| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is srpH [H]
Identifier: 146300260
GI number: 146300260
Start: 2992111
End: 2992902
Strand: Reverse
Name: srpH [H]
Synonym: Fjoh_2505
Alternate gene names: 146300260
Gene position: 2992902-2992111 (Counterclockwise)
Preceding gene: 146300262
Following gene: 146300259
Centisome position: 49.09
GC content: 34.72
Gene sequence:
>792_bases GTGACAAAAGACAATATCATACAAAATATTAAGGCTTTAAAGAGCCATTCTAATATAAATTACGGTATCAAAACCAAAAC TGAAGATTTTACCGAGAAGCTTTTCTATACCCTTTTTGATTCGAATGCCGCACTTGACGAAAGCATTGACGAACTTGAAA TTCGTTTTAAAGAAATTGCTGTTTTAGCCTGCAAAAAACCCGAAAATCTTTGCGAATCAATCTGGGATCGCTTTGTAGAA AAACTTCCGGGCGTTTTAGAAAAATTAAACGAAGATGCTGCTTATATTCTTGAAAATGATCCGGCATCAAACAGTATCGA TGAAGTTTATCTAGGATATCCTGGTTTTTATGCCATTGCAATTTACAGATTAAGCCACGAATTATACAAACTAGATCTAT TGTTGTTTTCGAGATTAATGAGCGAATATGCACATAGAATTACCGGAACTGATATTCATGCTGGTGCTGATATTGCTTCG CCATTTTTTATAGATCACGCCACAGGAATCGTTATTGGCGAAACTACCGTTATTAAAAAACATGTCAAGATTTATCAAGG AGTTACTTTAGGAGCTTTAAGCGTAAGCAAAGACATGAAAAATGCCAAAAGACATCCAACCGTTGAAGCAAATGTCTGTA TTTATGCCAATGCCACCATTTTGGGCGGAGGCACAATTATAGGAAAAAATAGTGTTATTGGAGGAAATTCATGGGTTACT AAATCTATTCCCGAAGATTCTATCGTATTAAACACCACTACAACAGAAGTCAAAATAAAAGAAAAAAAATAA
Upstream 100 bases:
>100_bases TAGGATTTTTAAAACAAAATTTCTTTAGTTAATTCGTGTCCTTATTTACAAAAAACACCTTACTTTTAACGTTTTAAAAT ATCCACTCAATTTTATTATT
Downstream 100 bases:
>100_bases AATGGGTCCACAGAAACTGCTAAACCTAATTGGAAATACTCCATTAATGGAAACGGTCAATTTGGTTAAAAATAAAAACG TTAAACTTTTACTGAAACTC
Product: Serine O-acetyltransferase
Products: NA
Alternate protein names: SAT [H]
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MTKDNIIQNIKALKSHSNINYGIKTKTEDFTEKLFYTLFDSNAALDESIDELEIRFKEIAVLACKKPENLCESIWDRFVE KLPGVLEKLNEDAAYILENDPASNSIDEVYLGYPGFYAIAIYRLSHELYKLDLLLFSRLMSEYAHRITGTDIHAGADIAS PFFIDHATGIVIGETTVIKKHVKIYQGVTLGALSVSKDMKNAKRHPTVEANVCIYANATILGGGTIIGKNSVIGGNSWVT KSIPEDSIVLNTTTTEVKIKEKK
Sequences:
>Translated_263_residues MTKDNIIQNIKALKSHSNINYGIKTKTEDFTEKLFYTLFDSNAALDESIDELEIRFKEIAVLACKKPENLCESIWDRFVE KLPGVLEKLNEDAAYILENDPASNSIDEVYLGYPGFYAIAIYRLSHELYKLDLLLFSRLMSEYAHRITGTDIHAGADIAS PFFIDHATGIVIGETTVIKKHVKIYQGVTLGALSVSKDMKNAKRHPTVEANVCIYANATILGGGTIIGKNSVIGGNSWVT KSIPEDSIVLNTTTTEVKIKEKK >Mature_262_residues TKDNIIQNIKALKSHSNINYGIKTKTEDFTEKLFYTLFDSNAALDESIDELEIRFKEIAVLACKKPENLCESIWDRFVEK LPGVLEKLNEDAAYILENDPASNSIDEVYLGYPGFYAIAIYRLSHELYKLDLLLFSRLMSEYAHRITGTDIHAGADIASP FFIDHATGIVIGETTVIKKHVKIYQGVTLGALSVSKDMKNAKRHPTVEANVCIYANATILGGGTIIGKNSVIGGNSWVTK SIPEDSIVLNTTTTEVKIKEKK
Specific function: Cysteine biosynthesis. [C]
COG id: COG1045
COG function: function code E; Serine acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1790035, Length=162, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=9e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: =2.3.1.30 [H]
Molecular weight: Translated: 29250; Mature: 29119
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKDNIIQNIKALKSHSNINYGIKTKTEDFTEKLFYTLFDSNAALDESIDELEIRFKEIA CCHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHEE VLACKKPENLCESIWDRFVEKLPGVLEKLNEDAAYILENDPASNSIDEVYLGYPGFYAIA EEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCHHHHH IYRLSHELYKLDLLLFSRLMSEYAHRITGTDIHAGADIASPFFIDHATGIVIGETTVIKK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEEECCHHHHHH HVKIYQGVTLGALSVSKDMKNAKRHPTVEANVCIYANATILGGGTIIGKNSVIGGNSWVT HHHHHCCCEEEHHHHHHHHHHHHCCCCCEEEEEEEECCEEEECCEEEECCCEECCCCCEE KSIPEDSIVLNTTTTEVKIKEKK CCCCCCCEEEEECCEEEEEECCC >Mature Secondary Structure TKDNIIQNIKALKSHSNINYGIKTKTEDFTEKLFYTLFDSNAALDESIDELEIRFKEIA CHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHEE VLACKKPENLCESIWDRFVEKLPGVLEKLNEDAAYILENDPASNSIDEVYLGYPGFYAIA EEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCHHHHH IYRLSHELYKLDLLLFSRLMSEYAHRITGTDIHAGADIASPFFIDHATGIVIGETTVIKK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEEECCHHHHHH HVKIYQGVTLGALSVSKDMKNAKRHPTVEANVCIYANATILGGGTIIGKNSVIGGNSWVT HHHHHCCCEEEHHHHHHHHHHHHCCCCCEEEEEEEECCEEEECCEEEECCCEECCCCCEE KSIPEDSIVLNTTTTEVKIKEKK CCCCCCCEEEEECCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7603442 [H]