Click here to switch to the map view.

The map label for this gene is lcrS [H]

Identifier: 146284647

GI number: 146284647

Start: 152280

End: 152546

Strand: Reverse

Name: lcrS [H]

Synonym: Ent638_4321

Alternate gene names: 146284647

Gene position: 152546-152280 (Counterclockwise)

Preceding gene: 146284649

Following gene: 146284646

Centisome position: 96.7

GC content: 49.06

Gene sequence:

>267_bases
ATGCGTAAGATCCGATTCACTGAACACCAGATTATCGCCGTTCTGAAGTCCGTCGAAGCCGGACGAACCGTCAAAGATGT
CTGCCGTGAGGCCGCGATATCTGAAGCCAGCTATTACAACTGGAAGGCCAAGTATGGCGGGATGGAAGCGGCCGATATTA
AAAAGATCAAAGATCTGGAAGACGAGAACCGGCGGCTCAAACAGATGTTTGCCGATCTCAGTCTGGAATGCCGGGCGTTG
AAAGATGTTATCGAAAAAAAGCTTTAA

Upstream 100 bases:

>100_bases
TACTCCTTCTGAAGGTAAAACTGTAAGTATCCCGGCAAAACGGCCCATTCACTTTTAGAGATCTTCCGACATACTGATTA
TGTCACCTGTGGAGATAGCT

Downstream 100 bases:

>100_bases
AACCAGCGATAAAGCGTGAACTCGTCCGCTATCTGACGGCGCATTTTGCCATGAGTTTACGCCAGGCCTGCAGGACGTTA
TCGCTGAGCAGGACGGTATA

Product: transposase IS3/IS911 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MRKIRFTEHQIIAVLKSVEAGRTVKDVCREAAISEASYYNWKAKYGGMEAADIKKIKDLEDENRRLKQMFADLSLECRAL
KDVIEKKL

Sequences:

>Translated_88_residues
MRKIRFTEHQIIAVLKSVEAGRTVKDVCREAAISEASYYNWKAKYGGMEAADIKKIKDLEDENRRLKQMFADLSLECRAL
KDVIEKKL
>Mature_88_residues
MRKIRFTEHQIIAVLKSVEAGRTVKDVCREAAISEASYYNWKAKYGGMEAADIKKIKDLEDENRRLKQMFADLSLECRAL
KDVIEKKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 10206; Mature: 10206

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIRFTEHQIIAVLKSVEAGRTVKDVCREAAISEASYYNWKAKYGGMEAADIKKIKDLE
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHCCC
DENRRLKQMFADLSLECRALKDVIEKKL
HHHHHHHHHHHCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKIRFTEHQIIAVLKSVEAGRTVKDVCREAAISEASYYNWKAKYGGMEAADIKKIKDLE
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHCCC
DENRRLKQMFADLSLECRALKDVIEKKL
HHHHHHHHHHHCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9746557; 9748454; 11586360 [H]