| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300205
Identifier: 146300205
GI number: 146300205
Start: 2933179
End: 2935101
Strand: Reverse
Name: 146300205
Synonym: Fjoh_2450
Alternate gene names: NA
Gene position: 2935101-2933179 (Counterclockwise)
Preceding gene: 146300207
Following gene: 146300204
Centisome position: 48.14
GC content: 31.1
Gene sequence:
>1923_bases ATGCACTTTAAACACCCCGAAATTCTATACTTTCTGTTTTTATTGATTGTTCCAATTTTGGTTCATTTATTTCAATTACG ACGTTTTAAAACTTCTTATTTTACCAATGTTCTTTTCTTAAAAGAACTTGCAATACAAACCCGTAAAAGTTCTAAAATCA AAAAACGTTTATTGCTTGCCACTCGTATTTTACTGCTTACCTGTGCCATAATCGCTTTTGCGCAGCCATTTTTTGAGGCG AAAGACAGCAAAAATGCATCAAACGAAATGTACATTATTTTAGACAATTCGTTTAGTATGCAGGCAAAAGGCAAAAAAGG AGAATTATTAAAACGTGCCGTTCAGGAATTACTCGAAAACACGCCCGAAACTGCTCAGTTTTCATTACTTACAAATACCG AAAACTACTGGAATACAGATATTAAATCAGTAAAAAGTTCTTTACAGAATTTAAAATACAGTGCCGCGCCATTTGAACTT TCGTCGATTATGGCAAAAGTAAAAGCGCACAAATCTGCATATAATAAAGATATTGTAATTATTTCGGATGCAGTTGGCTT AACTGATATTAAAAATATTGATACTGGAAAAAAACCTTATTTTATAATTCCCGAAGCAGAGCAAAAAAACAATGTATCTA TTGACAGCGTTTACATTAATCAGACTTTAGAGAATTTCTACGAAATTGGTGTTGATTTATCAGGCTACGGAGAAGATTTC AAACCCATTTCTACAGCATTATACAATCAAAACAAACTGATTGCCAAAACAATCATCAATTTTGATACAAAGAAAAAGAA AATCAGCTTCACGATTCCAAAAGAAGCTTTTCATGGTTATGTTTCAATAGAAGACAATGGTTTGACTTACGATAATAAAT TGTTTTTCAGCATTTCTAAAAACAAAAAAACAAACGTAATCAGCATTGGCGAACCCGAAAAAAGTAATTTCTTATCAAGA ATTTATACTTCTGCCGAATTCAATTACAACAATTACTCTATCAGTTCTCTGGATTACAATAGTTTAGAGAAACAAAATAC GATAATCTTAAACGAATTAGCTGAAATTCCGCAGGCTTTGCAGACCACTTTAAAAGCATTTGTTTCAAAAGGCGGTAATT TAGTTGTAATTCCTTCTGAAAAAACTTCAGTTTCAAATCTAAATTCGTTTTTAGGAAATTTTGGAAAAGTTCAGTTTAAC AATCTAAAAACAGAAAGTAAACTCATTACCAAAATTAATTTTGATCATCCGTTATTTTCTGGTGTTTTCGAAAATAAAAT CACAAATTTTCAATATCCAAAAACAAATAGTTCATTTGATATTTCAAGCCCATATCCGGCTGTTTTATCTTATGAAGATC AAAGTGCATTTGTAACGGCAGTTCAAAATCCTACAGCTGGAATTACAGTTTTTTCGGCTCCTATAAATGCCTCTAATTCA AATTTTCAGCAATCACCTCTAATTGTACCGTTGTTTTACAAAATAGCGCAGCACAATCAAAAAACTGGTATAAATGCCTT AACAATTGGCAGCAACCAGCCTTATTTCGTTGATGTTTTATTGACAAAAGATGCTATTTTGGAAGTAAAAGGAACTGAAG ATTCGTTTATTCCGATTCAGCAGATTTTGAATAATAAAGTCAAATTAACATTTAATGATTTTCCTGAAACAGCTGGAAAT TACAGCATTTTTGATAAAAAAGAATGGGTTGAAAATTTGAGTTTTAATTATAAAAGAACCGAAAGTGATTTGAGTAAGGT AAACACAAATGTAGTTTCTGATTTTAAAACTGCGGATACGATTTCGACCATTTTTAACACCTTACAAACTGAGCGTACCG ACAGTCAAATTTGGAAATGGTTTGTTATCTTTGCACTGTTATTTTTAGCATTAGAAATGGCAATTATAAAATTTGTAAAA TAA
Upstream 100 bases:
>100_bases TCTCTTATATAAACTTATATGGTTTAAATAATTTTTAATTTGTATTTTTGACCTGCATCTTCGCGAAAAATAAAACGTAG CGAAGTAAATCGAAGCTAGA
Downstream 100 bases:
>100_bases TTTTTTCACCATTAAAGAACATTAAGAATATTAAGCTTTCTCTTTATTAACTTAATTCTTCATGGTTCAAAAAAATTAAG CACTAATGTTTTAAAAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 640; Mature: 640
Protein sequence:
>640_residues MHFKHPEILYFLFLLIVPILVHLFQLRRFKTSYFTNVLFLKELAIQTRKSSKIKKRLLLATRILLLTCAIIAFAQPFFEA KDSKNASNEMYIILDNSFSMQAKGKKGELLKRAVQELLENTPETAQFSLLTNTENYWNTDIKSVKSSLQNLKYSAAPFEL SSIMAKVKAHKSAYNKDIVIISDAVGLTDIKNIDTGKKPYFIIPEAEQKNNVSIDSVYINQTLENFYEIGVDLSGYGEDF KPISTALYNQNKLIAKTIINFDTKKKKISFTIPKEAFHGYVSIEDNGLTYDNKLFFSISKNKKTNVISIGEPEKSNFLSR IYTSAEFNYNNYSISSLDYNSLEKQNTIILNELAEIPQALQTTLKAFVSKGGNLVVIPSEKTSVSNLNSFLGNFGKVQFN NLKTESKLITKINFDHPLFSGVFENKITNFQYPKTNSSFDISSPYPAVLSYEDQSAFVTAVQNPTAGITVFSAPINASNS NFQQSPLIVPLFYKIAQHNQKTGINALTIGSNQPYFVDVLLTKDAILEVKGTEDSFIPIQQILNNKVKLTFNDFPETAGN YSIFDKKEWVENLSFNYKRTESDLSKVNTNVVSDFKTADTISTIFNTLQTERTDSQIWKWFVIFALLFLALEMAIIKFVK
Sequences:
>Translated_640_residues MHFKHPEILYFLFLLIVPILVHLFQLRRFKTSYFTNVLFLKELAIQTRKSSKIKKRLLLATRILLLTCAIIAFAQPFFEA KDSKNASNEMYIILDNSFSMQAKGKKGELLKRAVQELLENTPETAQFSLLTNTENYWNTDIKSVKSSLQNLKYSAAPFEL SSIMAKVKAHKSAYNKDIVIISDAVGLTDIKNIDTGKKPYFIIPEAEQKNNVSIDSVYINQTLENFYEIGVDLSGYGEDF KPISTALYNQNKLIAKTIINFDTKKKKISFTIPKEAFHGYVSIEDNGLTYDNKLFFSISKNKKTNVISIGEPEKSNFLSR IYTSAEFNYNNYSISSLDYNSLEKQNTIILNELAEIPQALQTTLKAFVSKGGNLVVIPSEKTSVSNLNSFLGNFGKVQFN NLKTESKLITKINFDHPLFSGVFENKITNFQYPKTNSSFDISSPYPAVLSYEDQSAFVTAVQNPTAGITVFSAPINASNS NFQQSPLIVPLFYKIAQHNQKTGINALTIGSNQPYFVDVLLTKDAILEVKGTEDSFIPIQQILNNKVKLTFNDFPETAGN YSIFDKKEWVENLSFNYKRTESDLSKVNTNVVSDFKTADTISTIFNTLQTERTDSQIWKWFVIFALLFLALEMAIIKFVK >Mature_640_residues MHFKHPEILYFLFLLIVPILVHLFQLRRFKTSYFTNVLFLKELAIQTRKSSKIKKRLLLATRILLLTCAIIAFAQPFFEA KDSKNASNEMYIILDNSFSMQAKGKKGELLKRAVQELLENTPETAQFSLLTNTENYWNTDIKSVKSSLQNLKYSAAPFEL SSIMAKVKAHKSAYNKDIVIISDAVGLTDIKNIDTGKKPYFIIPEAEQKNNVSIDSVYINQTLENFYEIGVDLSGYGEDF KPISTALYNQNKLIAKTIINFDTKKKKISFTIPKEAFHGYVSIEDNGLTYDNKLFFSISKNKKTNVISIGEPEKSNFLSR IYTSAEFNYNNYSISSLDYNSLEKQNTIILNELAEIPQALQTTLKAFVSKGGNLVVIPSEKTSVSNLNSFLGNFGKVQFN NLKTESKLITKINFDHPLFSGVFENKITNFQYPKTNSSFDISSPYPAVLSYEDQSAFVTAVQNPTAGITVFSAPINASNS NFQQSPLIVPLFYKIAQHNQKTGINALTIGSNQPYFVDVLLTKDAILEVKGTEDSFIPIQQILNNKVKLTFNDFPETAGN YSIFDKKEWVENLSFNYKRTESDLSKVNTNVVSDFKTADTISTIFNTLQTERTDSQIWKWFVIFALLFLALEMAIIKFVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72545; Mature: 72545
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFKHPEILYFLFLLIVPILVHLFQLRRFKTSYFTNVLFLKELAIQTRKSSKIKKRLLLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRILLLTCAIIAFAQPFFEAKDSKNASNEMYIILDNSFSMQAKGKKGELLKRAVQELLEN HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEECCCCCHHHHHHHHHHHHHC TPETAQFSLLTNTENYWNTDIKSVKSSLQNLKYSAAPFELSSIMAKVKAHKSAYNKDIVI CCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEE ISDAVGLTDIKNIDTGKKPYFIIPEAEQKNNVSIDSVYINQTLENFYEIGVDLSGYGEDF EECCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCC KPISTALYNQNKLIAKTIINFDTKKKKISFTIPKEAFHGYVSIEDNGLTYDNKLFFSISK HHHHHHHHCCCCCHHHHHHCCCCCCCEEEEEECHHHHCCEEEEECCCCEECCEEEEEEEC NKKTNVISIGEPEKSNFLSRIYTSAEFNYNNYSISSLDYNSLEKQNTIILNELAEIPQAL CCCCCEEECCCCCHHHHHHHHHHHCEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHH QTTLKAFVSKGGNLVVIPSEKTSVSNLNSFLGNFGKVQFNNLKTESKLITKINFDHPLFS HHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCCEEECCCCCCCCEEEEECCCCHHHH GVFENKITNFQYPKTNSSFDISSPYPAVLSYEDQSAFVTAVQNPTAGITVFSAPINASNS HHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCEEEEECCCCCCCC NFQQSPLIVPLFYKIAQHNQKTGINALTIGSNQPYFVDVLLTKDAILEVKGTEDSFIPIQ CCCCCCEEHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEEECCEEEEEECCCCCCCHHH QILNNKVKLTFNDFPETAGNYSIFDKKEWVENLSFNYKRTESDLSKVNTNVVSDFKTADT HHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH ISTIFNTLQTERTDSQIWKWFVIFALLFLALEMAIIKFVK HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHFKHPEILYFLFLLIVPILVHLFQLRRFKTSYFTNVLFLKELAIQTRKSSKIKKRLLLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRILLLTCAIIAFAQPFFEAKDSKNASNEMYIILDNSFSMQAKGKKGELLKRAVQELLEN HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEECCCCCHHHHHHHHHHHHHC TPETAQFSLLTNTENYWNTDIKSVKSSLQNLKYSAAPFELSSIMAKVKAHKSAYNKDIVI CCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEE ISDAVGLTDIKNIDTGKKPYFIIPEAEQKNNVSIDSVYINQTLENFYEIGVDLSGYGEDF EECCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCC KPISTALYNQNKLIAKTIINFDTKKKKISFTIPKEAFHGYVSIEDNGLTYDNKLFFSISK HHHHHHHHCCCCCHHHHHHCCCCCCCEEEEEECHHHHCCEEEEECCCCEECCEEEEEEEC NKKTNVISIGEPEKSNFLSRIYTSAEFNYNNYSISSLDYNSLEKQNTIILNELAEIPQAL CCCCCEEECCCCCHHHHHHHHHHHCEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHH QTTLKAFVSKGGNLVVIPSEKTSVSNLNSFLGNFGKVQFNNLKTESKLITKINFDHPLFS HHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCCEEECCCCCCCCEEEEECCCCHHHH GVFENKITNFQYPKTNSSFDISSPYPAVLSYEDQSAFVTAVQNPTAGITVFSAPINASNS HHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCEEEEECCCCCCCC NFQQSPLIVPLFYKIAQHNQKTGINALTIGSNQPYFVDVLLTKDAILEVKGTEDSFIPIQ CCCCCCEEHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEEECCEEEEEECCCCCCCHHH QILNNKVKLTFNDFPETAGNYSIFDKKEWVENLSFNYKRTESDLSKVNTNVVSDFKTADT HHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH ISTIFNTLQTERTDSQIWKWFVIFALLFLALEMAIIKFVK HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA