNTIGFDWQPQTKEMWGVDNGGDTKGDD
HHHHHHHCCCCEEEEEEECHHHHHHHHHHHCCHHHCCCCCCCCCHHHCCCCCCCCCCCCC
WPPEELNKIIMGGNYGFPFAYGKKEVDQSREDPVGNTKEGWVKPTQASILDFPAHSAPIA
CCHHHHCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHEEECCCCCCCEE
FAFFDSGKNKGDALVCWHGSWNRQNPSGYKVERIKFDSKGNPTGSEDFLTGFLIGSERFG
EEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCHHHEEEEEECCHHCC
RPAGLAVGSDVVYISDDANGIIYALKQK
CCCCEEECCEEEEEECCCCEEEEEEECC
>Mature Secondary Structure
MKTKYQFTAFLCVMGLLSYGQKGIPPKEDTKKVTITNFPTHLEYSSSLSSSLKTANGWQA
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEHHHHHHHHHHCCCCCCC
TPAAMGLGKPRMLYIGKKGQLYVTRRDAGDVLMLTDTNNDGRFDDMTRVADFPGVHGITA
CHHHHCCCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCC
KDDFMYLCNNNKVLRYALNADGTLGKAADTLIKDLPSGGQHANRTMDFGPDGKLYISVGS
CCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECH
VCNDCKESDKETAAMLQVDPQTWKRTLYASGLRNTIGFDWQPQTKEMWGVDNGGDTKGDD
HHHHHHHCCCCEEEEEEECHHHHHHHHHHHCCHHHCCCCCCCCCHHHCCCCCCCCCCCCC
WPPEELNKIIMGGNYGFPFAYGKKEVDQSREDPVGNTKEGWVKPTQASILDFPAHSAPIA
CCHHHHCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHEEECCCCCCCEE
FAFFDSGKNKGDALVCWHGSWNRQNPSGYKVERIKFDSKGNPTGSEDFLTGFLIGSERFG
EEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCHHHEEEEEECCHHCC
RPAGLAVGSDVVYISDDANGIIYALKQK
CCCCEEECCEEEEEECCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7574579 [H]