Definition | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence. |
---|---|
Accession | NC_009350 |
Length | 155,098 |
Click here to switch to the map view.
The map label for this gene is X [H]
Identifier: 145301508
GI number: 145301508
Start: 127437
End: 127877
Strand: Direct
Name: X [H]
Synonym: ASA_P5G130
Alternate gene names: 145301508
Gene position: 127437-127877 (Clockwise)
Preceding gene: 145301506
Following gene: 145301516
Centisome position: 82.17
GC content: 47.17
Gene sequence:
>441_bases ATGGCTGCCGATTGTTTCGATATGGCGGGGCAGGCTTACCGTATTGATCCTGATTTACTACGCGCAACAGCCTTTCGTGA ATCCAGTTTTAACCCCCGCGCCTTGAATGTCGTCTCTGATAAAAAATATGCCGTTGGATTAATGCAAATTCATTCCCAGC ACTTCGCCAAATTGGCACAATTCGGGATCACGCCAATGGGTCTATACAATGATCCTTGTTTGAATATCTACACGGGAGCC TATTACATGGCACACGCCATTAAACGGATGGGGTATAATTGGGACGCGGTAGGGGCTTACTATGCTGGATTTTCCACATC AGCCAAGCAGGCAGAAAAACGTAAATGGTACGCCGAACGGGTCAAGCTCACGTATGACGAGATCAAAAAAGGCCCCAAAC ATCAGGGGCCAAATAACAGCAAGGGAAGCAAACCTGATTAA
Upstream 100 bases:
>100_bases TTGCTAGCCATCTCATTTACTGGCAAAATGGTTGCCTTGTTTAAGGGGGATGCGATGAATAGATGGTTGCCGCTGGTCAT TGTTGCTAAGTCCCGCCGTC
Downstream 100 bases:
>100_bases TCTAATGCGCTAAAAATCAAACTATGCTCTTCTAACGTCAATGCATATTCACGAAGTGCGTGATAGAGTCTTACAAAGAG ATCATCGTCTGTCATTTCCC
Product: X protein
Products: NA
Alternate protein names: ORF 19; ORF169; P19 protein [H]
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MAADCFDMAGQAYRIDPDLLRATAFRESSFNPRALNVVSDKKYAVGLMQIHSQHFAKLAQFGITPMGLYNDPCLNIYTGA YYMAHAIKRMGYNWDAVGAYYAGFSTSAKQAEKRKWYAERVKLTYDEIKKGPKHQGPNNSKGSKPD
Sequences:
>Translated_146_residues MAADCFDMAGQAYRIDPDLLRATAFRESSFNPRALNVVSDKKYAVGLMQIHSQHFAKLAQFGITPMGLYNDPCLNIYTGA YYMAHAIKRMGYNWDAVGAYYAGFSTSAKQAEKRKWYAERVKLTYDEIKKGPKHQGPNNSKGSKPD >Mature_145_residues AADCFDMAGQAYRIDPDLLRATAFRESSFNPRALNVVSDKKYAVGLMQIHSQHFAKLAQFGITPMGLYNDPCLNIYTGAY YMAHAIKRMGYNWDAVGAYYAGFSTSAKQAEKRKWYAERVKLTYDEIKKGPKHQGPNNSKGSKPD
Specific function: Unknown
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iagB/ipgF/P19 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008258 [H]
Pfam domain/function: PF01464 SLT [H]
EC number: NA
Molecular weight: Translated: 16430; Mature: 16299
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAADCFDMAGQAYRIDPDLLRATAFRESSFNPRALNVVSDKKYAVGLMQIHSQHFAKLAQ CCCCCHHHCCCEEECCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH FGITPMGLYNDPCLNIYTGAYYMAHAIKRMGYNWDAVGAYYAGFSTSAKQAEKRKWYAER HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHH VKLTYDEIKKGPKHQGPNNSKGSKPD HHCCHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure AADCFDMAGQAYRIDPDLLRATAFRESSFNPRALNVVSDKKYAVGLMQIHSQHFAKLAQ CCCCHHHCCCEEECCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH FGITPMGLYNDPCLNIYTGAYYMAHAIKRMGYNWDAVGAYYAGFSTSAKQAEKRKWYAER HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHH VKLTYDEIKKGPKHQGPNNSKGSKPD HHCCHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2837741; 1645338 [H]