| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300152
Identifier: 146300152
GI number: 146300152
Start: 2870834
End: 2871895
Strand: Reverse
Name: 146300152
Synonym: Fjoh_2397
Alternate gene names: NA
Gene position: 2871895-2870834 (Counterclockwise)
Preceding gene: 146300156
Following gene: 146300151
Centisome position: 47.1
GC content: 30.32
Gene sequence:
>1062_bases GTGACAAGAAAACATATCCTTCCCCTATTTCTTTTAATTCAGATTATCTTTTTAAAAGTTCTTCCTTTTTTTCCTGACTT TGTTGAAGGCTTTTACAGCAACAATTTATACATTAGAATTTCTCATTTCTTACGAATAGTTTTAGGTAAAATTCCTTTTT CTGTGGGCGACTGCATTTACGGTATTTTGATTATATCAATTATCAGCTGGTTCTGGAAAATTAGAAAAACATGGAAAACC GAATGGAAAGATCATATCTTAAAAATTTTAGGCAAAATTTCTGTTTATTATTTTCTGTTTCATGTGCTTTGGGCTTTTAA TTATTATCGTGAACCTCTTTTCCAGAAAATGGAAATTAAAAGAGAATACAGCGATGCTGATTTATTAGCGTTCACAAAAA AACTGATTGTTAGAACCAATGAAATCCAGTTTAAGATCACAAAAAATAAGAACGAGAAAATTCAACTTCCGTATTCACAG GAAGAAGTTTTTAAAATGAATTTAAGCGGATATAACAATTTAGCACAAGAGCATCCATATTTTAAATACAACACATTAAG CGTTAAAAAATCACTATTCAGCGTTCCATTAACTTATATGGGATTTGGCGGTTATTTAAATCCGTTTACCAATGAAGCAC AGGTAAATGATTTACTGCCTATGTATTCTTTCCCGCTCACGGCTTCACATGAAATGGCTCATCAAATTGGTTTTGCGAGT GAAAATGAATGTAATTTTATCGGCGTTTTGGCATGTGTGAAGAATGATAATTTATATTTTCAATATTCAGGATACAGCTT TGCATTGCGTTATTGTCTTGGAATATGGAAGTTTAAAAATGAAAAAGTTTTTGAAAAATTAAAAAAAGAGATAAATCCCG GAATTTTAAAAAACTATCAGGAAAGCCAGGATTTCTGGAAAAAATACGACACCTTTATAGATAAAGGTTTTCACTTTCTG TATGATAATTTCCTGAAATCGAACAATCAAAAAGACGGAATGGAAAGCTACAGCAAGTTTATAGATTTGATGATTAATTA TTATAAAACGAGAAAATTTTAG
Upstream 100 bases:
>100_bases AAGTGATTTGTGTCATTTTTTCCTTATTATTGAATAACAAATTTACAAAAAATAACACTAACTATCTTTTAATTATTATT TTTATACAAACGTAATAACC
Downstream 100 bases:
>100_bases ATTTTTCTGCCACAGATCGCACAGAGTAAAAGGATTTTTATTTTGTATTAAACAACTAAAAGAAATTATAATCTTTTAAC GTGCGTCAAAAAAAATAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MTRKHILPLFLLIQIIFLKVLPFFPDFVEGFYSNNLYIRISHFLRIVLGKIPFSVGDCIYGILIISIISWFWKIRKTWKT EWKDHILKILGKISVYYFLFHVLWAFNYYREPLFQKMEIKREYSDADLLAFTKKLIVRTNEIQFKITKNKNEKIQLPYSQ EEVFKMNLSGYNNLAQEHPYFKYNTLSVKKSLFSVPLTYMGFGGYLNPFTNEAQVNDLLPMYSFPLTASHEMAHQIGFAS ENECNFIGVLACVKNDNLYFQYSGYSFALRYCLGIWKFKNEKVFEKLKKEINPGILKNYQESQDFWKKYDTFIDKGFHFL YDNFLKSNNQKDGMESYSKFIDLMINYYKTRKF
Sequences:
>Translated_353_residues MTRKHILPLFLLIQIIFLKVLPFFPDFVEGFYSNNLYIRISHFLRIVLGKIPFSVGDCIYGILIISIISWFWKIRKTWKT EWKDHILKILGKISVYYFLFHVLWAFNYYREPLFQKMEIKREYSDADLLAFTKKLIVRTNEIQFKITKNKNEKIQLPYSQ EEVFKMNLSGYNNLAQEHPYFKYNTLSVKKSLFSVPLTYMGFGGYLNPFTNEAQVNDLLPMYSFPLTASHEMAHQIGFAS ENECNFIGVLACVKNDNLYFQYSGYSFALRYCLGIWKFKNEKVFEKLKKEINPGILKNYQESQDFWKKYDTFIDKGFHFL YDNFLKSNNQKDGMESYSKFIDLMINYYKTRKF >Mature_352_residues TRKHILPLFLLIQIIFLKVLPFFPDFVEGFYSNNLYIRISHFLRIVLGKIPFSVGDCIYGILIISIISWFWKIRKTWKTE WKDHILKILGKISVYYFLFHVLWAFNYYREPLFQKMEIKREYSDADLLAFTKKLIVRTNEIQFKITKNKNEKIQLPYSQE EVFKMNLSGYNNLAQEHPYFKYNTLSVKKSLFSVPLTYMGFGGYLNPFTNEAQVNDLLPMYSFPLTASHEMAHQIGFASE NECNFIGVLACVKNDNLYFQYSGYSFALRYCLGIWKFKNEKVFEKLKKEINPGILKNYQESQDFWKKYDTFIDKGFHFLY DNFLKSNNQKDGMESYSKFIDLMINYYKTRKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42252; Mature: 42121
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRKHILPLFLLIQIIFLKVLPFFPDFVEGFYSNNLYIRISHFLRIVLGKIPFSVGDCIY CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEHHHHHHHHHHHCCCHHHHHHH GILIISIISWFWKIRKTWKTEWKDHILKILGKISVYYFLFHVLWAFNYYREPLFQKMEIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REYSDADLLAFTKKLIVRTNEIQFKITKNKNEKIQLPYSQEEVFKMNLSGYNNLAQEHPY HHCCCHHHHHHHHHHHHEECCEEEEEECCCCCEEECCCCHHHHHEECCCCCHHHHHCCCC FKYNTLSVKKSLFSVPLTYMGFGGYLNPFTNEAQVNDLLPMYSFPLTASHEMAHQIGFAS EEEEHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHCCHHHCCCCCCCHHHHHHHCCCC ENECNFIGVLACVKNDNLYFQYSGYSFALRYCLGIWKFKNEKVFEKLKKEINPGILKNYQ CCCCCEEEEEEEEECCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCH ESQDFWKKYDTFIDKGFHFLYDNFLKSNNQKDGMESYSKFIDLMINYYKTRKF HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TRKHILPLFLLIQIIFLKVLPFFPDFVEGFYSNNLYIRISHFLRIVLGKIPFSVGDCIY CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEHHHHHHHHHHHCCCHHHHHHH GILIISIISWFWKIRKTWKTEWKDHILKILGKISVYYFLFHVLWAFNYYREPLFQKMEIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REYSDADLLAFTKKLIVRTNEIQFKITKNKNEKIQLPYSQEEVFKMNLSGYNNLAQEHPY HHCCCHHHHHHHHHHHHEECCEEEEEECCCCCEEECCCCHHHHHEECCCCCHHHHHCCCC FKYNTLSVKKSLFSVPLTYMGFGGYLNPFTNEAQVNDLLPMYSFPLTASHEMAHQIGFAS EEEEHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHCCHHHCCCCCCCHHHHHHHCCCC ENECNFIGVLACVKNDNLYFQYSGYSFALRYCLGIWKFKNEKVFEKLKKEINPGILKNYQ CCCCCEEEEEEEEECCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCH ESQDFWKKYDTFIDKGFHFLYDNFLKSNNQKDGMESYSKFIDLMINYYKTRKF HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA