Definition | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence. |
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Accession | NC_009350 |
Length | 155,098 |
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The map label for this gene is 145301496
Identifier: 145301496
GI number: 145301496
Start: 110089
End: 111015
Strand: Reverse
Name: 145301496
Synonym: ASA_P5G117
Alternate gene names: NA
Gene position: 111015-110089 (Counterclockwise)
Preceding gene: 145301501
Following gene: 145301493
Centisome position: 71.58
GC content: 51.78
Gene sequence:
>927_bases ATGGAGTTTAGATATCCCACTGCCTCTGCAGAGGCCAACATGAATGCGATGAAGTACCTGACTCAAAATTTGAGCGCACC TGAAAAAGGGCGAGAAGAGGTTGAGTCTCTGATCAAGATGCTGGGCACTTCCATCACAAGCTATCCATCATGGCACCCGA TCCTGACCATCCCCAGAGGCCAGGGGGAGGATCATGGAGATTTGGGTCGTCTATACACAGGGATTGACCACACTATCAAG TTTGTCAGGGGGTTTGTGACCTGCCCCTACAGCGAGGAGAAGGCGAATGCATTGGTAGATTATGTCAACACGCTGACAGG GTTAAGTGCATATCGGACAGATACGAAGCTGTATAGCGATCATGCTTACCCAGTGGTTGTTGAAGCCATGGAGGTCATGC TGGAGGCTGATGGAACCATTCGCAGCAGGGATGCGCTCGCCTGGTGTGTGCAGGAGTTGGTTAGGAACGCACAGCATGCG CAAGTCGCAGAAACATGGTGGAGCATGAGAGGTTACCTGTTGGGTGAGCCTCATGGTTCACGCTCATCATTGCTGGTCAA TCAGTACACCGGTGGGCATATGCGAAAGATCTTGGAGGCGTTAAATAACAGCGGCATGTATGGCCCTGTTAAGGAGTGGT CGCTGGATATGCTCTCCAAGAAAAAGCGGGAGCTCATTGGGGAAACGCTGCTGCGTGCGGCACTGAAGCAGTATGAAAAG GGTGGCGAGAAATTTACGTTTGAACTCAATGGTGAGCGCTGTAAAGCGTCAGTGGGGGATACCTGGAATGATGGCAGTGA GCTGTCGGTCAACGTCATGATCGGGGCCTCGGAGTTGGTGGTCAACGGTTTTTATTACCCTGGGCAGGATCTCCTCCAGT CATCCGATCCAAAGGGCAAACAAGCGCTGGCTGAGAAGTTTTTATGA
Upstream 100 bases:
>100_bases GAGCGAGGCTGCAGACCCAAGGCATAAAACGCATTGACATTGGTTTTCGTGAGATCAACAGTTTTCGTGAATAACATACT TTACGTGGAGTGGTTTTGTT
Downstream 100 bases:
>100_bases GCGTTGAGTTCACAACCAGACCATCAAAGGAGCCCCGTATAGTGGGCTCGATATCGACGGCTACTCAGGTTTCAACCGCG CAACCTGATCCTGGTGGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MEFRYPTASAEANMNAMKYLTQNLSAPEKGREEVESLIKMLGTSITSYPSWHPILTIPRGQGEDHGDLGRLYTGIDHTIK FVRGFVTCPYSEEKANALVDYVNTLTGLSAYRTDTKLYSDHAYPVVVEAMEVMLEADGTIRSRDALAWCVQELVRNAQHA QVAETWWSMRGYLLGEPHGSRSSLLVNQYTGGHMRKILEALNNSGMYGPVKEWSLDMLSKKKRELIGETLLRAALKQYEK GGEKFTFELNGERCKASVGDTWNDGSELSVNVMIGASELVVNGFYYPGQDLLQSSDPKGKQALAEKFL
Sequences:
>Translated_308_residues MEFRYPTASAEANMNAMKYLTQNLSAPEKGREEVESLIKMLGTSITSYPSWHPILTIPRGQGEDHGDLGRLYTGIDHTIK FVRGFVTCPYSEEKANALVDYVNTLTGLSAYRTDTKLYSDHAYPVVVEAMEVMLEADGTIRSRDALAWCVQELVRNAQHA QVAETWWSMRGYLLGEPHGSRSSLLVNQYTGGHMRKILEALNNSGMYGPVKEWSLDMLSKKKRELIGETLLRAALKQYEK GGEKFTFELNGERCKASVGDTWNDGSELSVNVMIGASELVVNGFYYPGQDLLQSSDPKGKQALAEKFL >Mature_308_residues MEFRYPTASAEANMNAMKYLTQNLSAPEKGREEVESLIKMLGTSITSYPSWHPILTIPRGQGEDHGDLGRLYTGIDHTIK FVRGFVTCPYSEEKANALVDYVNTLTGLSAYRTDTKLYSDHAYPVVVEAMEVMLEADGTIRSRDALAWCVQELVRNAQHA QVAETWWSMRGYLLGEPHGSRSSLLVNQYTGGHMRKILEALNNSGMYGPVKEWSLDMLSKKKRELIGETLLRAALKQYEK GGEKFTFELNGERCKASVGDTWNDGSELSVNVMIGASELVVNGFYYPGQDLLQSSDPKGKQALAEKFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34409; Mature: 34409
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFRYPTASAEANMNAMKYLTQNLSAPEKGREEVESLIKMLGTSITSYPSWHPILTIPRG CCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCEEEECCC QGEDHGDLGRLYTGIDHTIKFVRGFVTCPYSEEKANALVDYVNTLTGLSAYRTDTKLYSD CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHCCHHHHCC HAYPVVVEAMEVMLEADGTIRSRDALAWCVQELVRNAQHAQVAETWWSMRGYLLGEPHGS CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCC RSSLLVNQYTGGHMRKILEALNNSGMYGPVKEWSLDMLSKKKRELIGETLLRAALKQYEK CCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GGEKFTFELNGERCKASVGDTWNDGSELSVNVMIGASELVVNGFYYPGQDLLQSSDPKGK CCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCHHHHEECCCCCCHHHHHCCCCCHH QALAEKFL HHHHHHCC >Mature Secondary Structure MEFRYPTASAEANMNAMKYLTQNLSAPEKGREEVESLIKMLGTSITSYPSWHPILTIPRG CCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCEEEECCC QGEDHGDLGRLYTGIDHTIKFVRGFVTCPYSEEKANALVDYVNTLTGLSAYRTDTKLYSD CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHCCHHHHCC HAYPVVVEAMEVMLEADGTIRSRDALAWCVQELVRNAQHAQVAETWWSMRGYLLGEPHGS CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCC RSSLLVNQYTGGHMRKILEALNNSGMYGPVKEWSLDMLSKKKRELIGETLLRAALKQYEK CCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GGEKFTFELNGERCKASVGDTWNDGSELSVNVMIGASELVVNGFYYPGQDLLQSSDPKGK CCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCHHHHEECCCCCCHHHHHCCCCCHH QALAEKFL HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA