| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300360
Identifier: 146300360
GI number: 146300360
Start: 3099460
End: 3100110
Strand: Direct
Name: 146300360
Synonym: Fjoh_2605
Alternate gene names: NA
Gene position: 3099460-3100110 (Clockwise)
Preceding gene: 146300357
Following gene: 146300361
Centisome position: 50.84
GC content: 36.71
Gene sequence:
>651_bases ATGTATAAAGTTTTTGTAAACGACAAACCACTTTTTTTGACAAATGAAATCTCGAAAGAAACAGATTTCCAATTGTTCTT GTTGGAGAGTATTGATATCGAACAGCTTATAGTTAAAATTTTTCAAAATAAAATTCAAAAAGCCATTTTATATCATCCCG ACGAAAGTGAAATAATGAAAACCCTTAAGGCCAAAATTCCGGTAAATAAAGCGGGCGGAGGCTTTGTGTATAATAAGAAA GGCGAGGTTTTATTTATCTTTAGAAACGGAAAATGGGACCTGCCAAAAGGCGGAATCGAAAAAGGGGAAGACATTGAAGC GACGGCTATGCGTGAGGTAGAGGAGGAGACAGGGGTAAACAAGCTTCGTATTACGAGTAAACTTCAAAAAACCTATCATA TCTTTAAACGTAACGGAAAATACAAACTTAAAATCACACATTGGTTCGAAATGTTTTCTGATTTTGAAGGAACGCCGCAC GGGCAGATTGAAGAAGGAATCGAAAAAGTGGCGTGGTTAAATCCTGAACAGATTAAAGAGGCTTTGACGAACTCTTATGA AAATATCAAGTTGTTGTTTGAGGAGAAAGAAAAACCATTGGAAAAGCTTGCTTCGCCTATTGCGTATCGATCTGGGCCAG AATCTAAATAA
Upstream 100 bases:
>100_bases CCATGTAAAAGGATTTTCTGGATTCAATTTAATTGCATTTATTTGCAAAAGCAATTCAGCTGTTTTTTCGGCAGTATCTT TATTAAAAATCATAGTACAA
Downstream 100 bases:
>100_bases CGAGTAATTTTAAAATAGAAATTTAATATTTCGTGTATTAAAAATCGTACTTTTGTTTGGTAAGCAAAAAATGATTATAA TACGTTTTGATGGTAGGATA
Product: NUDIX hydrolase
Products: NA
Alternate protein names: NUDIX Family Hydrolase; Nudix Hydrolase; AP4A Hydrolase; Hydrolase NUDIX Family; Hydrolase NUDIX Family Protein; Orotate Phosphoribosyltransferase
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MYKVFVNDKPLFLTNEISKETDFQLFLLESIDIEQLIVKIFQNKIQKAILYHPDESEIMKTLKAKIPVNKAGGGFVYNKK GEVLFIFRNGKWDLPKGGIEKGEDIEATAMREVEEETGVNKLRITSKLQKTYHIFKRNGKYKLKITHWFEMFSDFEGTPH GQIEEGIEKVAWLNPEQIKEALTNSYENIKLLFEEKEKPLEKLASPIAYRSGPESK
Sequences:
>Translated_216_residues MYKVFVNDKPLFLTNEISKETDFQLFLLESIDIEQLIVKIFQNKIQKAILYHPDESEIMKTLKAKIPVNKAGGGFVYNKK GEVLFIFRNGKWDLPKGGIEKGEDIEATAMREVEEETGVNKLRITSKLQKTYHIFKRNGKYKLKITHWFEMFSDFEGTPH GQIEEGIEKVAWLNPEQIKEALTNSYENIKLLFEEKEKPLEKLASPIAYRSGPESK >Mature_216_residues MYKVFVNDKPLFLTNEISKETDFQLFLLESIDIEQLIVKIFQNKIQKAILYHPDESEIMKTLKAKIPVNKAGGGFVYNKK GEVLFIFRNGKWDLPKGGIEKGEDIEATAMREVEEETGVNKLRITSKLQKTYHIFKRNGKYKLKITHWFEMFSDFEGTPH GQIEEGIEKVAWLNPEQIKEALTNSYENIKLLFEEKEKPLEKLASPIAYRSGPESK
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25060; Mature: 25060
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKVFVNDKPLFLTNEISKETDFQLFLLESIDIEQLIVKIFQNKIQKAILYHPDESEIMK CEEEEECCCCEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHEECCCHHHHHH TLKAKIPVNKAGGGFVYNKKGEVLFIFRNGKWDLPKGGIEKGEDIEATAMREVEEETGVN HHHHHCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC KLRITSKLQKTYHIFKRNGKYKLKITHWFEMFSDFEGTPHGQIEEGIEKVAWLNPEQIKE HHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHH ALTNSYENIKLLFEEKEKPLEKLASPIAYRSGPESK HHHCCHHHEEHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MYKVFVNDKPLFLTNEISKETDFQLFLLESIDIEQLIVKIFQNKIQKAILYHPDESEIMK CEEEEECCCCEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHEECCCHHHHHH TLKAKIPVNKAGGGFVYNKKGEVLFIFRNGKWDLPKGGIEKGEDIEATAMREVEEETGVN HHHHHCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC KLRITSKLQKTYHIFKRNGKYKLKITHWFEMFSDFEGTPHGQIEEGIEKVAWLNPEQIKE HHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHH ALTNSYENIKLLFEEKEKPLEKLASPIAYRSGPESK HHHCCHHHEEHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA