Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300322

Identifier: 146300322

GI number: 146300322

Start: 3053632

End: 3054201

Strand: Direct

Name: 146300322

Synonym: Fjoh_2567

Alternate gene names: NA

Gene position: 3053632-3054201 (Clockwise)

Preceding gene: 146300320

Following gene: 146300326

Centisome position: 50.09

GC content: 34.21

Gene sequence:

>570_bases
ATGTACAACCTACTACGAAAAAACATTGAAAGGAAAGTTCCGCTCACTGATGAAGAATGGAACATTATTGTTTCAAAAGC
AGAACTTGTAAAATTAAAGAAAAATCAGTTCTTGCAGATTCAGGATTCTCATAACAGTTATGAAGGATTCATTTTAAAAG
GATCGTTTAAAACCTACATCGTAAACGAAAACGGAACAGAAACCGTAATTTTCTTTTCCTTTGAAGACGAATGGATGTGT
GACCTGGAAAGTTTTTACCATCAAAAACCAACGACCTACAACATTAAAGCCATTGAAGACAGCGAAATTTTGGTTATCAG
TAAAATCAAAAAAGCGCAGCTGTTTCAAGAAATTCCAAAAATTATGCAGTTTCACGTTCTTATGATTGAACGTGCTAATG
TTGCCATCCAGCAAAGACTATTGGATGTTCTTAATAAAACTTCGAAACAGCGTTATCTTGATTTTAAAGAGCGTTATCCG
CAAAAGGTAAGTTCGATAAACAATAAGAATTTGTCTTCGTATTTGGGAGTTTCTCACGAGTTTCTTTCGAAGATAAAAAG
GAGGTGCTAA

Upstream 100 bases:

>100_bases
ATGCATGAATAGTGTATTTTTACGTAATCGATTACATTATTTAAGCCCCTAATTAATAATGAATTGAGTAACCACTTTTA
TTCCTTAAACAAAACACAAA

Downstream 100 bases:

>100_bases
GATGTTAAGGTTCAGAGTAACAAAGTGACAAAGGTTTTCTTTAGAGACGCACTGTAGTGCGTCTCACTTTACATGAAAAT
CTCACAATCCCGATAGCTAT

Product: cyclic nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MYNLLRKNIERKVPLTDEEWNIIVSKAELVKLKKNQFLQIQDSHNSYEGFILKGSFKTYIVNENGTETVIFFSFEDEWMC
DLESFYHQKPTTYNIKAIEDSEILVISKIKKAQLFQEIPKIMQFHVLMIERANVAIQQRLLDVLNKTSKQRYLDFKERYP
QKVSSINNKNLSSYLGVSHEFLSKIKRRC

Sequences:

>Translated_189_residues
MYNLLRKNIERKVPLTDEEWNIIVSKAELVKLKKNQFLQIQDSHNSYEGFILKGSFKTYIVNENGTETVIFFSFEDEWMC
DLESFYHQKPTTYNIKAIEDSEILVISKIKKAQLFQEIPKIMQFHVLMIERANVAIQQRLLDVLNKTSKQRYLDFKERYP
QKVSSINNKNLSSYLGVSHEFLSKIKRRC
>Mature_189_residues
MYNLLRKNIERKVPLTDEEWNIIVSKAELVKLKKNQFLQIQDSHNSYEGFILKGSFKTYIVNENGTETVIFFSFEDEWMC
DLESFYHQKPTTYNIKAIEDSEILVISKIKKAQLFQEIPKIMQFHVLMIERANVAIQQRLLDVLNKTSKQRYLDFKERYP
QKVSSINNKNLSSYLGVSHEFLSKIKRRC

Specific function: Unknown

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22450; Mature: 22450

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNLLRKNIERKVPLTDEEWNIIVSKAELVKLKKNQFLQIQDSHNSYEGFILKGSFKTYI
CCHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHCCCCEEEEECCCCCCCEEEEECCEEEEE
VNENGTETVIFFSFEDEWMCDLESFYHQKPTTYNIKAIEDSEILVISKIKKAQLFQEIPK
ECCCCCEEEEEEEECCCHHHHHHHHHCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHH
IMQFHVLMIERANVAIQQRLLDVLNKTSKQRYLDFKERYPQKVSSINNKNLSSYLGVSHE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHCCCHH
FLSKIKRRC
HHHHHHHCC
>Mature Secondary Structure
MYNLLRKNIERKVPLTDEEWNIIVSKAELVKLKKNQFLQIQDSHNSYEGFILKGSFKTYI
CCHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHCCCCEEEEECCCCCCCEEEEECCEEEEE
VNENGTETVIFFSFEDEWMCDLESFYHQKPTTYNIKAIEDSEILVISKIKKAQLFQEIPK
ECCCCCEEEEEEEECCCHHHHHHHHHCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHH
IMQFHVLMIERANVAIQQRLLDVLNKTSKQRYLDFKERYPQKVSSINNKNLSSYLGVSHE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHCCCHH
FLSKIKRRC
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA