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The map label for this gene is ytfH [C]

Identifier: 146300238

GI number: 146300238

Start: 2973253

End: 2973603

Strand: Reverse

Name: ytfH [C]

Synonym: Fjoh_2483

Alternate gene names: 146300238

Gene position: 2973603-2973253 (Counterclockwise)

Preceding gene: 146300241

Following gene: 146300237

Centisome position: 48.77

GC content: 36.75

Gene sequence:

>351_bases
ATGCAAACAAAGGAACGTAGCACAGAAAATAAAATCTGCCCATTAGAAATTGCTGTAAATACTATCAGCGGAAAATGGAA
AATCCCCATTGTCTGGCAGATTAATGATGGAAAAAAAAGACCAAGCGAATTTTTGCGCGGTATTGCTAAGGTAGACAGAC
GTGTTTTAAACCAGCAGTTAAATGAAATGGTTGAAGATGGCATATTAATCAAACATTCTTTTAACGAACTGCCTCCGCGG
GTTGAATACACTTTGACCGAAACAGGAAAACAATTAGTCGAAATACTTTGGAAACTAAATGACTGGGGAAAAACACTGAT
TTCTGAAAACAAAACCGAACTCCAATCTTAA

Upstream 100 bases:

>100_bases
TTCTACTTTAATTTTTGATTATTTTTGCAAAGATCGGAAAGCCGGATAGGTCTGGCAATACCGCATATTTTTGTCTCATA
GGGATATAAAAGTCAATTTT

Downstream 100 bases:

>100_bases
AACATTTCAATCATGAAAACTGATGAATCATATCTGGAAAGCGTAAAAAAGCAATTTCTATACTACAAAATGCTTGGAGA
AAAGGCAATGGATCAATTAG

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MQTKERSTENKICPLEIAVNTISGKWKIPIVWQINDGKKRPSEFLRGIAKVDRRVLNQQLNEMVEDGILIKHSFNELPPR
VEYTLTETGKQLVEILWKLNDWGKTLISENKTELQS

Sequences:

>Translated_116_residues
MQTKERSTENKICPLEIAVNTISGKWKIPIVWQINDGKKRPSEFLRGIAKVDRRVLNQQLNEMVEDGILIKHSFNELPPR
VEYTLTETGKQLVEILWKLNDWGKTLISENKTELQS
>Mature_116_residues
MQTKERSTENKICPLEIAVNTISGKWKIPIVWQINDGKKRPSEFLRGIAKVDRRVLNQQLNEMVEDGILIKHSFNELPPR
VEYTLTETGKQLVEILWKLNDWGKTLISENKTELQS

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=101, Percent_Identity=31.6831683168317, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 13488; Mature: 13488

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTKERSTENKICPLEIAVNTISGKWKIPIVWQINDGKKRPSEFLRGIAKVDRRVLNQQL
CCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
NEMVEDGILIKHSFNELPPRVEYTLTETGKQLVEILWKLNDWGKTLISENKTELQS
HHHHHCCEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure
MQTKERSTENKICPLEIAVNTISGKWKIPIVWQINDGKKRPSEFLRGIAKVDRRVLNQQL
CCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
NEMVEDGILIKHSFNELPPRVEYTLTETGKQLVEILWKLNDWGKTLISENKTELQS
HHHHHCCEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]