| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300241
Identifier: 146300241
GI number: 146300241
Start: 2975164
End: 2975736
Strand: Reverse
Name: 146300241
Synonym: Fjoh_2486
Alternate gene names: NA
Gene position: 2975736-2975164 (Counterclockwise)
Preceding gene: 146300242
Following gene: 146300238
Centisome position: 48.81
GC content: 30.19
Gene sequence:
>573_bases ATGGAAGAAATAATTCACATTCAGAAAACATTTGAGAAAGTTGTTTATATCGATAAAAGAATAAACAACAGGGAATTTGA AGACTGTGTGTTTAAAAACTGTGATTTTTCGAATAGTAATTTCGGCTCTAATACATTTTTGGACTGTGAATTTATTGACT GTAACTTATCTATGACAACTCTAGCCGGAACGAGTTTAAAAAATGTGAGTTTTAGGAACTGTAAACTTCTGGGAATTGCT TTTAATGAATGTGATGATTTCTTATTTCAGGTTCATTTTGAAGACTGCACTTTAGATTATGCTGTTTTTTCAAATAAAAA AATGCCAAAAACAAAATTCATCAATTCTTCGGTGCGTGAAGTAACTTTTATTGGCACTAATTTAACAAGCTCTGTTTTTG ACAATTGTAATCTTGACGGTGCAATTTTTAATGAAACCCAATTGGCAGGTGTCAATTTTAAAACAGCTTATAATTATAAA ATCGATCCAGAATTCAACCCAATGAGAAAAGCACAATTTTCTACAGAGGGAATTGTTGGACTTTTAGATAAATACGATAT TAAGATCGTATAA
Upstream 100 bases:
>100_bases TTTATTTCGTTTATAACTACGCTGTTTCATATCAAGTAACAGAAGAAAACATCTATATTCTTCGAGTTCGTCACAATGCA CAGAAACCCCAAAAACACTC
Downstream 100 bases:
>100_bases GAAATTTTAAACAGCATAAATTTTACTTTTCAATTGTTCTCAGTGCTTTCTTTATAATATAGGCAGTTTCTTTTGTTGGA CTTTCTGTCTGCCATTTTTG
Product: pentapeptide repeat-containing protein
Products: NA
Alternate protein names: Pentapeptide Repeat Protein; Antibiotic Resistance Protein McbG; Protein McbG; MCBG Protein-Like; Related MCBG Protein; Pentapeptide Repeats Protein; MCBG-Like Protein; Pentapeptide Repeat; Mcbg Like Protein; MCBG Protein; Quinolone Resistance Protein; McbG Protein; Antibiotic Resistance Protein; Mcbg Protein; McbG-Like Protein
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MEEIIHIQKTFEKVVYIDKRINNREFEDCVFKNCDFSNSNFGSNTFLDCEFIDCNLSMTTLAGTSLKNVSFRNCKLLGIA FNECDDFLFQVHFEDCTLDYAVFSNKKMPKTKFINSSVREVTFIGTNLTSSVFDNCNLDGAIFNETQLAGVNFKTAYNYK IDPEFNPMRKAQFSTEGIVGLLDKYDIKIV
Sequences:
>Translated_190_residues MEEIIHIQKTFEKVVYIDKRINNREFEDCVFKNCDFSNSNFGSNTFLDCEFIDCNLSMTTLAGTSLKNVSFRNCKLLGIA FNECDDFLFQVHFEDCTLDYAVFSNKKMPKTKFINSSVREVTFIGTNLTSSVFDNCNLDGAIFNETQLAGVNFKTAYNYK IDPEFNPMRKAQFSTEGIVGLLDKYDIKIV >Mature_190_residues MEEIIHIQKTFEKVVYIDKRINNREFEDCVFKNCDFSNSNFGSNTFLDCEFIDCNLSMTTLAGTSLKNVSFRNCKLLGIA FNECDDFLFQVHFEDCTLDYAVFSNKKMPKTKFINSSVREVTFIGTNLTSSVFDNCNLDGAIFNETQLAGVNFKTAYNYK IDPEFNPMRKAQFSTEGIVGLLDKYDIKIV
Specific function: Unknown
COG id: COG1357
COG function: function code S; Uncharacterized low-complexity proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21796; Mature: 21796
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEIIHIQKTFEKVVYIDKRINNREFEDCVFKNCDFSNSNFGSNTFLDCEFIDCNLSMTT CCHHHHHHHHHHHHEEEECCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCEEEE LAGTSLKNVSFRNCKLLGIAFNECDDFLFQVHFEDCTLDYAVFSNKKMPKTKFINSSVRE ECCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCEEEEEEECCCCCCHHHHCCCCCEE VTFIGTNLTSSVFDNCNLDGAIFNETQLAGVNFKTAYNYKIDPEFNPMRKAQFSTEGIVG EEEEECCCCHHHHCCCCCCCEEECCEEEECCEEEEEEEEEECCCCCCHHHHHCCCCCEEE LLDKYDIKIV ECCCEEEEEC >Mature Secondary Structure MEEIIHIQKTFEKVVYIDKRINNREFEDCVFKNCDFSNSNFGSNTFLDCEFIDCNLSMTT CCHHHHHHHHHHHHEEEECCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCEEEE LAGTSLKNVSFRNCKLLGIAFNECDDFLFQVHFEDCTLDYAVFSNKKMPKTKFINSSVRE ECCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCEEEEEEECCCCCCHHHHCCCCCEE VTFIGTNLTSSVFDNCNLDGAIFNETQLAGVNFKTAYNYKIDPEFNPMRKAQFSTEGIVG EEEEECCCCHHHHCCCCCCCEEECCEEEECCEEEEEEEEEECCCCCCHHHHHCCCCCEEE LLDKYDIKIV ECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA