| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is iolS [H]
Identifier: 146300258
GI number: 146300258
Start: 2990091
End: 2991077
Strand: Reverse
Name: iolS [H]
Synonym: Fjoh_2503
Alternate gene names: 146300258
Gene position: 2991077-2990091 (Counterclockwise)
Preceding gene: 146300259
Following gene: 146300257
Centisome position: 49.06
GC content: 36.27
Gene sequence:
>987_bases ATGAACTACAGAAAACTAGGAAAAACCAATTTTAATATCTCTGAAATCTCTCTGGGAACCTGGCAGGTTGGCGGAAAATG GGGATCAGGATTTAATGATAAAACAGCCGACGAATTAATAAATACTGCCATAGATAATGGCGTAAATTTTATTGATACGG CCGATGTTTATGAAAACGGACTAAGCGAAACTGCTGTTGGACGAGTAGTTCGTTCACGATCTGAACGTATTTATGTAGCC ACAAAATGCGGACGCCAGATTAATCCGCATGTGAATGAAGGCTATCAGCCAAAAGTACTTCAAAAGTTTGTTGAAGACAG TTTAAAAAGAACTGGATTAGAAACTTTAGATTTAATTCAGCTGCACTGTCCGCCGACAGAAGTATATTACCGTCCTGAAA TCTTCGAAATGTTTGATCGTTTAAAAGATCAGGGTAAAATTCAAAATTTAGGAGTAAGTGTCGAAAAAGTTGAAGAAGCT TTAAAAGCAATCGAATACTCTAATGTAACGACTGTTCAGATTATTTTTAACCTGTTTCGTCAGCGTCCGTCGCAATTATT CTTCTCAGAAGCCAAAAAGAAAGATATTGGAATCATTGCGCGTGTTCCTCTTGCCAGCGGACTTTTAACGGGTAAATTTG ATGCTAAAACGACTTTTGATGCTCAGGATCATCGTAATTTCAACAGAAACGGAGATGCTTTTGATAAAGGCGAAACTTTT TCAGGAATCGATTATGATTTAGGTTTAAAAGCTGTTGAAGAATTAAAAGCACTTTTTCCTGAAACTACAAACCTCGCTCC TATTGCACTGCAATGGATTTTAAGTTTTAACGAAATAAGCTGTATTATTCCGGGAGCTTCAAAAGAAAGTCATGTACTTT CCAATTTATCTGTTTATGATCTGCCAAAATTATCTCCTGAGAAAATTTTGGCTATGAATAAAATTTACGAAGAGTATATT AAACCTTCTGTGCATCATCTTTGGTAG
Upstream 100 bases:
>100_bases AAACTACAACCCTTATACCCAAAAAAGACGCACTGCTGTGCGCCTCTATAAAAAACCTTTACACCTTTGTACCTCTGAAC CTTTGTAACTTAAAAAGAAA
Downstream 100 bases:
>100_bases CTTTATGCTTCTAAGATATTAAGCAGCTGAGTTTTTAAGTTTTTCCAGGCTTAGAAACTCAGTTTTTATTTTTCTTCCTG ACGCAACCATTTTACTAAAG
Product: aldo/keto reductase
Products: NA
Alternate protein names: AKR11A; Vegetative protein 147; VEG147 [H]
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MNYRKLGKTNFNISEISLGTWQVGGKWGSGFNDKTADELINTAIDNGVNFIDTADVYENGLSETAVGRVVRSRSERIYVA TKCGRQINPHVNEGYQPKVLQKFVEDSLKRTGLETLDLIQLHCPPTEVYYRPEIFEMFDRLKDQGKIQNLGVSVEKVEEA LKAIEYSNVTTVQIIFNLFRQRPSQLFFSEAKKKDIGIIARVPLASGLLTGKFDAKTTFDAQDHRNFNRNGDAFDKGETF SGIDYDLGLKAVEELKALFPETTNLAPIALQWILSFNEISCIIPGASKESHVLSNLSVYDLPKLSPEKILAMNKIYEEYI KPSVHHLW
Sequences:
>Translated_328_residues MNYRKLGKTNFNISEISLGTWQVGGKWGSGFNDKTADELINTAIDNGVNFIDTADVYENGLSETAVGRVVRSRSERIYVA TKCGRQINPHVNEGYQPKVLQKFVEDSLKRTGLETLDLIQLHCPPTEVYYRPEIFEMFDRLKDQGKIQNLGVSVEKVEEA LKAIEYSNVTTVQIIFNLFRQRPSQLFFSEAKKKDIGIIARVPLASGLLTGKFDAKTTFDAQDHRNFNRNGDAFDKGETF SGIDYDLGLKAVEELKALFPETTNLAPIALQWILSFNEISCIIPGASKESHVLSNLSVYDLPKLSPEKILAMNKIYEEYI KPSVHHLW >Mature_328_residues MNYRKLGKTNFNISEISLGTWQVGGKWGSGFNDKTADELINTAIDNGVNFIDTADVYENGLSETAVGRVVRSRSERIYVA TKCGRQINPHVNEGYQPKVLQKFVEDSLKRTGLETLDLIQLHCPPTEVYYRPEIFEMFDRLKDQGKIQNLGVSVEKVEEA LKAIEYSNVTTVQIIFNLFRQRPSQLFFSEAKKKDIGIIARVPLASGLLTGKFDAKTTFDAQDHRNFNRNGDAFDKGETF SGIDYDLGLKAVEELKALFPETTNLAPIALQWILSFNEISCIIPGASKESHVLSNLSVYDLPKLSPEKILAMNKIYEEYI KPSVHHLW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=333, Percent_Identity=26.4264264264264, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI27436971, Length=333, Percent_Identity=24.9249249249249, Blast_Score=93, Evalue=4e-19, Organism=Homo sapiens, GI4504825, Length=330, Percent_Identity=25.7575757575758, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI27436962, Length=320, Percent_Identity=25.3125, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI27436964, Length=320, Percent_Identity=25.3125, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI27436966, Length=320, Percent_Identity=25, Blast_Score=84, Evalue=1e-16, Organism=Escherichia coli, GI87081735, Length=338, Percent_Identity=26.9230769230769, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI1788070, Length=317, Percent_Identity=25.5520504731861, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1789375, Length=317, Percent_Identity=24.9211356466877, Blast_Score=79, Evalue=3e-16, Organism=Caenorhabditis elegans, GI212645785, Length=331, Percent_Identity=21.1480362537764, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24640980, Length=347, Percent_Identity=24.4956772334294, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI45549126, Length=347, Percent_Identity=24.4956772334294, Blast_Score=85, Evalue=7e-17, Organism=Drosophila melanogaster, GI24646155, Length=220, Percent_Identity=27.7272727272727, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24646159, Length=185, Percent_Identity=27.5675675675676, Blast_Score=71, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR018170 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 37032; Mature: 37032
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYRKLGKTNFNISEISLGTWQVGGKWGSGFNDKTADELINTAIDNGVNFIDTADVYENG CCCCCCCCCCCCEEEEECCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEECHHHHHCC LSETAVGRVVRSRSERIYVATKCGRQINPHVNEGYQPKVLQKFVEDSLKRTGLETLDLIQ CHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHEEE LHCPPTEVYYRPEIFEMFDRLKDQGKIQNLGVSVEKVEEALKAIEYSNVTTVQIIFNLFR EECCCCCEEECCHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH QRPSQLFFSEAKKKDIGIIARVPLASGLLTGKFDAKTTFDAQDHRNFNRNGDAFDKGETF HCHHHHHHHHHCCCCCCEEEECCHHCCCEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCC SGIDYDLGLKAVEELKALFPETTNLAPIALQWILSFNEISCIIPGASKESHVLSNLSVYD CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCHHHHHCCCCCC LPKLSPEKILAMNKIYEEYIKPSVHHLW CCCCCHHHHHHHHHHHHHHHCCHHHHCC >Mature Secondary Structure MNYRKLGKTNFNISEISLGTWQVGGKWGSGFNDKTADELINTAIDNGVNFIDTADVYENG CCCCCCCCCCCCEEEEECCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEECHHHHHCC LSETAVGRVVRSRSERIYVATKCGRQINPHVNEGYQPKVLQKFVEDSLKRTGLETLDLIQ CHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHEEE LHCPPTEVYYRPEIFEMFDRLKDQGKIQNLGVSVEKVEEALKAIEYSNVTTVQIIFNLFR EECCCCCEEECCHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH QRPSQLFFSEAKKKDIGIIARVPLASGLLTGKFDAKTTFDAQDHRNFNRNGDAFDKGETF HCHHHHHHHHHCCCCCCEEEECCHHCCCEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCC SGIDYDLGLKAVEELKALFPETTNLAPIALQWILSFNEISCIIPGASKESHVLSNLSVYD CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCHHHHHCCCCCC LPKLSPEKILAMNKIYEEYIKPSVHHLW CCCCCHHHHHHHHHHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584049; 9384377; 9298659 [H]