Click here to switch to the map view.

The map label for this gene is sopA [H]

Identifier: 146284576

GI number: 146284576

Start: 79308

End: 80474

Strand: Direct

Name: sopA [H]

Synonym: Ent638_4250

Alternate gene names: 146284576

Gene position: 79308-80474 (Clockwise)

Preceding gene: 146284575

Following gene: 146284577

Centisome position: 50.27

GC content: 45.93

Gene sequence:

>1167_bases
ATGGGATTAATGAATACCCTTGATCAGTGCATTGCTGCTGGCCATGAAATGACAAAAGCCATTGCTGTAGCTCAGTTTAA
TGATGATAGCCCTGAGGCGAGGAAAATTACGCGTCGCTGGCGTGTCGGTGAGGCGGCTGATCTAATTGGTGTGTCATCAC
AAGCAATTAGGGACGCAGAAAAAGCAGGCCGTCTCCCCCACCCCGACATGGAAATGCGTGGGCGGGTTGAACAGAGAGTG
GGTTATACAATCGAGCAAATAAACCATATGCGAGATGTTTTCGGTACACGACTTCGCAGACCAAATGAGAGTGTTCCTCC
TGTCATCGGTGTAGCAGCGCATAAAGGTGGAGTTTACAAAACCTCAGTGTCAGTACATCTGGCACAAGACCTTGCTTTGA
AAGGGCTTCGTGTCCTTCTTGTCGAAGGCAATGACCCGCAAGGAACGGCATCTATGTATCATGGATGGGTTCCAGATTTG
CATATTCACGCTAATGATACATTACTTCCATTCTACCTTGGTGAAAGGGATGATGCTTCCTACGCAATAAAACCAACTTG
CTGGCCAGGGTTGGATATAATTCCTTCCTGTCTTGCATTACATCGTATCGAAACGGAACTTATGGGGCGCTATGACGAGG
GAAAATTACCTACAGAACCTCACATGATGCTTCGCCTCGCAATCGAGACTGTTGCCCAGGACTACGATGTTATCGTTATA
GATAGTGCCCCTAATCTTGGTATAGGAACCATTAACGTTGTTTGTGCGGCAGATGTATTAATCATCCCTACCCCTGCAGA
GCTGTTTGACTATACTTCGGCACTTCAATTTTTTGACATGCTGCGCGACCTTTTGAAGAACGTCGATTTACAGGGTTTTG
AACCAGATGTCAGAATACTATTGACGAAATATAGTAATAACAATGGTTCTCAGTCTCCATGGATGGAAGAGCAAATCCGT
GATGCATGGGGGAGTATGGTTTTGAAAAATGTTGTTCGCGAAACTGACGAAGTCGGAAAGGGTCAGATTCGAATGCGTAC
CGTTTTTGAACAGGCAATTGATCAGCGCTCATCTACAGGTGCATGGCGAAATGCGCTCGCGATTTGGGAGCCAGTTTGCA
ACGAAATATTTGATCGACTGATTAAACCTCGTTGGGAGATTCGTTAA

Upstream 100 bases:

>100_bases
AACTTTGCAGTTTTTAACATGGTTTGCATTTTTAATGTTGCTTTGCTTCTTTTATCAAGATTTAATTGATTGATGCAAAG
TTCATTTTAAGGAACATAAT

Downstream 100 bases:

>100_bases
TGAAACGTGCGCCAATTATTCCAAAGTCTTCCCCTGCAATCACTCCTGCTGCTACCACTGCAGCACCTGCTGCGCCAATG
GTTGATTCATTGATTGCTCG

Product: plasmid-partitioning protein SopA

Products: NA

Alternate protein names: Plasmid partition protein A [H]

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MGLMNTLDQCIAAGHEMTKAIAVAQFNDDSPEARKITRRWRVGEAADLIGVSSQAIRDAEKAGRLPHPDMEMRGRVEQRV
GYTIEQINHMRDVFGTRLRRPNESVPPVIGVAAHKGGVYKTSVSVHLAQDLALKGLRVLLVEGNDPQGTASMYHGWVPDL
HIHANDTLLPFYLGERDDASYAIKPTCWPGLDIIPSCLALHRIETELMGRYDEGKLPTEPHMMLRLAIETVAQDYDVIVI
DSAPNLGIGTINVVCAADVLIIPTPAELFDYTSALQFFDMLRDLLKNVDLQGFEPDVRILLTKYSNNNGSQSPWMEEQIR
DAWGSMVLKNVVRETDEVGKGQIRMRTVFEQAIDQRSSTGAWRNALAIWEPVCNEIFDRLIKPRWEIR

Sequences:

>Translated_388_residues
MGLMNTLDQCIAAGHEMTKAIAVAQFNDDSPEARKITRRWRVGEAADLIGVSSQAIRDAEKAGRLPHPDMEMRGRVEQRV
GYTIEQINHMRDVFGTRLRRPNESVPPVIGVAAHKGGVYKTSVSVHLAQDLALKGLRVLLVEGNDPQGTASMYHGWVPDL
HIHANDTLLPFYLGERDDASYAIKPTCWPGLDIIPSCLALHRIETELMGRYDEGKLPTEPHMMLRLAIETVAQDYDVIVI
DSAPNLGIGTINVVCAADVLIIPTPAELFDYTSALQFFDMLRDLLKNVDLQGFEPDVRILLTKYSNNNGSQSPWMEEQIR
DAWGSMVLKNVVRETDEVGKGQIRMRTVFEQAIDQRSSTGAWRNALAIWEPVCNEIFDRLIKPRWEIR
>Mature_387_residues
GLMNTLDQCIAAGHEMTKAIAVAQFNDDSPEARKITRRWRVGEAADLIGVSSQAIRDAEKAGRLPHPDMEMRGRVEQRVG
YTIEQINHMRDVFGTRLRRPNESVPPVIGVAAHKGGVYKTSVSVHLAQDLALKGLRVLLVEGNDPQGTASMYHGWVPDLH
IHANDTLLPFYLGERDDASYAIKPTCWPGLDIIPSCLALHRIETELMGRYDEGKLPTEPHMMLRLAIETVAQDYDVIVID
SAPNLGIGTINVVCAADVLIIPTPAELFDYTSALQFFDMLRDLLKNVDLQGFEPDVRILLTKYSNNNGSQSPWMEEQIRD
AWGSMVLKNVVRETDEVGKGQIRMRTVFEQAIDQRSSTGAWRNALAIWEPVCNEIFDRLIKPRWEIR

Specific function: This protein is essential for plasmid partition. It ensures the proper distribution of newly replicated plasmids to daughter cells during cell division. SopA is trans-acting [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 43564; Mature: 43433

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLMNTLDQCIAAGHEMTKAIAVAQFNDDSPEARKITRRWRVGEAADLIGVSSQAIRDAE
CCHHHHHHHHHHCCHHHHHHHEEEECCCCCHHHHHHHHHHCCCCHHHHHCCCHHHHHHHH
KAGRLPHPDMEMRGRVEQRVGYTIEQINHMRDVFGTRLRRPNESVPPVIGVAAHKGGVYK
HCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEE
TSVSVHLAQDLALKGLRVLLVEGNDPQGTASMYHGWVPDLHIHANDTLLPFYLGERDDAS
EEEEHHHHHHHHHCCEEEEEEECCCCCCCHHHHCCCCCCEEEECCCCEEEEEECCCCCCC
YAIKPTCWPGLDIIPSCLALHRIETELMGRYDEGKLPTEPHMMLRLAIETVAQDYDVIVI
EEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
DSAPNLGIGTINVVCAADVLIIPTPAELFDYTSALQFFDMLRDLLKNVDLQGFEPDVRIL
CCCCCCCCCCEEHEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
LTKYSNNNGSQSPWMEEQIRDAWGSMVLKNVVRETDEVGKGQIRMRTVFEQAIDQRSSTG
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC
AWRNALAIWEPVCNEIFDRLIKPRWEIR
HHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GLMNTLDQCIAAGHEMTKAIAVAQFNDDSPEARKITRRWRVGEAADLIGVSSQAIRDAE
CHHHHHHHHHHCCHHHHHHHEEEECCCCCHHHHHHHHHHCCCCHHHHHCCCHHHHHHHH
KAGRLPHPDMEMRGRVEQRVGYTIEQINHMRDVFGTRLRRPNESVPPVIGVAAHKGGVYK
HCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEE
TSVSVHLAQDLALKGLRVLLVEGNDPQGTASMYHGWVPDLHIHANDTLLPFYLGERDDAS
EEEEHHHHHHHHHCCEEEEEEECCCCCCCHHHHCCCCCCEEEECCCCEEEEEECCCCCCC
YAIKPTCWPGLDIIPSCLALHRIETELMGRYDEGKLPTEPHMMLRLAIETVAQDYDVIVI
EEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
DSAPNLGIGTINVVCAADVLIIPTPAELFDYTSALQFFDMLRDLLKNVDLQGFEPDVRIL
CCCCCCCCCCEEHEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
LTKYSNNNGSQSPWMEEQIRDAWGSMVLKNVVRETDEVGKGQIRMRTVFEQAIDQRSSTG
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC
AWRNALAIWEPVCNEIFDRLIKPRWEIR
HHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9722640; 9628576 [H]