| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300265
Identifier: 146300265
GI number: 146300265
Start: 2995068
End: 2996075
Strand: Reverse
Name: 146300265
Synonym: Fjoh_2510
Alternate gene names: NA
Gene position: 2996075-2995068 (Counterclockwise)
Preceding gene: 146300267
Following gene: 146300262
Centisome position: 49.14
GC content: 34.23
Gene sequence:
>1008_bases ATGAAAAAATATGCAAGCCTTATATTTCTGGCGTTTTTGTTAAACGGCTGCGACGATGGTGATCTAACCGTAGACGAAAT CAATTTTGATTCTGTAACTCCTGTAAGCTGTACTACATTTACAGAAAACTCGCTTAGTACTGATCCTACGATAATATATA AGTTAAAAACTCAAGAAGCATTTGTTTTACAGCTGCCTCAAACCAATGGACTTGTAAATAACAATGGAACTGTAACGTAC GACATCGATAACTCAATATACCGAGTTTTATACAGAGCTTATAACGGAGCGGTCGCAAAAGATAATATCTGCGGCACTAT TCCGCCTAGTTCTCCAAATGTTACTGAAGAATGGGTTGGAGCTTCTGGAAAAATAAAAATTGTTTCTTCTCAGGTTCCTA CAACGACAGATGCAAATGATTCATTTCGAATCGAGGCATATAATCATGTTATTACATTTGAAAACATTACTTTTCAAAAA CCATCTGGTCCTCAGGTTCAGGAAATATTTGAGTTTGGTACTTTCAAAACAACTGTTACACCTGCTGATTTAACATTTCA AAATACTGATACTGGAGAAGCTTTTAACTGTCCTGACAATAAAAAAATCTATAATTACAATGCTTCATTTACTTTAACAG TAGAGAATTTAGATCCTGCTTTACTTACTAATGAAGCAACTGCACCGAATCAACCAAGATCTCAAGCAATTACTGCAACA ACCAATAAAGTTGTTTATCGAAATTTTGTAAACGGGTCTGGAAGTATTACTTCTACATATGATTTCTGCGCAGCTCAAAT TCCAAGCTTGCCATTACTAAATCAAACCTGGATTGGTGCTGATACAAGTGAAACAAAAAAAGCAACTATAGAAGTAACTA CAGAAAAAATTGGAGACAAAACATTTATCCATACAGTTGTACTAAAAAATGTAAAACTAACAAAAGACAGCAGTTACTTT CAGTTAGGGAACACTTTTACTTTGGGTAAAATAACAGTAAACTTATAG
Upstream 100 bases:
>100_bases TATACTTTTTTCATTAATGCAAAGTTATAAAATATCAATTGTCTAATCTTAAATATCATTTGCCAAATTTTTCACTATTT TTGGCACAAATAAAACTACA
Downstream 100 bases:
>100_bases TAAAAACAAAAGGATTCACAGCTTTTATTTCTTACAAAAAAAACGTCCGTTTTTCATTTGATTTTTAAATTAAATCAATA CTGAAAAACGGACGTTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MKKYASLIFLAFLLNGCDDGDLTVDEINFDSVTPVSCTTFTENSLSTDPTIIYKLKTQEAFVLQLPQTNGLVNNNGTVTY DIDNSIYRVLYRAYNGAVAKDNICGTIPPSSPNVTEEWVGASGKIKIVSSQVPTTTDANDSFRIEAYNHVITFENITFQK PSGPQVQEIFEFGTFKTTVTPADLTFQNTDTGEAFNCPDNKKIYNYNASFTLTVENLDPALLTNEATAPNQPRSQAITAT TNKVVYRNFVNGSGSITSTYDFCAAQIPSLPLLNQTWIGADTSETKKATIEVTTEKIGDKTFIHTVVLKNVKLTKDSSYF QLGNTFTLGKITVNL
Sequences:
>Translated_335_residues MKKYASLIFLAFLLNGCDDGDLTVDEINFDSVTPVSCTTFTENSLSTDPTIIYKLKTQEAFVLQLPQTNGLVNNNGTVTY DIDNSIYRVLYRAYNGAVAKDNICGTIPPSSPNVTEEWVGASGKIKIVSSQVPTTTDANDSFRIEAYNHVITFENITFQK PSGPQVQEIFEFGTFKTTVTPADLTFQNTDTGEAFNCPDNKKIYNYNASFTLTVENLDPALLTNEATAPNQPRSQAITAT TNKVVYRNFVNGSGSITSTYDFCAAQIPSLPLLNQTWIGADTSETKKATIEVTTEKIGDKTFIHTVVLKNVKLTKDSSYF QLGNTFTLGKITVNL >Mature_335_residues MKKYASLIFLAFLLNGCDDGDLTVDEINFDSVTPVSCTTFTENSLSTDPTIIYKLKTQEAFVLQLPQTNGLVNNNGTVTY DIDNSIYRVLYRAYNGAVAKDNICGTIPPSSPNVTEEWVGASGKIKIVSSQVPTTTDANDSFRIEAYNHVITFENITFQK PSGPQVQEIFEFGTFKTTVTPADLTFQNTDTGEAFNCPDNKKIYNYNASFTLTVENLDPALLTNEATAPNQPRSQAITAT TNKVVYRNFVNGSGSITSTYDFCAAQIPSLPLLNQTWIGADTSETKKATIEVTTEKIGDKTFIHTVVLKNVKLTKDSSYF QLGNTFTLGKITVNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36789; Mature: 36789
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYASLIFLAFLLNGCDDGDLTVDEINFDSVTPVSCTTFTENSLSTDPTIIYKLKTQEA CCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEEECCCE FVLQLPQTNGLVNNNGTVTYDIDNSIYRVLYRAYNGAVAKDNICGTIPPSSPNVTEEWVG EEEEECCCCCEECCCCEEEEEECHHHHHHHHHHHCCCEECCCCCEECCCCCCCCCHHHCC ASGKIKIVSSQVPTTTDANDSFRIEAYNHVITFENITFQKPSGPQVQEIFEFGTFKTTVT CCCEEEEEECCCCCCCCCCCCEEEEEEEEEEEECCEEEECCCCCHHHHHHHCCCEEEEEC PADLTFQNTDTGEAFNCPDNKKIYNYNASFTLTVENLDPALLTNEATAPNQPRSQAITAT CCCEEEECCCCCCEECCCCCCEEEEECCEEEEEECCCCCEEEECCCCCCCCCCCCEEEEE TNKVVYRNFVNGSGSITSTYDFCAAQIPSLPLLNQTWIGADTSETKKATIEVTTEKIGDK CCEEEEEEECCCCCCEEEHHHHHHHHCCCCCCCCCEECCCCCCCCCEEEEEEEHHHCCCH TFIHTVVLKNVKLTKDSSYFQLGNTFTLGKITVNL HEEEEEEEECEEEECCCCEEEECCEEEEEEEEEEC >Mature Secondary Structure MKKYASLIFLAFLLNGCDDGDLTVDEINFDSVTPVSCTTFTENSLSTDPTIIYKLKTQEA CCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEEECCCE FVLQLPQTNGLVNNNGTVTYDIDNSIYRVLYRAYNGAVAKDNICGTIPPSSPNVTEEWVG EEEEECCCCCEECCCCEEEEEECHHHHHHHHHHHCCCEECCCCCEECCCCCCCCCHHHCC ASGKIKIVSSQVPTTTDANDSFRIEAYNHVITFENITFQKPSGPQVQEIFEFGTFKTTVT CCCEEEEEECCCCCCCCCCCCEEEEEEEEEEEECCEEEECCCCCHHHHHHHCCCEEEEEC PADLTFQNTDTGEAFNCPDNKKIYNYNASFTLTVENLDPALLTNEATAPNQPRSQAITAT CCCEEEECCCCCCEECCCCCCEEEEECCEEEEEECCCCCEEEECCCCCCCCCCCCEEEEE TNKVVYRNFVNGSGSITSTYDFCAAQIPSLPLLNQTWIGADTSETKKATIEVTTEKIGDK CCEEEEEEECCCCCCEEEHHHHHHHHCCCCCCCCCEECCCCCCCCCEEEEEEEHHHCCCH TFIHTVVLKNVKLTKDSSYFQLGNTFTLGKITVNL HEEEEEEEECEEEECCCCEEEECCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA