Definition | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence. |
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Accession | NC_009350 |
Length | 155,098 |
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The map label for this gene is yecA [C]
Identifier: 145301501
GI number: 145301501
Start: 115698
End: 116237
Strand: Reverse
Name: yecA [C]
Synonym: ASA_P5G123
Alternate gene names: 145301501
Gene position: 116237-115698 (Counterclockwise)
Preceding gene: 145301502
Following gene: 145301496
Centisome position: 74.94
GC content: 49.44
Gene sequence:
>540_bases TTGCCACATGTTTTCGGGGAAGCGCATTTTTTTGACAACCATGACCAAGCCTCCGAGATCCTTGGTTTGGTCATGCGACA CTGGAACACCATTGCATCGGCGTTGTTTTTGACTCTGGAAAAGGACGATGTATACCTGCCAGTGCTACTTGAAGATGCGG ATGGACTCGTGCGTGGCAACGACTGGGCACATGGTTTCATGCGAGGCACTCGATTAAGACCTTATAGTTGGCAAGAGCTG ATCGATAGTGAAGAATTCGGCGGAGCGATGCTACCAATCATGTTCTTGACCCATGAACATGATCCAGATCCAACCATGCG TTCGCCAGAAATAACACCAGATAAACGCAATGAGTTGTTGATGATGATGATTGCGGGGATGACACACATCTATCGTTACT TCTCATCACATCGGCAATTGACCGTGAAAGAGCCTATACGCAGGCTGGGCCGCAAGGTTGGGAGAAACGAATTGTGCCCG TGTGGCAGTGGGCGAAAGTACAAGCATTGCTGCGCTCCCAACGCCTCGAAGTTTCATTGA
Upstream 100 bases:
>100_bases TGCTGAGCAGTTTCCTCGAAGGCGCAGGGGCGTCAGCAATGAACATCGAAATGCTTGATGGGTTCTTTGCCGCGCTGATA CAGTCCTGCCCAGCGAATAC
Downstream 100 bases:
>100_bases TGTGGGCTTAAGTGACTTCCCTGTTCCATTGCTCCCCGAACCCCTAGGACCAATGCCTTTTAGTTTCATCAGTTGCTGGC TTCGGGGATCTCGGCGCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: SecA Translocase Subunit; YgfB And YecA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MPHVFGEAHFFDNHDQASEILGLVMRHWNTIASALFLTLEKDDVYLPVLLEDADGLVRGNDWAHGFMRGTRLRPYSWQEL IDSEEFGGAMLPIMFLTHEHDPDPTMRSPEITPDKRNELLMMMIAGMTHIYRYFSSHRQLTVKEPIRRLGRKVGRNELCP CGSGRKYKHCCAPNASKFH
Sequences:
>Translated_179_residues MPHVFGEAHFFDNHDQASEILGLVMRHWNTIASALFLTLEKDDVYLPVLLEDADGLVRGNDWAHGFMRGTRLRPYSWQEL IDSEEFGGAMLPIMFLTHEHDPDPTMRSPEITPDKRNELLMMMIAGMTHIYRYFSSHRQLTVKEPIRRLGRKVGRNELCP CGSGRKYKHCCAPNASKFH >Mature_178_residues PHVFGEAHFFDNHDQASEILGLVMRHWNTIASALFLTLEKDDVYLPVLLEDADGLVRGNDWAHGFMRGTRLRPYSWQELI DSEEFGGAMLPIMFLTHEHDPDPTMRSPEITPDKRNELLMMMIAGMTHIYRYFSSHRQLTVKEPIRRLGRKVGRNELCPC GSGRKYKHCCAPNASKFH
Specific function: Unknown
COG id: COG3318
COG function: function code R; Predicted metal-binding protein related to the C-terminal domain of SecA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20668; Mature: 20537
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHVFGEAHFFDNHDQASEILGLVMRHWNTIASALFLTLEKDDVYLPVLLEDADGLVRGN CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEEECCCCCEECC DWAHGFMRGTRLRPYSWQELIDSEEFGGAMLPIMFLTHEHDPDPTMRSPEITPDKRNELL CHHHHHHCCCCCCCCCHHHHHCCHHCCCHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHH MMMIAGMTHIYRYFSSHRQLTVKEPIRRLGRKVGRNELCPCGSGRKYKHCCAPNASKFH HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PHVFGEAHFFDNHDQASEILGLVMRHWNTIASALFLTLEKDDVYLPVLLEDADGLVRGN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEEECCCCCEECC DWAHGFMRGTRLRPYSWQELIDSEEFGGAMLPIMFLTHEHDPDPTMRSPEITPDKRNELL CHHHHHHCCCCCCCCCHHHHHCCHHCCCHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHH MMMIAGMTHIYRYFSSHRQLTVKEPIRRLGRKVGRNELCPCGSGRKYKHCCAPNASKFH HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA