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The map label for this gene is yciF [H]

Identifier: 146300411

GI number: 146300411

Start: 3161611

End: 3162264

Strand: Direct

Name: yciF [H]

Synonym: Fjoh_2659

Alternate gene names: 146300411

Gene position: 3161611-3162264 (Clockwise)

Preceding gene: 146300410

Following gene: 146300412

Centisome position: 51.86

GC content: 43.12

Gene sequence:

>654_bases
ATGGCAACTACAGCAAAAAAAACTACGGCGGATAAAGCAAAAAGTACGGCATCCAAAAGTACGGCATCCAAAAGTACTGC
ATCAAGAAATACTGCATCAAGAAATACTGCAAAAACAGCATCTAAGAGCGCAGACCGAAAAGTAAAAGCAAAATCGACTG
CTGCCGATGGACTAAGAGAACTATTTGTAGATTCATTGAAAGATATTTACTGGGCAGAAAAAGCCCTGACTAAAGCATTG
CCAAAAATGGCTAAGAACTCGACTTCCGAGAACCTGATAACTGCTATCAACGATCATCTTAGCGTTACAGAGGAACAGGT
TAAGAGACTGGAGCAGGTTTTTTCTTTAATTGGCGAGAAGGCTGCGGCCAAGAAATGCGACGCAATGGAAGGACTTATCA
AGGAAGGAGAAAGCATTATGGAAGAAACCGAAGCAGGACCTGTTCGTGACGCAGGAATCATAGCAGCGTCTCAGAAAATA
GAGCATTACGAGATTGCAACATACGGTACATTGGCAGCTTTTGCTACTACACTTGGCGAAGATGATGCGGTACTGCTGCT
GGAGAAAACATTGGCGGAGGAAAAAGAAGCAGATACACTGCTTACCGAGGCAGCCTATAATACCATCAATTTTGATGCAA
ACGAGGAAGATTAG

Upstream 100 bases:

>100_bases
TTGCTATGAGGTTTGAATACTGTAAGATATAACGGATCATTATGTAAGGCTCTCTGTTGATGGCTTTGTACATTTGGATA
TAATATTAAATTAAAAAATT

Downstream 100 bases:

>100_bases
GCCCAGGTATAATATCACTAATGACGATAATATAAAAGTTGGCCTGTACTGTGAGTACGGGCCTTTTCTATAAGCGTTAC
TAGTATGCAGATTACCTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MATTAKKTTADKAKSTASKSTASKSTASRNTASRNTAKTASKSADRKVKAKSTAADGLRELFVDSLKDIYWAEKALTKAL
PKMAKNSTSENLITAINDHLSVTEEQVKRLEQVFSLIGEKAAAKKCDAMEGLIKEGESIMEETEAGPVRDAGIIAASQKI
EHYEIATYGTLAAFATTLGEDDAVLLLEKTLAEEKEADTLLTEAAYNTINFDANEED

Sequences:

>Translated_217_residues
MATTAKKTTADKAKSTASKSTASKSTASRNTASRNTAKTASKSADRKVKAKSTAADGLRELFVDSLKDIYWAEKALTKAL
PKMAKNSTSENLITAINDHLSVTEEQVKRLEQVFSLIGEKAAAKKCDAMEGLIKEGESIMEETEAGPVRDAGIIAASQKI
EHYEIATYGTLAAFATTLGEDDAVLLLEKTLAEEKEADTLLTEAAYNTINFDANEED
>Mature_216_residues
ATTAKKTTADKAKSTASKSTASKSTASRNTASRNTAKTASKSADRKVKAKSTAADGLRELFVDSLKDIYWAEKALTKALP
KMAKNSTSENLITAINDHLSVTEEQVKRLEQVFSLIGEKAAAKKCDAMEGLIKEGESIMEETEAGPVRDAGIIAASQKIE
HYEIATYGTLAAFATTLGEDDAVLLLEKTLAEEKEADTLLTEAAYNTINFDANEED

Specific function: Unknown

COG id: COG3685

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787512, Length=154, Percent_Identity=48.0519480519481, Blast_Score=133, Evalue=8e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010287
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05974 DUF892 [H]

EC number: NA

Molecular weight: Translated: 23287; Mature: 23156

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTAKKTTADKAKSTASKSTASKSTASRNTASRNTAKTASKSADRKVKAKSTAADGLRE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFVDSLKDIYWAEKALTKALPKMAKNSTSENLITAINDHLSVTEEQVKRLEQVFSLIGEK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAKKCDAMEGLIKEGESIMEETEAGPVRDAGIIAASQKIEHYEIATYGTLAAFATTLGE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
DDAVLLLEKTLAEEKEADTLLTEAAYNTINFDANEED
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
ATTAKKTTADKAKSTASKSTASKSTASRNTASRNTAKTASKSADRKVKAKSTAADGLRE
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFVDSLKDIYWAEKALTKALPKMAKNSTSENLITAINDHLSVTEEQVKRLEQVFSLIGEK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAKKCDAMEGLIKEGESIMEETEAGPVRDAGIIAASQKIEHYEIATYGTLAAFATTLGE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
DDAVLLLEKTLAEEKEADTLLTEAAYNTINFDANEED
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 8455549 [H]