Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146300115

Identifier: 146300115

GI number: 146300115

Start: 2831300

End: 2833153

Strand: Reverse

Name: 146300115

Synonym: Fjoh_2360

Alternate gene names: NA

Gene position: 2833153-2831300 (Counterclockwise)

Preceding gene: 146300116

Following gene: 146300112

Centisome position: 46.47

GC content: 32.74

Gene sequence:

>1854_bases
ATGAAAAAAATACTTTACACATTAGCTCTTGCCGTAACGCTTTGGAGCTGTAAAACAGGTAGCACTGCTGGAAAAAGCAA
TGTGGTAGATGTTAATATTAATTTAACTGATGTAAAAGATGATAAGGTTTTAGTAACGGTAACACCGCCAAAAATTAAAA
CAGATGAAATCGTTTACAGCATTCCAAAAACAGTCCCAGGAACGTATTCTACAGACAACTACGGAAAATATTCTGAAGAT
TTTAAAGCATTTGATGTTAAAGGAAATCCTTTAACTGTAAAAAGACTTGACGATAATTCATGGTCTATTTCAAATGCAAA
AGCGCTGGCAAAAATTACCTATTTAGTTAATGATACTTTTGATACTGAAAAAGGAACCGGATTTGGTAATGATGATGTTT
TCTCTCCAGCGGGAACAAATATCAATGCAGGTGTAAATTTCATGGTAAATACACATGGTTTTGTAGGTTATTTTAAAGAT
AATTTAGAAGTTCCTTACAAAGTGACCATTACACATCCTGAAACACTTTGGGGAGCAACTTCAATGACAGATGAAGATGC
AAGCAAAACAAGCGATGTTTTTACAACACCTCGTTATGCGGTATTGGTAGAAAATCCAATTATGTATTCTAAACCAGATT
ATACAACATTTAACGTTAACGGAATGGATATTTTAATTGCGGTTTATTCTCCAACTGGAAAATTTACTGCAGAAAGTATT
ACTCCGGAAATGAAAACAATGATGACGGCTCAGAAAAACTTTTTAGGAAAAGTAAACTCTACTAAAAAATATACCGTTTT
ACTGTACTTATCAAGCATGGCTAAAGACGATGCACACGGTTTTGGAGCTTTAGAACACCCAACAGCAACTACAGTAGTAC
TTCCTGAGACTATGCCGAAAGAAAAACTGGTAGAATCTATGAAAGATGTGGTTTCTCACGAATTCTTTCATATTGTAACT
CCATTAACCATTCACTCAAAAGAAATTCAGTATTTTGATTATAACGCACCAAAAATGTCTGAACATTTATGGATGTATGA
AGGTGTAACAGAGTATTTTGCCAACCTTTTCCAAATTAATCAGGGATTAATTGATGAAGCTGAGTTCTATTCTCGTATTG
CTGATAAAATTGAGCAGGCAAAAACTTTAGATGATACTATGTCATTTACTGTAATGAGTAAAAATGTATTAGAGCAGCCA
TATAAAGATCAATACTTAAATGTATATCAAAAAGGTGCTTTAATAGGTATGTGCATTGACATTATCATTAGAGAAAAAAG
CAACGGAGAAAGAGGGATTCTTGATTTAATGCACAAACTTTCTGAAGAATATGGCGTTAATAAACCATTTAATGATGATG
AGCTTTTTGCTAAAATAACGTCTTTAACTTATCCTGAAGTGGGCGAATTCCTAAACAAATATGTAGCAGGAACTACACCA
ATTCCTTACGATTTTTATCTGGCTAAAGCAGGAGTAACAAAATCAAAAGAAAAAAAGGCAGGTCCAATTTTCTTAAAAGG
TCAAACTCCATACATCACAATTGATAAACAAACAAAAGAAATTGCTGTTCGTTCTGATATTGAACCAAGTGCATTCTTTA
AAAATCTTAACTTAAAAGGAGGCGATAAAATTTTAGCAGTAAACAACAAAGCATATTCTTTAGAAAACATTTATGATCTT
ATTACTGAAAGTGAAAACTGGAAAGAAAATGATCCTATTACTTTAAAAGTAAAACGCGGCGGTAAAGAAGAAACCATAAA
AGGAACCGTTAAACTTCCGTTTGAAGAAACTGAAACTTTTAAAGCGACTGATGCTTCAAAAGACAAAATTAAAAATGCAT
GGTTAAAAGGATAA

Upstream 100 bases:

>100_bases
GATTAAAACTCCTGATTTCGGGAGTTTTTTTTATATTTTTAAATTTATTGTAACTTTTAAACAATTTTTAAGTCCAATAC
ACATAACTAAACATAAACAA

Downstream 100 bases:

>100_bases
TCCTTTCTAACCCATAAAAAAACCGACAAGTGATTGTCGGTTTTTTTTATACTGGAACTTTATTAAGGTTGTCAGGCTGA
GCGAAGTCGAAGCCTTCGCA

Product: peptidase M61 domain-containing protein

Products: NA

Alternate protein names: Peptidase M; Protease; M61 Family Peptidase; M61 Family Glycyl Aminopeptidase; Pdz/Dhr/Glgf; Aminopeptidase N Family Protein; Metallopeptidase; M61 Glycyl Aminopeptidase; Protease With C-Terminal PDZ Domain-Containing Protein; PDZ/DHR/GLGFPeptidase M; Signaling Protein; M61 Glycyl Aminopeptidase Protein; M61 Glycyl Aminopeptidase Family Protein

Number of amino acids: Translated: 617; Mature: 617

Protein sequence:

>617_residues
MKKILYTLALAVTLWSCKTGSTAGKSNVVDVNINLTDVKDDKVLVTVTPPKIKTDEIVYSIPKTVPGTYSTDNYGKYSED
FKAFDVKGNPLTVKRLDDNSWSISNAKALAKITYLVNDTFDTEKGTGFGNDDVFSPAGTNINAGVNFMVNTHGFVGYFKD
NLEVPYKVTITHPETLWGATSMTDEDASKTSDVFTTPRYAVLVENPIMYSKPDYTTFNVNGMDILIAVYSPTGKFTAESI
TPEMKTMMTAQKNFLGKVNSTKKYTVLLYLSSMAKDDAHGFGALEHPTATTVVLPETMPKEKLVESMKDVVSHEFFHIVT
PLTIHSKEIQYFDYNAPKMSEHLWMYEGVTEYFANLFQINQGLIDEAEFYSRIADKIEQAKTLDDTMSFTVMSKNVLEQP
YKDQYLNVYQKGALIGMCIDIIIREKSNGERGILDLMHKLSEEYGVNKPFNDDELFAKITSLTYPEVGEFLNKYVAGTTP
IPYDFYLAKAGVTKSKEKKAGPIFLKGQTPYITIDKQTKEIAVRSDIEPSAFFKNLNLKGGDKILAVNNKAYSLENIYDL
ITESENWKENDPITLKVKRGGKEETIKGTVKLPFEETETFKATDASKDKIKNAWLKG

Sequences:

>Translated_617_residues
MKKILYTLALAVTLWSCKTGSTAGKSNVVDVNINLTDVKDDKVLVTVTPPKIKTDEIVYSIPKTVPGTYSTDNYGKYSED
FKAFDVKGNPLTVKRLDDNSWSISNAKALAKITYLVNDTFDTEKGTGFGNDDVFSPAGTNINAGVNFMVNTHGFVGYFKD
NLEVPYKVTITHPETLWGATSMTDEDASKTSDVFTTPRYAVLVENPIMYSKPDYTTFNVNGMDILIAVYSPTGKFTAESI
TPEMKTMMTAQKNFLGKVNSTKKYTVLLYLSSMAKDDAHGFGALEHPTATTVVLPETMPKEKLVESMKDVVSHEFFHIVT
PLTIHSKEIQYFDYNAPKMSEHLWMYEGVTEYFANLFQINQGLIDEAEFYSRIADKIEQAKTLDDTMSFTVMSKNVLEQP
YKDQYLNVYQKGALIGMCIDIIIREKSNGERGILDLMHKLSEEYGVNKPFNDDELFAKITSLTYPEVGEFLNKYVAGTTP
IPYDFYLAKAGVTKSKEKKAGPIFLKGQTPYITIDKQTKEIAVRSDIEPSAFFKNLNLKGGDKILAVNNKAYSLENIYDL
ITESENWKENDPITLKVKRGGKEETIKGTVKLPFEETETFKATDASKDKIKNAWLKG
>Mature_617_residues
MKKILYTLALAVTLWSCKTGSTAGKSNVVDVNINLTDVKDDKVLVTVTPPKIKTDEIVYSIPKTVPGTYSTDNYGKYSED
FKAFDVKGNPLTVKRLDDNSWSISNAKALAKITYLVNDTFDTEKGTGFGNDDVFSPAGTNINAGVNFMVNTHGFVGYFKD
NLEVPYKVTITHPETLWGATSMTDEDASKTSDVFTTPRYAVLVENPIMYSKPDYTTFNVNGMDILIAVYSPTGKFTAESI
TPEMKTMMTAQKNFLGKVNSTKKYTVLLYLSSMAKDDAHGFGALEHPTATTVVLPETMPKEKLVESMKDVVSHEFFHIVT
PLTIHSKEIQYFDYNAPKMSEHLWMYEGVTEYFANLFQINQGLIDEAEFYSRIADKIEQAKTLDDTMSFTVMSKNVLEQP
YKDQYLNVYQKGALIGMCIDIIIREKSNGERGILDLMHKLSEEYGVNKPFNDDELFAKITSLTYPEVGEFLNKYVAGTTP
IPYDFYLAKAGVTKSKEKKAGPIFLKGQTPYITIDKQTKEIAVRSDIEPSAFFKNLNLKGGDKILAVNNKAYSLENIYDL
ITESENWKENDPITLKVKRGGKEETIKGTVKLPFEETETFKATDASKDKIKNAWLKG

Specific function: Unknown

COG id: COG3975

COG function: function code R; Predicted protease with the C-terminal PDZ domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69180; Mature: 69180

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILYTLALAVTLWSCKTGSTAGKSNVVDVNINLTDVKDDKVLVTVTPPKIKTDEIVYS
CHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCEEEE
IPKTVPGTYSTDNYGKYSEDFKAFDVKGNPLTVKRLDDNSWSISNAKALAKITYLVNDTF
CCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCHHHEEEEEEEEECCC
DTEKGTGFGNDDVFSPAGTNINAGVNFMVNTHGFVGYFKDNLEVPYKVTITHPETLWGAT
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCEEEEEECCHHHCCCC
SMTDEDASKTSDVFTTPRYAVLVENPIMYSKPDYTTFNVNGMDILIAVYSPTGKFTAESI
CCCCCCCCCCCCCCCCCCEEEEEECCEEECCCCCEEEECCCEEEEEEEECCCCCEEHHHC
TPEMKTMMTAQKNFLGKVNSTKKYTVLLYLSSMAKDDAHGFGALEHPTATTVVLPETMPK
CHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEHHCCCCCCCCCCCCCCCEEEEEECCCCCH
EKLVESMKDVVSHEFFHIVTPLTIHSKEIQYFDYNAPKMSEHLWMYEGVTEYFANLFQIN
HHHHHHHHHHHHHCCEEEECCEEEECCEEEEEECCCCCHHHHEEHHHHHHHHHHHHHHHC
QGLIDEAEFYSRIADKIEQAKTLDDTMSFTVMSKNVLEQPYKDQYLNVYQKGALIGMCID
CCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHCCCCHHHHHHHHHCCCHHEEEEE
IIIREKSNGERGILDLMHKLSEEYGVNKPFNDDELFAKITSLTYPEVGEFLNKYVAGTTP
EEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCC
IPYDFYLAKAGVTKSKEKKAGPIFLKGQTPYITIDKQTKEIAVRSDIEPSAFFKNLNLKG
CCCEEEEEECCCCCCCCCCCCCEEEECCCCEEEEECCCCEEEEECCCCHHHHHHCCCCCC
GDKILAVNNKAYSLENIYDLITESENWKENDPITLKVKRGGKEETIKGTVKLPFEETETF
CCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCE
KATDASKDKIKNAWLKG
ECCCCCHHHHHHHCCCC
>Mature Secondary Structure
MKKILYTLALAVTLWSCKTGSTAGKSNVVDVNINLTDVKDDKVLVTVTPPKIKTDEIVYS
CHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCEEEE
IPKTVPGTYSTDNYGKYSEDFKAFDVKGNPLTVKRLDDNSWSISNAKALAKITYLVNDTF
CCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCHHHEEEEEEEEECCC
DTEKGTGFGNDDVFSPAGTNINAGVNFMVNTHGFVGYFKDNLEVPYKVTITHPETLWGAT
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCEEEEEECCHHHCCCC
SMTDEDASKTSDVFTTPRYAVLVENPIMYSKPDYTTFNVNGMDILIAVYSPTGKFTAESI
CCCCCCCCCCCCCCCCCCEEEEEECCEEECCCCCEEEECCCEEEEEEEECCCCCEEHHHC
TPEMKTMMTAQKNFLGKVNSTKKYTVLLYLSSMAKDDAHGFGALEHPTATTVVLPETMPK
CHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEHHCCCCCCCCCCCCCCCEEEEEECCCCCH
EKLVESMKDVVSHEFFHIVTPLTIHSKEIQYFDYNAPKMSEHLWMYEGVTEYFANLFQIN
HHHHHHHHHHHHHCCEEEECCEEEECCEEEEEECCCCCHHHHEEHHHHHHHHHHHHHHHC
QGLIDEAEFYSRIADKIEQAKTLDDTMSFTVMSKNVLEQPYKDQYLNVYQKGALIGMCID
CCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHCCCCHHHHHHHHHCCCHHEEEEE
IIIREKSNGERGILDLMHKLSEEYGVNKPFNDDELFAKITSLTYPEVGEFLNKYVAGTTP
EEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCC
IPYDFYLAKAGVTKSKEKKAGPIFLKGQTPYITIDKQTKEIAVRSDIEPSAFFKNLNLKG
CCCEEEEEECCCCCCCCCCCCCEEEECCCCEEEEECCCCEEEEECCCCHHHHHHCCCCCC
GDKILAVNNKAYSLENIYDLITESENWKENDPITLKVKRGGKEETIKGTVKLPFEETETF
CCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCE
KATDASKDKIKNAWLKG
ECCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA