| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300347
Identifier: 146300347
GI number: 146300347
Start: 3087207
End: 3088856
Strand: Reverse
Name: 146300347
Synonym: Fjoh_2592
Alternate gene names: NA
Gene position: 3088856-3087207 (Counterclockwise)
Preceding gene: 146300349
Following gene: 146300346
Centisome position: 50.66
GC content: 34.0
Gene sequence:
>1650_bases GTGCTTGTTTTAAGCGTCCAATCTACTTTTGCGCAAGCAGCAAAATCAGCAAAAACTGCTCCGAAACAGATTCATGTAGA ACATGCCGATAATTTTGAACGTAACGAACCTTTGGTGCCGGGTGCAGTGCTTTTGAGCGGTAATGTAAAAGTAGATCACG ACGGAATCGTTCTGACTTGTAATAAAGCTTATATTTTTGAAGGAGAAAATTATCTAAAAGCTTTTGGAAATGTACAGCTG GTACAGGGTGATACTTTGTTTTTGAACAGTAAATATGCCGAATACAGTGGTAATTTAAAACAGGCTTTTGCTACCGGAGA TGCTGTTATGACTTCTCCTGACGCTACTTTGCAGACAGATACCATTCATTTTGACCGTAATATTCAGCAGGCTTATTATA ACACAAAAGGAACAATCGTAAACAAAGAAAATACTTTAGTGAGTAAATCTGGAAGATATTTTGCAGCAGAAAAAAAGTTT CAATTCCTGACTGAAGTTACGATTACAAACCCAAAATATGTTATTAAATCAAATCATTTAGATTATTACAGCAATTCTGG ACATACTTATTTACTTGGTCCATCGACTATTACAAGTAAAGCCAATTATATTTATACCGAAAGAGGTTTTTATGACACGA AGAAGAATCTCGCCCATTTTTTACGGAAATCGTATATAAAATATGATGACAGGCTTATTGAAGGCGATAGTTTATATTAC AATCGAAATACCGAATTTGCTTCGGCAACACGAAATGTAAAAATTACCGATTCTATAAATAAAGGTATCGTAAAAGGACA TTATGCCGAAATTTTCAAACTGAAAGATTCGATGTTTGTTACCAAAAGAGCTGTTGCCATTAATTTAGTTGAAAATGACT CGGTTTATATTCACGGAAAAAAACTGATGGTAACCGGAAAAGAAGGCGAACGAATTTTAAGAGCTTTTAATAATGTTCGT TTCTATAAAACGGATATGAGCGGAAAATGCGATTCGATACATTCAAACTCAAAAACGGCATTAACTAAACTAATTGGAAA TCCAATTATCTGGAACGGAGAAAGTCAGATTACCGGAGATATAATGCATTTAATAGGCGATAATAATACCAAGAAATTAG ACTCTTTAAAAGTCCTCAATAACACTTTTATAATATCGAAGGATACCCTCGGAACAGGTTATAATCAGGTCAAGGGCATC AATTTATTTGGGAAGTTTAAAGAAGGAAAACTCCATGATGTCGACGTTATCAAAAATACCGAAGTCGTCTATTTTATGCG GAACGACGATAATGAACTTATCGGGATTAATAAAAATGTGAGCAGTAAAATCAATTTGATTTTAGAAAATAATCTAATTG AAACTATTACTTTCTTTAATAAAGTTGACGGCGATATTTATCCAGAAACCGATTTGCCTGAAAATGCCCGTAAACTGCGT GGTTTTGTCTGGCGCGGAGATGAAAGAATAAAATCGAAAGATGATATTTTTACAGAAGAAGATAATGAACTGAATGAAAA ATTAATAAAAGAAGGCAAAGAACAGGAAGAGAAAAACAAAAATGTTCCGCTGAAAGTAAGGAAAGAAACTTTGAATTACG ACAAGAAAAAACCGGCGCCAAAGACAGAAGCAAAAGATAAAAAGAAGTAG
Upstream 100 bases:
>100_bases AATATAAATTAATGCTAATAACAATCTAAGGTTATATCCTTTTTCATAAATTTGACAAAAATTTAATCACTTGAAGAAAT TACTCTTTTTTATATTTTGC
Downstream 100 bases:
>100_bases TTTATTTTTAGTTTTCAGCCGCAGGCACAGTTTTCAGTTTGTCTAACATTAAGATCTTGCAATTAAAATGTAATCTTAAT TTTAAGCTTACAAACTTGCA
Product: OstA family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 549; Mature: 549
Protein sequence:
>549_residues MLVLSVQSTFAQAAKSAKTAPKQIHVEHADNFERNEPLVPGAVLLSGNVKVDHDGIVLTCNKAYIFEGENYLKAFGNVQL VQGDTLFLNSKYAEYSGNLKQAFATGDAVMTSPDATLQTDTIHFDRNIQQAYYNTKGTIVNKENTLVSKSGRYFAAEKKF QFLTEVTITNPKYVIKSNHLDYYSNSGHTYLLGPSTITSKANYIYTERGFYDTKKNLAHFLRKSYIKYDDRLIEGDSLYY NRNTEFASATRNVKITDSINKGIVKGHYAEIFKLKDSMFVTKRAVAINLVENDSVYIHGKKLMVTGKEGERILRAFNNVR FYKTDMSGKCDSIHSNSKTALTKLIGNPIIWNGESQITGDIMHLIGDNNTKKLDSLKVLNNTFIISKDTLGTGYNQVKGI NLFGKFKEGKLHDVDVIKNTEVVYFMRNDDNELIGINKNVSSKINLILENNLIETITFFNKVDGDIYPETDLPENARKLR GFVWRGDERIKSKDDIFTEEDNELNEKLIKEGKEQEEKNKNVPLKVRKETLNYDKKKPAPKTEAKDKKK
Sequences:
>Translated_549_residues MLVLSVQSTFAQAAKSAKTAPKQIHVEHADNFERNEPLVPGAVLLSGNVKVDHDGIVLTCNKAYIFEGENYLKAFGNVQL VQGDTLFLNSKYAEYSGNLKQAFATGDAVMTSPDATLQTDTIHFDRNIQQAYYNTKGTIVNKENTLVSKSGRYFAAEKKF QFLTEVTITNPKYVIKSNHLDYYSNSGHTYLLGPSTITSKANYIYTERGFYDTKKNLAHFLRKSYIKYDDRLIEGDSLYY NRNTEFASATRNVKITDSINKGIVKGHYAEIFKLKDSMFVTKRAVAINLVENDSVYIHGKKLMVTGKEGERILRAFNNVR FYKTDMSGKCDSIHSNSKTALTKLIGNPIIWNGESQITGDIMHLIGDNNTKKLDSLKVLNNTFIISKDTLGTGYNQVKGI NLFGKFKEGKLHDVDVIKNTEVVYFMRNDDNELIGINKNVSSKINLILENNLIETITFFNKVDGDIYPETDLPENARKLR GFVWRGDERIKSKDDIFTEEDNELNEKLIKEGKEQEEKNKNVPLKVRKETLNYDKKKPAPKTEAKDKKK >Mature_549_residues MLVLSVQSTFAQAAKSAKTAPKQIHVEHADNFERNEPLVPGAVLLSGNVKVDHDGIVLTCNKAYIFEGENYLKAFGNVQL VQGDTLFLNSKYAEYSGNLKQAFATGDAVMTSPDATLQTDTIHFDRNIQQAYYNTKGTIVNKENTLVSKSGRYFAAEKKF QFLTEVTITNPKYVIKSNHLDYYSNSGHTYLLGPSTITSKANYIYTERGFYDTKKNLAHFLRKSYIKYDDRLIEGDSLYY NRNTEFASATRNVKITDSINKGIVKGHYAEIFKLKDSMFVTKRAVAINLVENDSVYIHGKKLMVTGKEGERILRAFNNVR FYKTDMSGKCDSIHSNSKTALTKLIGNPIIWNGESQITGDIMHLIGDNNTKKLDSLKVLNNTFIISKDTLGTGYNQVKGI NLFGKFKEGKLHDVDVIKNTEVVYFMRNDDNELIGINKNVSSKINLILENNLIETITFFNKVDGDIYPETDLPENARKLR GFVWRGDERIKSKDDIFTEEDNELNEKLIKEGKEQEEKNKNVPLKVRKETLNYDKKKPAPKTEAKDKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62309; Mature: 62309
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVLSVQSTFAQAAKSAKTAPKQIHVEHADNFERNEPLVPGAVLLSGNVKVDHDGIVLTC CEEEEEHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEECCEEECCCCEEEEE NKAYIFEGENYLKAFGNVQLVQGDTLFLNSKYAEYSGNLKQAFATGDAVMTSPDATLQTD CCEEEECCCHHHHHCCCEEEEECCEEEEECCHHHHCCCHHHHHCCCCEEEECCCCEEEEE TIHFDRNIQQAYYNTKGTIVNKENTLVSKSGRYFAAEKKFQFLTEVTITNPKYVIKSNHL EEEECCCHHHHHCCCCCEEEECCCCEEECCCCEEEECCCEEEEEEEEECCCEEEEECCCC DYYSNSGHTYLLGPSTITSKANYIYTERGFYDTKKNLAHFLRKSYIKYDDRLIEGDSLYY CEECCCCCEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCEEE NRNTEFASATRNVKITDSINKGIVKGHYAEIFKLKDSMFVTKRAVAINLVENDSVYIHGK ECCCCHHHCCCCEEEEECCCCCCCCCCHHEEEEECCCCEEEEEEEEEEEEECCEEEEECE KLMVTGKEGERILRAFNNVRFYKTDMSGKCDSIHSNSKTALTKLIGNPIIWNGESQITGD EEEEECCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCH IMHLIGDNNTKKLDSLKVLNNTFIISKDTLGTGYNQVKGINLFGKFKEGKLHDVDVIKNT HHEEECCCCCCHHHHEEEECCEEEEECCCCCCCHHHEEEEEEEEECCCCCEEEEEEEECC EVVYFMRNDDNELIGINKNVSSKINLILENNLIETITFFNKVDGDIYPETDLPENARKLR EEEEEEECCCCCEEEECCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCHHHHHHC GFVWRGDERIKSKDDIFTEEDNELNEKLIKEGKEQEEKNKNVPLKVRKETLNYDKKKPAP EEEEECCHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCEEEEHHHCCCCCCCCCC KTEAKDKKK CCCCCCCCC >Mature Secondary Structure MLVLSVQSTFAQAAKSAKTAPKQIHVEHADNFERNEPLVPGAVLLSGNVKVDHDGIVLTC CEEEEEHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEECCEEECCCCEEEEE NKAYIFEGENYLKAFGNVQLVQGDTLFLNSKYAEYSGNLKQAFATGDAVMTSPDATLQTD CCEEEECCCHHHHHCCCEEEEECCEEEEECCHHHHCCCHHHHHCCCCEEEECCCCEEEEE TIHFDRNIQQAYYNTKGTIVNKENTLVSKSGRYFAAEKKFQFLTEVTITNPKYVIKSNHL EEEECCCHHHHHCCCCCEEEECCCCEEECCCCEEEECCCEEEEEEEEECCCEEEEECCCC DYYSNSGHTYLLGPSTITSKANYIYTERGFYDTKKNLAHFLRKSYIKYDDRLIEGDSLYY CEECCCCCEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCEEE NRNTEFASATRNVKITDSINKGIVKGHYAEIFKLKDSMFVTKRAVAINLVENDSVYIHGK ECCCCHHHCCCCEEEEECCCCCCCCCCHHEEEEECCCCEEEEEEEEEEEEECCEEEEECE KLMVTGKEGERILRAFNNVRFYKTDMSGKCDSIHSNSKTALTKLIGNPIIWNGESQITGD EEEEECCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCH IMHLIGDNNTKKLDSLKVLNNTFIISKDTLGTGYNQVKGINLFGKFKEGKLHDVDVIKNT HHEEECCCCCCHHHHEEEECCEEEEECCCCCCCHHHEEEEEEEEECCCCCEEEEEEEECC EVVYFMRNDDNELIGINKNVSSKINLILENNLIETITFFNKVDGDIYPETDLPENARKLR EEEEEEECCCCCEEEECCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCHHHHHHC GFVWRGDERIKSKDDIFTEEDNELNEKLIKEGKEQEEKNKNVPLKVRKETLNYDKKKPAP EEEEECCHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCEEEEHHHCCCCCCCCCC KTEAKDKKK CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA