Definition Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence.
Accession NC_009350
Length 155,098

Click here to switch to the map view.

The map label for this gene is yecA [C]

Identifier: 145301501

GI number: 145301501

Start: 115698

End: 116237

Strand: Reverse

Name: yecA [C]

Synonym: ASA_P5G123

Alternate gene names: 145301501

Gene position: 116237-115698 (Counterclockwise)

Preceding gene: 145301502

Following gene: 145301496

Centisome position: 74.94

GC content: 49.44

Gene sequence:

>540_bases
TTGCCACATGTTTTCGGGGAAGCGCATTTTTTTGACAACCATGACCAAGCCTCCGAGATCCTTGGTTTGGTCATGCGACA
CTGGAACACCATTGCATCGGCGTTGTTTTTGACTCTGGAAAAGGACGATGTATACCTGCCAGTGCTACTTGAAGATGCGG
ATGGACTCGTGCGTGGCAACGACTGGGCACATGGTTTCATGCGAGGCACTCGATTAAGACCTTATAGTTGGCAAGAGCTG
ATCGATAGTGAAGAATTCGGCGGAGCGATGCTACCAATCATGTTCTTGACCCATGAACATGATCCAGATCCAACCATGCG
TTCGCCAGAAATAACACCAGATAAACGCAATGAGTTGTTGATGATGATGATTGCGGGGATGACACACATCTATCGTTACT
TCTCATCACATCGGCAATTGACCGTGAAAGAGCCTATACGCAGGCTGGGCCGCAAGGTTGGGAGAAACGAATTGTGCCCG
TGTGGCAGTGGGCGAAAGTACAAGCATTGCTGCGCTCCCAACGCCTCGAAGTTTCATTGA

Upstream 100 bases:

>100_bases
TGCTGAGCAGTTTCCTCGAAGGCGCAGGGGCGTCAGCAATGAACATCGAAATGCTTGATGGGTTCTTTGCCGCGCTGATA
CAGTCCTGCCCAGCGAATAC

Downstream 100 bases:

>100_bases
TGTGGGCTTAAGTGACTTCCCTGTTCCATTGCTCCCCGAACCCCTAGGACCAATGCCTTTTAGTTTCATCAGTTGCTGGC
TTCGGGGATCTCGGCGCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: SecA Translocase Subunit; YgfB And YecA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MPHVFGEAHFFDNHDQASEILGLVMRHWNTIASALFLTLEKDDVYLPVLLEDADGLVRGNDWAHGFMRGTRLRPYSWQEL
IDSEEFGGAMLPIMFLTHEHDPDPTMRSPEITPDKRNELLMMMIAGMTHIYRYFSSHRQLTVKEPIRRLGRKVGRNELCP
CGSGRKYKHCCAPNASKFH

Sequences:

>Translated_179_residues
MPHVFGEAHFFDNHDQASEILGLVMRHWNTIASALFLTLEKDDVYLPVLLEDADGLVRGNDWAHGFMRGTRLRPYSWQEL
IDSEEFGGAMLPIMFLTHEHDPDPTMRSPEITPDKRNELLMMMIAGMTHIYRYFSSHRQLTVKEPIRRLGRKVGRNELCP
CGSGRKYKHCCAPNASKFH
>Mature_178_residues
PHVFGEAHFFDNHDQASEILGLVMRHWNTIASALFLTLEKDDVYLPVLLEDADGLVRGNDWAHGFMRGTRLRPYSWQELI
DSEEFGGAMLPIMFLTHEHDPDPTMRSPEITPDKRNELLMMMIAGMTHIYRYFSSHRQLTVKEPIRRLGRKVGRNELCPC
GSGRKYKHCCAPNASKFH

Specific function: Unknown

COG id: COG3318

COG function: function code R; Predicted metal-binding protein related to the C-terminal domain of SecA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20668; Mature: 20537

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHVFGEAHFFDNHDQASEILGLVMRHWNTIASALFLTLEKDDVYLPVLLEDADGLVRGN
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEEECCCCCEECC
DWAHGFMRGTRLRPYSWQELIDSEEFGGAMLPIMFLTHEHDPDPTMRSPEITPDKRNELL
CHHHHHHCCCCCCCCCHHHHHCCHHCCCHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHH
MMMIAGMTHIYRYFSSHRQLTVKEPIRRLGRKVGRNELCPCGSGRKYKHCCAPNASKFH
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PHVFGEAHFFDNHDQASEILGLVMRHWNTIASALFLTLEKDDVYLPVLLEDADGLVRGN
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEEECCCCCEECC
DWAHGFMRGTRLRPYSWQELIDSEEFGGAMLPIMFLTHEHDPDPTMRSPEITPDKRNELL
CHHHHHHCCCCCCCCCHHHHHCCHHCCCHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHH
MMMIAGMTHIYRYFSSHRQLTVKEPIRRLGRKVGRNELCPCGSGRKYKHCCAPNASKFH
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA