Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300233

Identifier: 146300233

GI number: 146300233

Start: 2967890

End: 2969371

Strand: Reverse

Name: 146300233

Synonym: Fjoh_2478

Alternate gene names: NA

Gene position: 2969371-2967890 (Counterclockwise)

Preceding gene: 146300234

Following gene: 146300232

Centisome position: 48.7

GC content: 36.23

Gene sequence:

>1482_bases
ATGAAACTAAATTTTCTAAAATCAATTGCACTGCTTGGTATTACAGGTTTCTCTGTAATAAGCTGTCAGAATGATGACAA
AGATTCTTCAAACGATGTAAATACAAGCATCGATTTTACTTCACATTCAAAAGTTCCTGCTTTTGTTTATCCAATGACAG
GTTTTGAAAACTTAAAAATCAGCACTTTAATCGCAAGTTCTGATGTTTTACCAGAATCACCTTCATTTGTTTATGGTGCA
CAGCCAGATGGTGCAGGATTAATGAGAAATCCAAATGGTGAAGGTTACATCATGATTACAAATCACGAAATCCTTCAATC
AGTTTCAAGAGTTTATTTAGATAAAACTTTCAAACCTGTAAAAGGAGATTATATAGTTGACGGCGTTGGAGGTTTAACAC
GTTTATGTTCTGCGACTTTGGCTACTCCTGAAATCCACGGGTTTGGACCAATCTTTTTAACTGCCGGAGAAAGCGGACAG
GAAAGTATGGTTCACGGAATTAATCCGCTTGGATTATCTTCTGATAAAGCAAGAACTGACAGAGTTTTGCCAGCTTTAGG
AAAAGCAAGTATGGAAAACGCTGTTCCACTTACAAAAGAAGCATATCCTGGAAAAACAGTTATTTTAATTGGAGAAGATC
AATCGTATGCAACTTCTCACGTAAGTGCAGGACAATTAATCATGTACATCGGTTCTTCTGTTGGTGACTTATCAAACGGA
AAACTATATGCTTTAAAAAGAACAGATGGAAATCAGGTTGAAACTTCTATCACTTTAAATAATTCATATCCAGTTGAATT
TGTTGAAATTCCAAATGCTAAAAACCTAACTGGAGCTGTTATTAATACTACTGTAAACGACTTAAAAGCAATTCGTTTTT
CAAGAGTTGAAGATGTTGATTACAGAAAAGGAAGCGCAAGCAATAACAGAGAAATCTATTTTACAGCGACTGGTCAGGCA
ACAAACAACGCTCCTGTTGAAGGATATACAATGTGGGGAAGAGTTTATAAATTGAAATTGGATGCTGCAAATCCATTAAA
AGGAACTTTAGAATTAGCTGTTGAAGGTGACAGTACTCCTGGAACCGGAATTATCAATCCAGACAATTTATGTGTAACTG
AAAACTACGTTTACATTCAGGAAGATGGTGACAGTTATTATGCTGATGCTAAACACGATTCATACATCTGGCAGTACAGC
ATCGCAACAAAACAAAATAAACCGTGGTTAAACATGAACCATAAAAGAACTGATGCTGCATGGAATGGACTTTACAACCA
AACTGGCGAAATGAGATTTGGAAGCTGGGAATTTGGTGCTATGGAAGATATTTCAGATATCATTGGTGTTCCGGATACTT
TTACGGTAAATATTCACCCTCATACCTGGCAGAGTGATGCATTTAAAAATGCAGACGGTTCTGGTACTCAAACTAATAAA
GAGGGAGGTCAAACTGTAATTATCAGAAACGTACAACGATAA

Upstream 100 bases:

>100_bases
CAAGACTTATTATTTGTTAGCAATAAGAAAAAATTCACGTAACATGTATTTTATTTTTGAAAGATAGCTTTGCTTAATCA
AAAAAAATAAAAACACAGTT

Downstream 100 bases:

>100_bases
TAATTTCGTTTAAATCATAAAACAACCCTTATTTTCAATAAGGGTTGTTTCTATTACAATACTATTATGAAATTAAAACA
TTTTACTTTCCTGATTTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MKLNFLKSIALLGITGFSVISCQNDDKDSSNDVNTSIDFTSHSKVPAFVYPMTGFENLKISTLIASSDVLPESPSFVYGA
QPDGAGLMRNPNGEGYIMITNHEILQSVSRVYLDKTFKPVKGDYIVDGVGGLTRLCSATLATPEIHGFGPIFLTAGESGQ
ESMVHGINPLGLSSDKARTDRVLPALGKASMENAVPLTKEAYPGKTVILIGEDQSYATSHVSAGQLIMYIGSSVGDLSNG
KLYALKRTDGNQVETSITLNNSYPVEFVEIPNAKNLTGAVINTTVNDLKAIRFSRVEDVDYRKGSASNNREIYFTATGQA
TNNAPVEGYTMWGRVYKLKLDAANPLKGTLELAVEGDSTPGTGIINPDNLCVTENYVYIQEDGDSYYADAKHDSYIWQYS
IATKQNKPWLNMNHKRTDAAWNGLYNQTGEMRFGSWEFGAMEDISDIIGVPDTFTVNIHPHTWQSDAFKNADGSGTQTNK
EGGQTVIIRNVQR

Sequences:

>Translated_493_residues
MKLNFLKSIALLGITGFSVISCQNDDKDSSNDVNTSIDFTSHSKVPAFVYPMTGFENLKISTLIASSDVLPESPSFVYGA
QPDGAGLMRNPNGEGYIMITNHEILQSVSRVYLDKTFKPVKGDYIVDGVGGLTRLCSATLATPEIHGFGPIFLTAGESGQ
ESMVHGINPLGLSSDKARTDRVLPALGKASMENAVPLTKEAYPGKTVILIGEDQSYATSHVSAGQLIMYIGSSVGDLSNG
KLYALKRTDGNQVETSITLNNSYPVEFVEIPNAKNLTGAVINTTVNDLKAIRFSRVEDVDYRKGSASNNREIYFTATGQA
TNNAPVEGYTMWGRVYKLKLDAANPLKGTLELAVEGDSTPGTGIINPDNLCVTENYVYIQEDGDSYYADAKHDSYIWQYS
IATKQNKPWLNMNHKRTDAAWNGLYNQTGEMRFGSWEFGAMEDISDIIGVPDTFTVNIHPHTWQSDAFKNADGSGTQTNK
EGGQTVIIRNVQR
>Mature_493_residues
MKLNFLKSIALLGITGFSVISCQNDDKDSSNDVNTSIDFTSHSKVPAFVYPMTGFENLKISTLIASSDVLPESPSFVYGA
QPDGAGLMRNPNGEGYIMITNHEILQSVSRVYLDKTFKPVKGDYIVDGVGGLTRLCSATLATPEIHGFGPIFLTAGESGQ
ESMVHGINPLGLSSDKARTDRVLPALGKASMENAVPLTKEAYPGKTVILIGEDQSYATSHVSAGQLIMYIGSSVGDLSNG
KLYALKRTDGNQVETSITLNNSYPVEFVEIPNAKNLTGAVINTTVNDLKAIRFSRVEDVDYRKGSASNNREIYFTATGQA
TNNAPVEGYTMWGRVYKLKLDAANPLKGTLELAVEGDSTPGTGIINPDNLCVTENYVYIQEDGDSYYADAKHDSYIWQYS
IATKQNKPWLNMNHKRTDAAWNGLYNQTGEMRFGSWEFGAMEDISDIIGVPDTFTVNIHPHTWQSDAFKNADGSGTQTNK
EGGQTVIIRNVQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53702; Mature: 53702

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNFLKSIALLGITGFSVISCQNDDKDSSNDVNTSIDFTSHSKVPAFVYPMTGFENLKI
CCCHHHHHHHHHEECCEEEEEECCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCEEE
STLIASSDVLPESPSFVYGAQPDGAGLMRNPNGEGYIMITNHEILQSVSRVYLDKTFKPV
EEEEECCCCCCCCCCEEEECCCCCCCCEECCCCCEEEEEECHHHHHHHHHHHHHCCCCCC
KGDYIVDGVGGLTRLCSATLATPEIHGFGPIFLTAGESGQESMVHGINPLGLSSDKARTD
CCCEEEECCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHCCCCCCCCCCCCHHH
RVLPALGKASMENAVPLTKEAYPGKTVILIGEDQSYATSHVSAGQLIMYIGSSVGDLSNG
HHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHCCCCCCEEEEEECCCCCCCCCC
KLYALKRTDGNQVETSITLNNSYPVEFVEIPNAKNLTGAVINTTVNDLKAIRFSRVEDVD
EEEEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCCEEEECCHHHHHHHHHHCCCCCC
YRKGSASNNREIYFTATGQATNNAPVEGYTMWGRVYKLKLDAANPLKGTLELAVEGDSTP
CCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCEEEEEEECCCCC
GTGIINPDNLCVTENYVYIQEDGDSYYADAKHDSYIWQYSIATKQNKPWLNMNHKRTDAA
CCCEECCCCEEEECCEEEEEECCCCEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCHH
WNGLYNQTGEMRFGSWEFGAMEDISDIIGVPDTFTVNIHPHTWQSDAFKNADGSGTQTNK
HCCCCCCCCCEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
EGGQTVIIRNVQR
CCCCEEEEEECCC
>Mature Secondary Structure
MKLNFLKSIALLGITGFSVISCQNDDKDSSNDVNTSIDFTSHSKVPAFVYPMTGFENLKI
CCCHHHHHHHHHEECCEEEEEECCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCEEE
STLIASSDVLPESPSFVYGAQPDGAGLMRNPNGEGYIMITNHEILQSVSRVYLDKTFKPV
EEEEECCCCCCCCCCEEEECCCCCCCCEECCCCCEEEEEECHHHHHHHHHHHHHCCCCCC
KGDYIVDGVGGLTRLCSATLATPEIHGFGPIFLTAGESGQESMVHGINPLGLSSDKARTD
CCCEEEECCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHCCCCCCCCCCCCHHH
RVLPALGKASMENAVPLTKEAYPGKTVILIGEDQSYATSHVSAGQLIMYIGSSVGDLSNG
HHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHCCCCCCEEEEEECCCCCCCCCC
KLYALKRTDGNQVETSITLNNSYPVEFVEIPNAKNLTGAVINTTVNDLKAIRFSRVEDVD
EEEEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCCEEEECCHHHHHHHHHHCCCCCC
YRKGSASNNREIYFTATGQATNNAPVEGYTMWGRVYKLKLDAANPLKGTLELAVEGDSTP
CCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCEEEEEEECCCCC
GTGIINPDNLCVTENYVYIQEDGDSYYADAKHDSYIWQYSIATKQNKPWLNMNHKRTDAA
CCCEECCCCEEEECCEEEEEECCCCEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCHH
WNGLYNQTGEMRFGSWEFGAMEDISDIIGVPDTFTVNIHPHTWQSDAFKNADGSGTQTNK
HCCCCCCCCCEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
EGGQTVIIRNVQR
CCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA