| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300124
Identifier: 146300124
GI number: 146300124
Start: 2839412
End: 2840068
Strand: Reverse
Name: 146300124
Synonym: Fjoh_2369
Alternate gene names: NA
Gene position: 2840068-2839412 (Counterclockwise)
Preceding gene: 146300125
Following gene: 146300123
Centisome position: 46.58
GC content: 36.68
Gene sequence:
>657_bases ATGAACTACTTAAAAATCAGCATTTATTCACTGCTTTTTGCAGTTTTATTGGCGGGCTGTAAGCATCATGAAGAAGCGCG CAGGCCAATTTCCAGAGCTTCGGGGACTTTTATGAAAAAATCAGCCGACAGAAACAAAAAATTAGTAGCCAGCGAAGAAG ATGTGATTAAAAAAATCATCAAAAGCAATCCGAAAGTAAAATATTACGCCACAAAAAAAGGATATTGGTTTAGTTATGAT GAAAAAAATAACACCGAAACCACTGCACCGCGAAAAGGAGATATCGCTTACTTTAATTTAGAAGTTAAAGATATTGAAGG TAAAGTAATTTATTCAGAAGCTGATCTTGGCCCGCAGACTTATTATGTTGACAAACAAGACATCATGATGGGATTACGTG ACGGGATTAAGTACATGAAAAAAAATGAAACTGTTACTTTTCTTTTTCCATCACATATGGCTTATGGATATCATGGAGAT AACAAAAAAATTGGTCCTAATCAGTCTTTGATTTGTACTGTTACCTTAAGAAACTTTGTTCCGGATCCGGCGCAAAGCTC TGTTGCTGCTCCAGCGGCACAAACTAAACCTGCAGCAGCAAAACCTGCTGTTTCAAAACCTGCAGCTCAAACTAAAAAAG ATACATTAAACCCATAA
Upstream 100 bases:
>100_bases GGACACATAAATGCAGCTGGCGGAAGATCTGAAGTTTCAATGGAAGAAACAGTTAAAAAATTCGAAGATTTAGTAACTAA ACTAAAATTATAAAACCAAT
Downstream 100 bases:
>100_bases AAAACGTTTTAAAAAATGAAGAAGATTTTTCTATTGTTATTAGCCGTTAGCTCGTTTTATTCATGCAAGAACGAACACAG TAATCTGCCAGATGGTTTAT
Product: FKBP type peptidyl-prolyl cis-trans isomerase
Products: NA
Alternate protein names: Peptidyl-Prolylisomerase; Peptidylprolyl Isomerase FKBP-Type; Gliding Motility Lipoprotein GldI
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MNYLKISIYSLLFAVLLAGCKHHEEARRPISRASGTFMKKSADRNKKLVASEEDVIKKIIKSNPKVKYYATKKGYWFSYD EKNNTETTAPRKGDIAYFNLEVKDIEGKVIYSEADLGPQTYYVDKQDIMMGLRDGIKYMKKNETVTFLFPSHMAYGYHGD NKKIGPNQSLICTVTLRNFVPDPAQSSVAAPAAQTKPAAAKPAVSKPAAQTKKDTLNP
Sequences:
>Translated_218_residues MNYLKISIYSLLFAVLLAGCKHHEEARRPISRASGTFMKKSADRNKKLVASEEDVIKKIIKSNPKVKYYATKKGYWFSYD EKNNTETTAPRKGDIAYFNLEVKDIEGKVIYSEADLGPQTYYVDKQDIMMGLRDGIKYMKKNETVTFLFPSHMAYGYHGD NKKIGPNQSLICTVTLRNFVPDPAQSSVAAPAAQTKPAAAKPAVSKPAAQTKKDTLNP >Mature_218_residues MNYLKISIYSLLFAVLLAGCKHHEEARRPISRASGTFMKKSADRNKKLVASEEDVIKKIIKSNPKVKYYATKKGYWFSYD EKNNTETTAPRKGDIAYFNLEVKDIEGKVIYSEADLGPQTYYVDKQDIMMGLRDGIKYMKKNETVTFLFPSHMAYGYHGD NKKIGPNQSLICTVTLRNFVPDPAQSSVAAPAAQTKPAAAKPAVSKPAAQTKKDTLNP
Specific function: Unknown
COG id: COG0545
COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24395; Mature: 24395
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50059 FKBP_PPIASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYLKISIYSLLFAVLLAGCKHHEEARRPISRASGTFMKKSADRNKKLVASEEDVIKKII CCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCCCCCEECCHHHHHHHHH KSNPKVKYYATKKGYWFSYDEKNNTETTAPRKGDIAYFNLEVKDIEGKVIYSEADLGPQT HCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCCCCE YYVDKQDIMMGLRDGIKYMKKNETVTFLFPSHMAYGYHGDNKKIGPNQSLICTVTLRNFV EEECHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEEEHHCC PDPAQSSVAAPAAQTKPAAAKPAVSKPAAQTKKDTLNP CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCC >Mature Secondary Structure MNYLKISIYSLLFAVLLAGCKHHEEARRPISRASGTFMKKSADRNKKLVASEEDVIKKII CCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCCCCCEECCHHHHHHHHH KSNPKVKYYATKKGYWFSYDEKNNTETTAPRKGDIAYFNLEVKDIEGKVIYSEADLGPQT HCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCCCCE YYVDKQDIMMGLRDGIKYMKKNETVTFLFPSHMAYGYHGDNKKIGPNQSLICTVTLRNFV EEECHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEEEHHCC PDPAQSSVAAPAAQTKPAAAKPAVSKPAAQTKKDTLNP CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA